LOC120564865


Basic Information

Item Value
gene id LOC120564865
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 28137269 ~ 28146325 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810103.1
AACGCATCTTCGGACGGACACCAACCACCAACGCCTTTGGGCCGTAGTGCATAGCGCGCATGCGGCAGAAGAGGATTCTGGGtactgatgtttctgttgcgcGGctCTGTCATATGTGCAGACAAACAGCAGAGACATGACAAGTCGGAGACGAAGAAGACCACCTCTCGCAAGTTAACAATGGAAATGTGGCTGAAACTGTCGACTCTGCTGTTACTCACAGCCCTGGGGATATCTGGTCAAGCACCTGTGATTCTGGATGAAACgcaaaaaaacatggaaattgCTTTTGGTTCCTCTGTGATTTTCCGATGTGGTTTGAAGAACAAGACCCATAGAGTTTGGGTAAAATGGTATTTCAACCCGTTTGGATCTTCATTCAATGAATCACACCAATTCTGTAACAAATCTGTAAAGCCCTCCACCGCTAACCAAACAAATCAGGACCCGAGGGACGAAGAGCAATGTTGCATTAAATCAAATGTAACACACCAGGACAGCGGATGGTACTTTCGCGAAGTCAAAATAGAGATTCCCACACTAACCTCTTATTACAGCATCGGAACAGAAGTAATTATTTCGCAGAGCAAGGAACATACAACGCACCCGTCACTAACCCTAGTGACAGGCAAACAagCTACTGTGCCTCACGCAGACAAACTCTCGCTCATCGACCGCTGGATGTGGATCCTGTTGGGGGTATCTACTTTCATCCTGATTGTCCTGCTGGTCCTATGTGTCTTGCTGAGAAGAAGACTCCGCAGAAGCAGAGGAGAAGATCCTATCTATGCAAACACTCGTCCTGTGGCCAACAAACAACCTTCACCTCGGCCGGCGATGGCCGTGGGCAACCTGAAGACGGCTTCTTCCTCTCAAAACCTCCGGAACCCAAGTCCAGGCAGGAGATACGACGATGGCAAACAGAGATACAAACATTGAAGAAATCATGGACCTCACACCCCCTCCTCACATTTAGCTACGGCCTTTACCTGTAAATGAACggcctttttttattatcataatGTTTCCTGGTGTCATGTGTTTTTGTGGTACAGACTGGTACAGAAGTGGAAATGTATGTAGCCTTCTTTTCGGATATTTGCTGTAAAATAAATAGCTATTATGAGCCACTAGGTGGCAGATCAGGCTATCAATGGATAGGCTACATTCAAAAtggtcttttttcttttcttttgtttgtatttaaaCTCCTAAAAGTATTAGAACATGTTGCCAACAGCAGCCTTTGTATAGTAAATAAGCAAAAAGTGCTATTGTAAATTGCTATTTCTAGTATGACTTTCATATGGGAATGagatgttaatgtttttttttatcaact
>XM_039810104.1
AACGCATCTTCGGACGGACACCAACCACCAACGCCTTTGGGCCGTAGTGCATAGCGCGCATGCGGCAGAAGAGGATTCTGGGtactgatgtttctgttgcgcGGctCTGTCATATGTGCAGACAAACAGCAGAGACATGACAAGTCGGAGACGAAGAAGACCACCTCTCGCAAGTTAACAATGGAAATGTGGCTGAAACTGTCGACTCTGCTGTTACTCACAGCCCTGGGGATATCTGGTCAAGCACCTGTGATTCTGGATGAAACgcaaaaaaacatggaaattgCTTTTGGTTCCTCTGTGATTTTCCGATGTGGTTTGAAGAACAAGACCCATAGAGTTTGGGTAAAATGGTATTTCAACCCGTTTGGATCTTCATTCAATGAATCACACCAATTCTGTAACAAATCTGTAAAGCCCTCCACCGCTAACCAAACAAATCAGGACCCGAGGGACGAAGAGCAATGTTGCATTAAATCAAATGTAACACACCAGGACAGCGGATGGTACTTTCGCGAAGTCAAAATAGAGATTCCCACACTAACCTCTTATTACAGCATCGGAACAGAAGTAATTATTTCTACTGTGCCTCACGCAGACAAACTCTCGCTCATCGACCGCTGGATGTGGATCCTGTTGGGGGTATCTACTTTCATCCTGATTGTCCTGCTGGTCCTATGTGTCTTGCTGAGAAGAAGACTCCGCAGAAGCAGAGGAGAAGATCCTATCTATGCAAACACTCGTCCTGTGGCCAACAAACAACCTTCACCTCGGCCGGCGATGGCCGTGGGCAACCTGAAGACGGCTTCTTCCTCTCAAAACCTCCGGAACCCAAGTCCAGGCAGGAGATACGACGATGGCAAACAGAGATACAAACATTGAAGAAATCATGGACCTCACACCCCCTCCTCACATTTAGCTACGGCCTTTACCTGTAAATGAACggcctttttttattatcataatGTTTCCTGGTGTCATGTGTTTTTGTGGTACAGACTGGTACAGAAGTGGAAATGTATGTAGCCTTCTTTTCGGATATTTGCTGTAAAATAAATAGCTATTATGAGCCACTAGGTGGCAGATCAGGCTATCAATGGATAGGCTACATTCAAAAtggtcttttttcttttcttttgtttgtatttaaaCTCCTAAAAGTATTAGAACATGTTGCCAACAGCAGCCTTTGTATAGTAAATAAGCAAAAAGTGCTATTGTAAATTGCTATTTCTAGTATGACTTTCATATGGGAATGagatgttaatgtttttttttatcaact
>XM_039810105.1
CATCTTCGGACGGACACCAACCACCAACGCCTTTGGGCCGTAGTGCATAGCGCGCATGCGGCAGAAGAGGATTCTGGGtactgatgtttctgttgcgcGGGCAGGACCTACTTTCAGTCTCTGTGAAAAAGAAGTGCATATGGGTTGAGctCTGTCATATGTGCAGACAAACAGCAGAGACATGACAAGTCGGAGACGAAGAAGACCACCTCTCGCAAGTTAACAATGGAAATGTGGCTGAAACTGTCGACTCTGCTGTTACTCACAGCCCTGGGGATATCTGGTCAAGCACCTGTGATTCTGGATGAAACgcaaaaaaacatggaaattgCTTTTGGTTCCTCTGTGATTTTCCGATGTGGTTTGAAGAACAAGACCCATAGAGTTTGGGTAAAATGGTATTTCAACCCGTTTGGATCTTCATTCAATGAATCACACCAATTCTGTAACAAATCTGTAAAGCCCTCCACCGCTAACCAAACAAATCAGGACCCGAGGGACGAAGAGCAATGTTGCATTAAATCAAATGTAACACACCAGGACAGCGGATGGTACTTTCGCGAAGTCAAAATAGAGATTCCCACACTAACCTCTTATTACAGCATCGGAACAGAAGTAATTATTTCGCAGAGCAAGGAACATACAACGCACCCGTCACTAACCCTAGTGACAGGCAAACAagCTACTGTGCCTCACGCAGACAAACTCTCGCTCATCGACCGCTGGATGTGGATCCTGTTGGGGGTATCTACTTTCATCCTGATTGTCCTGCTGGTCCTATGTGTCTTGCTGAGAAGAAGACTCCGCAGAAGCAGAGGAGAAGATCCTATCTATGCAAACACTCGTCCTGTGGCCAACAAACAACCTTCACCTCGGCCGGCGATGGCCGTGGGCAACCTGAAGACGGCTTCTTCCTCTCAAAACCTCCGGAACCCAAGTCCAGGCAGGAGATACGACGATGGCAAACAGAGATACAAACATTGAAGAAATCATGGACCTCACACCCCCTCCTCACATTTAGCTACGGCCTTTACCTGTAAATGAACggcctttttttattatcataatGTTTCCTGGTGTCATGTGTTTTTGTGGTACAGACTGGTACAGAAGTGGAAATGTATGTAGCCTTCTTTTCGGATATTTGCTGTAAAATAAATAGCTATTATGAGCCACTAGGTGGCAGATCAGGCTATCAATGGATAGGCTACATTCAAAAtggtcttttttcttttcttttgtttgtatttaaaCTCCTAAAAGTATTAGAACATGTTGCCAACAGCAGCCTTTGTATAGTAAATAAGCAAAAAGTGCTATTGTAAATTGCTATTTCTAGTATGACTTTCATATGGGAATGagatgttaatgtttttttttatcaact
>XM_039810106.1
AAGTTTGTCAAGGCAAAGTTTGActaaaaaaggaacaaaataacatttccgGCATTATCGTACAATTCACGGTCTGCTGTGCTGTATCTGCATGATTGTTggcaaaatgttttaaaacaaCCAGAATGACTTAAGGCTGTGTTTTCATAGGGAAGAGCAAAAGCAAAGTAGAtctattcctttttttattgaAGAGACCCAGTAGTAGAACAACACCATTATGTTCTATAAATATTGAAAATGTGTACATTTATATGTTTAACCATAACTTTGTAACCAATAGcagcaatataaataaaatcgTGTAAATCAGTTTTTAACATATTGCTActttatttcattatgtttaCATAGAACAAACCACCCAAAAATACCTTTGCTTGAGACACAGCTGTAAACAAATTACAACCAAAAAATGAcaagataaaatacaagaacaCACAAGGAGATTCATCATGAGAAAAGACCCGTCTCTGTAGGCCTGCCTTTTATTCCACCAACAGTATAATACTAGTGTGAATGTTCGGTATTTTCAGTTTAATTGAAAATATAGATGAGGTATATTTCAAACACAGCGTCCACTCAAATCTAAACTACTGTcccattaaaatgatttatgatCATTTCTCTGCTTACATTACAGGCAGGACCTACTTTCAGTCTCTGTGAAAAAGAAGTGCATATGGGTTGAGctCTGTCATATGTGCAGACAAACAGCAGAGACATGACAAGTCGGAGACGAAGAAGACCACCTCTCGCAAGTTAACAATGGAAATGTGGCTGAAACTGTCGACTCTGCTGTTACTCACAGCCCTGGGGATATCTGGTCAAGCACCTGTGATTCTGGATGAAACgcaaaaaaacatggaaattgCTTTTGGTTCCTCTGTGATTTTCCGATGTGGTTTGAAGAACAAGACCCATAGAGTTTGGGTAAAATGGTATTTCAACCCGTTTGGATCTTCATTCAATGAATCACACCAATTCTGTAACAAATCTGTAAAGCCCTCCACCGCTAACCAAACAAATCAGGACCCGAGGGACGAAGAGCAATGTTGCATTAAATCAAATGTAACACACCAGGACAGCGGATGGTACTTTCGCGAAGTCAAAATAGAGATTCCCACACTAACCTCTTATTACAGCATCGGAACAGAAGTAATTATTTCGCAGAGCAAGGAACATACAACGCACCCGTCACTAACCCTAGTGACAGGCAAACAagCTACTGTGCCTCACGCAGACAAACTCTCGCTCATCGACCGCTGGATGTGGATCCTGTTGGGGGTATCTACTTTCATCCTGATTGTCCTGCTGGTCCTATGTGTCTTGCTGAGAAGAAGACTCCGCAGAAGCAGAGGAGAAGATCCTATCTATGCAAACACTCGTCCTGTGGCCAACAAACAACCTTCACCTCGGCCGGCGATGGCCGTGGGCAACCTGAAGACGGCTTCTTCCTCTCAAAACCTCCGGAACCCAAGTCCAGGCAGGAGATACGACGATGGCAAACAGAGATACAAACATTGAAGAAATCATGGACCTCACACCCCCTCCTCACATTTAGCTACGGCCTTTACCTGTAAATGAACggcctttttttattatcataatGTTTCCTGGTGTCATGTGTTTTTGTGGTACAGACTGGTACAGAAGTGGAAATGTATGTAGCCTTCTTTTCGGATATTTGCTGTAAAATAAATAGCTATTATGAGCCACTAGGTGGCAGATCAGGCTATCAATGGATAGGCTACATTCAAAAtggtcttttttcttttcttttgtttgtatttaaaCTCCTAAAAGTATTAGAACATGTTGCCAACAGCAGCCTTTGTATAGTAAATAAGCAAAAAGTGCTATTGTAAATTGCTATTTCTAGTATGACTTTCATATGGGAATGagatgttaatgtttttttttatcaact
>XM_039810107.1
AACGCATCTTCGGACGGACACCAACCACCAACGCCTTTGGGCCGTAGTGCATAGCGCGCATGCGGCAGAAGAGGATTCTGGGtactgatgtttctgttgcgcGGctCTGTCATATGTGCAGACAAACAGCAGAGACATGACAAGTCGGAGACGAAGAAGACCACCTCTCGCAAGTTAACAATGGAAATGTGGCTGAAACTGTCGACTCTGCTGTTACTCACAGCCCTGGGGATATCTGGTCAAGCACCTGTGATTCTGGATGAAACgcaaaaaaacatggaaattgCTTTTGGTTCCTCTGTGATTTTCCGATGTGGTTTGAAGAACAAGACCCATAGAGTTTGGGTAAAATGCGCAGAGCAAGGAACATACAACGCACCCGTCACTAACCCTAGTGACAGGCAAACAagCTACTGTGCCTCACGCAGACAAACTCTCGCTCATCGACCGCTGGATGTGGATCCTGTTGGGGGTATCTACTTTCATCCTGATTGTCCTGCTGGTCCTATGTGTCTTGCTGAGAAGAAGACTCCGCAGAAGCAGAGGAGAAGATCCTATCTATGCAAACACTCGTCCTGTGGCCAACAAACAACCTTCACCTCGGCCGGCGATGGCCGTGGGCAACCTGAAGACGGCTTCTTCCTCTCAAAACCTCCGGAACCCAAGTCCAGGCAGGAGATACGACGATGGCAAACAGAGATACAAACATTGAAGAAATCATGGACCTCACACCCCCTCCTCACATTTAGCTACGGCCTTTACCTGTAAATGAACggcctttttttattatcataatGTTTCCTGGTGTCATGTGTTTTTGTGGTACAGACTGGTACAGAAGTGGAAATGTATGTAGCCTTCTTTTCGGATATTTGCTGTAAAATAAATAGCTATTATGAGCCACTAGGTGGCAGATCAGGCTATCAATGGATAGGCTACATTCAAAAtggtcttttttcttttcttttgtttgtatttaaaCTCCTAAAAGTATTAGAACATGTTGCCAACAGCAGCCTTTGTATAGTAAATAAGCAAAAAGTGCTATTGTAAATTGCTATTTCTAGTATGACTTTCATATGGGAATGagatgttaatgtttttttttatcaact
>XM_039810108.1
AACGCATCTTCGGACGGACACCAACCACCAACGCCTTTGGGCCGTAGTGCATAGCGCGCATGCGGCAGAAGAGGATTCTGGGtactgatgtttctgttgcgcGGctCTGTCATATGTGCAGACAAACAGCAGAGACATGACAAGTCGGAGACGAAGAAGACCACCTCTCGCAAGTTAACAATGGAAATGTGGCTGAAACTGTCGACTCTGCTGTTACTCACAGCCCTGGGGATATCTGGTCAAGCACCTGTGATTCTGGATGAAACgcaaaaaaacatggaaattgCTTTTGGTTCCTCTGTGATTTTCCGATGTGGTTTGAAGAACAAGACCCATAGAGTTTGGGTAAAATGCGCAGAGCAAGGAACATACAACGCACCCGTCACTAACCCTAGTGACAGGCAAACAagCTACTGTGCCTCACGCAGACAAACTCTCGCTCATCGACCGCTGGATGTGGATCCTGTTGGGGGTATCTACTTTCATCCTGATTGTCCTGCTGGTCCTATGTGTCTTGCTGAGAAGAAGACTCCGCAGAAGCAGAGTCTGAGTGAGAGAACAAAAGAAGCATGTATATAAGCCCAACTCGTGGCCGGTGGATGCAAACTGAGAGAAGATCCTATCTATGCAAACACTCGTCCTGTGGCCAACAAACAACCTTCACCTCGGCCGGCGATGGCCGTGGGCAACCTGAAGACGGCTTCTTCCTCTCAAAACCTCCGGAACCCAAGTCCAGGCAGGAGATACGACGATGGCAAACAGAGATACAAACATTGAAGAAATCATGGACCTCACACCCCCTCCTCACATTTAGCTACGGCCTTTACCTGTAAATGAACggcctttttttattatcataatGTTTCCTGGTGTCATGTGTTTTTGTGGTACAGACTGGTACAGAAGTGGAAATGTATGTAGCCTTCTTTTCGGATATTTGCTGTAAAATAAATAGCTATTATGAGCCACTAGGTGGCAGATCAGGCTATCAATGGATAGGCTACATTCAAAAtggtcttttttcttttcttttgtttgtatttaaaCTCCTAAAAGTATTAGAACATGTTGCCAACAGCAGCCTTTGTATAGTAAATAAGCAAAAAGTGCTATTGTAAATTGCTATTTCTAGTATGACTTTCATATGGGAATGagatgttaatgtttttttttatcaact
>XR_005640167.1
AACGCATCTTCGGACGGACACCAACCACCAACGCCTTTGGGCCGTAGTGCATAGCGCGCATGCGGCAGAAGAGGATTCTGGGtactgatgtttctgttgcgcGGctCTGTCATATGTGCAGACAAACAGCAGAGACATGACAAGTCGGAGACGAAGAAGACCACCTCTCGCAAGTTAACAATGGAAATGTGGCTGAAACTGTCGACTCTGCTGTTACTCACAGCCCTGGGGATATCTGGTCAAGCACCTGTGATTCTGGATGAAACgcaaaaaaacatggaaattgCTTTTGGTTCCTCTGTGATTTTCCGATGTGGTTTGAAGAACAAGACCCATAGAGTTTGGGTAAAATGGTATTTCAACCCGTTTGGATCTTCATTCAATGAATCACACCAATTCTGTAACAAATCTGTAAAGCCCTCCACCGCTAACCAAACAAATCAGGACCCGAGGGACGAAGAGCAATGTTGCATTAAATCAAATGTAACACACCAGGACAGCGGATGGTACTTTCGCGAAGTCAAAATAGAGATTCCCACACTAACCTCTTATTACAGCATCGGAACAGAAGTAATTATTTCGCAGAGCAAGGAACATACAACGCACCCGTCACTAACCCTAGTGACAGGCAAACAagCTACTGTGCCTCACGCAGACAAACTCTCGCTCATCGACCGCTGGATGTGGATCCTGTTGGGGGTATCTACTTTCATCCTGATTGTCCTGCTGGTCCTATGTGTCTTGCTGAGAAGAAGACTCCGCAGAAGCAGAGTCTGAGTGAGAGAACAAAAGAAGCATGTATATAAGCCCAACTCGTGGCCGGTGGATGCAAACTGAGAGAAGATCCTATCTATGCAAACACTCGTCCTGTGGCCAACAAACAACCTTCACCTCGGCCGGCGATGGCCGTGGGCAACCTGAAGACGGCTTCTTCCTCTCAAAACCTCCGGAACCCAAGTCCAGGCAGGAGATACGACGATGGCAAACAGAGATACAAACATTGAAGAAATCATGGACCTCACACCCCCTCCTCACATTTAGCTACGGCCTTTACCTGTAAATGAACggcctttttttattatcataatGTTTCCTGGTGTCATGTGTTTTTGTGGTACAGACTGGTACAGAAGTGGAAATGTATGTAGCCTTCTTTTCGGATATTTGCTGTAAAATAAATAGCTATTATGAGCCACTAGGTGGCAGATCAGGCTATCAATGGATAGGCTACATTCAAAAtggtcttttttcttttcttttgtttgtatttaaaCTCCTAAAAGTATTAGAACATGTTGCCAACAGCAGCCTTTGTATAGTAAATAAGCAAAAAGTGCTATTGTAAATTGCTATTTCTAGTATGACTTTCATATGGGAATGagatgttaatgtttttttttatcaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810103.1 False 1342 mRNA 0.44 6 28137269 28146325
XM_039810104.1 False 1285 mRNA 0.44 5 28137269 28146325
XM_039810105.1 False 1387 mRNA 0.44 7 28137273 28146325
XM_039810106.1 True 1930 mRNA 0.40 6 28138381 28146325
XM_039810107.1 False 1115 mRNA 0.45 6 28137269 28146325
XM_039810108.1 False 1180 mRNA 0.45 7 28137269 28146325
XR_005640167.1 False 1407 transcript 0.44 7 28137269 28146325

Neighbor

gene id symbol gene type direction distance location
LOC120564863 NA coding upstream 10038 28111585 ~ 28127231 (+)
march2 march2 coding upstream 38464 28090705 ~ 28098805 (+)
LOC120564862 LOC104939946,LOC103370860,LOC101073928,LOC105932471,LOC103155165 coding upstream 46685 28085890 ~ 28090584 (+)
gpx4a gpx4 coding upstream 110031 28021945 ~ 28027238 (+)
arhgap45b arhgap45 coding upstream 119581 28000091 ~ 28017688 (+)
si:ch211-129c21.1 LOC103369187 coding downstream 328 28146653 ~ 28169655 (+)
chaf1a chaf1a coding downstream 33143 28179468 ~ 28192130 (+)
uap1 uap1 coding downstream 59167 28205492 ~ 28218081 (+)
ddr2a ddr2 coding downstream 71877 28218202 ~ 28253130 (+)
hsd17b7 hsd17b7,LOC100698819 coding downstream 106970 28253295 ~ 28257604 (+)
G98770 LOC104966597,LOC101073477 non-coding upstream 254958 27879317 ~ 27882311 (+)
G98766 hapln4 non-coding upstream 278146 27855676 ~ 27859123 (+)
G98763 NA non-coding upstream 288331 27848733 ~ 27848938 (+)
G98723 NA non-coding upstream 550161 27586425 ~ 27587108 (+)
G98685 NA non-coding upstream 638382 27498223 ~ 27498887 (+)
G98972 NA non-coding downstream 166269 28312594 ~ 28318888 (+)
LOC120565132 NA non-coding downstream 303218 28449543 ~ 28460210 (+)
G99007 hook1,LOC102781169,LOC106584290 non-coding downstream 423323 28569648 ~ 28570858 (+)
G99108 NA non-coding downstream 541557 28687882 ~ 28688118 (+)
G99189 NA non-coding downstream 824162 28970487 ~ 28972086 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other upstream 52882 28027964 ~ 28084387 (+)
ncanb ncan,LOC104966594,LOC107554802 other upstream 304414 27659696 ~ 27832855 (+)
si:ch211-212d10.2 LOC103371119,LOC104950605,LOC100693321,LOC101487565,LOC102778050 other upstream 760215 27372809 ~ 27377054 (+)
micos13 LOC104918748,LOC103371279,LOC104964520,LOC106536194 other upstream 1340982 26791729 ~ 26796287 (+)
LOC120565098 NA other upstream 1794976 26339543 ~ 26342293 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other downstream 626037 28772362 ~ 28774553 (+)
ralgps2 ralgps2 other downstream 629050 28775375 ~ 28865487 (+)
G99297 NA other downstream 1517308 29663633 ~ 29665090 (+)
si:ch73-389b16.1 ccdc18 other downstream 2281178 30427503 ~ 30429291 (+)
G99545 NA other downstream 2664193 30810518 ~ 30811236 (+)

Expression


Co-expression Network