Item | Value |
---|---|
gene id | G101823 |
gene name | NA |
gene type | non-coding |
species | eurasian perch (Perca fluviatilis) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_053120.1 |
NCBI id | CM020917.1 |
chromosome length | 41568296 |
location | 40486791 ~ 40487021 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU137125 | True | 231 | lncRNA | 0.46 | 1 | 40486791 | 40487021 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
gabrb3 | gabrb3,LOC106914751,LOC103365202 | coding | upstream | 182 | 40417993 ~ 40486609 (+) |
oca2 | oca2 | coding | upstream | 226540 | 40206026 ~ 40260251 (+) |
herc2 | LOC103356925 | coding | upstream | 289553 | 40139433 ~ 40197238 (+) |
cyfip1 | cyfip1 | coding | upstream | 360845 | 40072042 ~ 40125946 (+) |
tubgcp5 | tubgcp5 | coding | upstream | 417142 | 40052317 ~ 40069649 (+) |
ube3a | ube3a,LOC103365788 | coding | downstream | 80926 | 40567947 ~ 40582064 (+) |
tmem131 | NA | coding | downstream | 116513 | 40603534 ~ 40637684 (+) |
LOC120564870 | bivm | coding | downstream | 156938 | 40643959 ~ 40650830 (+) |
nme7 | nme7 | coding | downstream | 170825 | 40657846 ~ 40683242 (+) |
dpt | dpt | coding | downstream | 228912 | 40715933 ~ 40722835 (+) |
G101796 | NA | non-coding | upstream | 226182 | 40260363 ~ 40260609 (+) |
G101688 | NA | non-coding | upstream | 351291 | 40135207 ~ 40135500 (+) |
G101687 | nipa1,LOC102781059 | non-coding | upstream | 353437 | 40129801 ~ 40133354 (+) |
LOC120565265 | NA | non-coding | upstream | 441285 | 40044182 ~ 40045506 (+) |
G101666 | NA | non-coding | upstream | 468098 | 39984470 ~ 40018693 (+) |
G101831 | NA | non-coding | downstream | 20479 | 40507500 ~ 40507759 (+) |
G101832 | NA | non-coding | downstream | 21870 | 40508891 ~ 40509367 (+) |
G101990 | NA | non-coding | downstream | 373016 | 40860037 ~ 40940317 (+) |
G102006 | NA | non-coding | downstream | 624552 | 41111573 ~ 41114235 (+) |
G102021 | NA | non-coding | downstream | 667901 | 41154922 ~ 41156467 (+) |
LOC120565298 | cdkl5,LOC103356958 | other | upstream | 746514 | 39693912 ~ 39740277 (+) |
reps2 | reps2,LOC102792668 | other | upstream | 894029 | 39561061 ~ 39592762 (+) |
LOC120565708 | LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 | other | upstream | 1022341 | 39454120 ~ 39464450 (+) |
prdm5 | prdm5 | other | upstream | 1125058 | 39323584 ~ 39361733 (+) |
usp46 | usp46 | other | upstream | 1606186 | 38866435 ~ 38880605 (+) |
atp10a | atp10a | other | downstream | 28072 | 40515093 ~ 40559895 (+) |
G102165 | NA | other | downstream | 965653 | 41452674 ~ 41453306 (+) |