LOC120564863


Basic Information

Item Value
gene id LOC120564863
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 28111585 ~ 28127231 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810098.1
TTTAATGTACCGGATTTCATGAGACCGCCTGAAGAAAATACGCCACTGTTGGTGCTTTTAAAGTGTGTTTATAGATTCATTGTAAACATCGAGACCAGCGTGATGGCAATGCGAACAGCGCGACAGAGGAGCCAGCTGCCAACCTGCTACTATGAGGGATACCTGGAGAAGAGGTCGTTCGAAGATAAGacATCCCGAAAACTGTGGACCAGCCTGTGTGGAAACACGCTGTTCTTCTTCAATGACATGAGAGACACCGGTTACATAGAGAAAGTGGATCTCAGTGGATTTATCTCAATAACGGACGACGGCAGCCAGGATCGTAACTTGGATGCAGCCAGATTCATCCTCCAGATGAAGGACATACATGTCAAATTCACTGCTTCTAACGCAGAGTCTCGGGAGCTGTGGAAGGGCTATATCCAATCTGTGGCTGAGTTGTCGGTACCATCCTCCCTCACCCTGCTACCAGGCCAGATCCACATGCTGAAAGAGGCAGTAGAaaaggagaaggaaagaaaaagaaatgtcgCTCAACCTGCTGAACTCACCCACTGTGCTTACACCAGCCTCCAAGCAGACATGCCAGCTTGTTACCACCGTGTGTCCCGTCTGGAGGCAGAGCTGCTGCTTGAGAAAGAGGCCGAGAAGGGAAACCTCCTGCTGAGGCCCGGGAGTAACGGAACCACCTTCGCTGTCAGCACCAGACAGGACCTTGaaggCTCCGTGTTCAGACACTACCGTGTGACTCGTAAACCTGAAGGGGGCTTCGCCATTGACGTGGACGTTCCTGTCCCATGTGCCACGCTACATGATGTGATCAACTATTTAGTGGAAAAAACGGACGGAGTTCTGATTCCTCTGATCATTGAGGAAGCCTATGATAAAAACATCACTTTTATTCGGACTGATAATGACAATGGAGAGATGAGCATTCGGCGTGCCTCGTCAAACCTCATCCCACCAAGTTTACCCTCCAAACCAGtCGCTCTAAGAGTACCGACTCCTAAACCAGCGCCAGCACCAATTGAAGAAAATAATTTGTATCAGAATGAAGAGCTGGAGGAGAAAGACAACGAGACAGAGGATTCCTCAGCTGTTCCAGTAGCACGTAAGTCTTTCCCCGTCTTATCTTTCCATCTCAGGAACTCCACTGTTCCCTTTACGAACGTGAATCATTGTGTATTTTTGGTCTTCCACAGAACCGGAGACAAACAAACTAAAGAAAGCAGTAAGGCCTCCAGCTCCTGTTCCTCGCAAATTGCCCTTTTCTACATCACCCCtgtcctcctccaccaccaccaccacccaggCTGGTTCTACCTCCACAAACAGCCTGCATTTGAGGATGAGAAACCCCACAGACCCTCTGGGACCGACAATATCGGAGCTGAAACTCAAGTTTGGACAAAAGGCCAGGTGTTAAGAGTGTCCTCTGCTGCTGGGAACCTCTCAAAGcctctgggaaaaaaaacaaatcagcaaCAACCAGTGACTCACACCAGTACAGAGAGCCATTTACCAGTCTGTCCCAGCAAGATGTACCAACACATGgtagctttccacacaaacaacctctttcctcctctgcgCCTGGGATCTGCTCCTCCTCGTCAGCTGGCTGTTGGCAGTAAAGCCTCTCCGAAGATTAACACTTCATTGATTCCCCCATCTCAGACGCTCATTAGCAAATGAATCAAGTGTAACGAGGGGTGTACCTGTCACATTATCCTCACCCTGtttcttttgtatatattttcacatagctaatttatatatatatattgtaaaacATGTATTACTGCCCATCTATACAGTGAAATGTGaatgaaagaaaacagaaattaGAGTGGGCTTGGGGTTTCTGTACCCATTGtattcaaatataatttttcaGTGAAGTAACTCTTTTGCTTTTGTCACATTCAATCAGATACATGTGACCAAGCAACATCTACGTATGTGCCATGCACTGCAGCAGTATCAGTTTTATGATGTTCTGTACCTGTCTATTTCCTGTtacaactgtttttattttttaaatcaagtcaAAATTTG
>XM_039810099.1
TTTAATGTACCGGATTTCATGAGACCGCCTGAAGAAAATACGCCACTGTTGGTGCTTTTAAAGTGTGTTTATAGATTCATTGTAAACATCGAGACCAGCGTGATGGCAATGCGAACAGCGCGACAGAGGAGCCAGCTGCCAACCTGCTACTATGAGGGATACCTGGAGAAGAGGTCGTTCGAAGATAAGacATCCCGAAAACTGTGGACCAGCCTGTGTGGAAACACGCTGTTCTTCTTCAATGACATGAGAGACACCGGTTACATAGAGAAAGTGGATCTCAGTGGATTTATCTCAATAACGGACGACGGCAGCCAGGATCGTAACTTGGATGCAGCCAGATTCATCCTCCAGATGAAGGACATACATGTCAAATTCACTGCTTCTAACGCAGAGTCTCGGGAGCTGTGGAAGGGCTATATCCAATCTGTGGCTGAGTTGTCGGTACCATCCTCCCTCACCCTGCTACCAGGCCAGATCCACATGCTGAAAGAGGCAGTAGAaaaggagaaggaaagaaaaagaaatgtcgCTCAACCTGCTGAACTCACCCACTGTGCTTACACCAGCCTCCAAGCAGACATGCCAGCTTGTTACCACCGTGTGTCCCGTCTGGAGGCAGAGCTGCTGCTTGAGAAAGAGGCCGAGAAGGGAAACCTCCTGCTGAGGCCCGGGAGTAACGGAACCACCTTCGCTGTCAGCACCAGACAGGACCTTGaaggCTCCGTGTTCAGACACTACCGTGTGACTCGTAAACCTGAAGGGGGCTTCGCCATTGACGTGGACGTTCCTGTCCCATGTGCCACGCTACATGATGTGATCAACTATTTAGTGGAAAAAACGGACGGAGTTCTGATTCCTCTGATCATTGAGGAAGCCTATGATAAAAACATCACTTTTATTCGGACTGATAATGACAATGGAGAGATGAGCATTCGGCGTGCCTCGTCAAACCTCATCCCACCAAGTTTACCCTCCAAACCAGtCGCTCTAAGAGTACCGACTCCTAAACCAGCGCCAGCACCAATTGAAGAAAATAATTTGTATCAGAATGAAGAGCTGGAGGAGAAAGACAACGAGACAGAGGATTCCTCAGCTGTTCCAGTAGCACAACCGGAGACAAACAAACTAAAGAAAGCAGTAAGGCCTCCAGCTCCTGTTCCTCGCAAATTGCCCTTTTCTACATCACCCCtgtcctcctccaccaccaccaccacccaggCTGGTTCTACCTCCACAAACAGCCTGCATTTGAGGATGAGAAACCCCACAGACCCTCTGGGACCGACAATATCGGAGCTGAAACTCAAGTTTGGACAAAAGGCCAGGTGTTAAGAGTGTCCTCTGCTGCTGGGAACCTCTCAAAGcctctgggaaaaaaaacaaatcagcaaCAACCAGTGACTCACACCAGTACAGAGAGCCATTTACCAGTCTGTCCCAGCAAGATGTACCAACACATGgtagctttccacacaaacaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810098.1 True 2058 mRNA 0.46 13 28111585 28127231
XM_039810099.1 False 1483 mRNA 0.49 14 28111585 28126747

Neighbor

gene id symbol gene type direction distance location
march2 march2 coding upstream 12780 28090705 ~ 28098805 (+)
LOC120564862 LOC104939946,LOC103370860,LOC101073928,LOC105932471,LOC103155165 coding upstream 21001 28085890 ~ 28090584 (+)
gpx4a gpx4 coding upstream 84347 28021945 ~ 28027238 (+)
arhgap45b arhgap45 coding upstream 93897 28000091 ~ 28017688 (+)
tjp3 tjp3 coding upstream 114171 27972793 ~ 27997414 (+)
si:ch211-129c21.1 LOC103369187 coding downstream 19422 28146653 ~ 28169655 (+)
chaf1a chaf1a coding downstream 52237 28179468 ~ 28192130 (+)
uap1 uap1 coding downstream 78261 28205492 ~ 28218081 (+)
ddr2a ddr2 coding downstream 90971 28218202 ~ 28253130 (+)
hsd17b7 hsd17b7,LOC100698819 coding downstream 126064 28253295 ~ 28257604 (+)
G98770 LOC104966597,LOC101073477 non-coding upstream 229274 27879317 ~ 27882311 (+)
G98766 hapln4 non-coding upstream 252462 27855676 ~ 27859123 (+)
G98763 NA non-coding upstream 262647 27848733 ~ 27848938 (+)
G98723 NA non-coding upstream 524477 27586425 ~ 27587108 (+)
G98685 NA non-coding upstream 612698 27498223 ~ 27498887 (+)
G98972 NA non-coding downstream 185363 28312594 ~ 28318888 (+)
LOC120565132 NA non-coding downstream 322312 28449543 ~ 28460210 (+)
G99007 hook1,LOC102781169,LOC106584290 non-coding downstream 442417 28569648 ~ 28570858 (+)
G99108 NA non-coding downstream 560651 28687882 ~ 28688118 (+)
G99189 NA non-coding downstream 843256 28970487 ~ 28972086 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other upstream 27198 28027964 ~ 28084387 (+)
ncanb ncan,LOC104966594,LOC107554802 other upstream 278730 27659696 ~ 27832855 (+)
si:ch211-212d10.2 LOC103371119,LOC104950605,LOC100693321,LOC101487565,LOC102778050 other upstream 734531 27372809 ~ 27377054 (+)
micos13 LOC104918748,LOC103371279,LOC104964520,LOC106536194 other upstream 1315298 26791729 ~ 26796287 (+)
LOC120565098 NA other upstream 1769292 26339543 ~ 26342293 (+)
LOC120564865 NA other downstream 10038 28137269 ~ 28146325 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other downstream 645131 28772362 ~ 28774553 (+)
ralgps2 ralgps2 other downstream 648144 28775375 ~ 28865487 (+)
G99297 NA other downstream 1536402 29663633 ~ 29665090 (+)
si:ch73-389b16.1 ccdc18 other downstream 2300272 30427503 ~ 30429291 (+)

Expression


Co-expression Network