LOC120564870 (bivm)


Basic Information

Item Value
gene id LOC120564870
gene name bivm
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 40643959 ~ 40650830 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810116.1
TAAACAGCCTACGTTTTAGGAAAGCCAAGAAGCTGTTGTGGCATCCTATTTAGGTCTATCTTAATTTTTTGAAATGTTCCCATGCTATCTCTGATTGTCTTGCAGTAGTGGTAAATCCCAGAGCATTCCCAAAAACACATGGTAGTGATTTGCAGCTTCTCCAGCATCCTGTCTGCCTCAGCCTGGACTGTTAGGAAGCATCTGACCAATACTTTCCACTTGAACTCTCTCCATGACAAAAAGACATCCCAGTCAGCCTCCGCTAATTCTGCCAGCGGTCATAGAAGTGGCTGTCCGATGCCTAATACGTCAGAAGGTCAAGGAGCAAACCTATCTGGGCCAGCAGAACCGTCGGGGCTGCAAAGGCCCTCTGATGGGGAGGAGGAACGCGGTCTGATCAGCTCCCTTGCCCGGGACGCTGCGAGAGTCAGGAGGGCTTCGAGTGCAGAACTCCACCTGCCGTGGACCTGCCCGGTCACACACTCCCGTGAGAAGTTCTACACCGTCTGCTCCGATTATGCTCTTCTCAACCAGGCTGCCTCTGTGTACTGTCCCCCAAATGCAGCCAGGGACATTGTCCCGAAAAAGCAGGATGAGGGGCTGTCCCCTGTGAAGCCCAAACACGCCGCTGACTTCAGCGCTGGCCAGTCTGGAGGGGCCCATGTGGGATCAGATGGGGACTGTGACATGGTGGAAGGGTCCTCTGGCCACACTAAACCTGTCTTGGCCTGGGAGATTGATACCACAGACTTCAACGCTGTGCTCACAAGAAAAATAAGAACAAGCAATGTGAAGAAGTGCAGCACCAAGAAGATGAAGTCATCAGACAGACCCAGCCGGAATCTGCAGGACGTCCCACCTCACGCCTCGCTGGACGAGATCAAAGAGAGAAAAGTGCTCGACCTCAGAAGATGGTACTGCATCAGTCGGCCACAGTACAAGACTTCATGTGGAATCTCTTCCCTGGTGTCCTGCTGGAACTTCTTGTACAGCACTCTGGGTGCAGGGAGTCTACCACCCATCTCTCAGGAGGAGGCTCTGCATATTCTGGGTTTTCAGCCGCCTTTTGAAGAAATCAAGTTTGGCCCTTTCACTGGCAATGCTACACTCATGCGGTGGTTCAGACAAATCAATGACAATTTCCGGGTGCGAGGTTGCTCCTACATTCTGTACAAACCACATGGAAAAAACAAGACCGCAGGAGAGACCGCTGAAGGAGCGTTGATGAAACTGACGCAAGGGCTGAACGACGAGTCTATGGCCTACATCTACCACTGCCAGAACCACTACTTCTGCCCGGTGGGCTTTGAAGCTACGCCACTCAAAGCAGCAAAGGCTTACAGgGGCCCTCTCCCCACAAACGAAATGGAGCACTGGATCCTTATTGGCGAGCCCAGCAGGAAACACCCAGCTATTCACTGTAAAAAATGGCAGGACATTGTGACGGACCTCAACACACAAAATCCAGAATACCTGGACATTCGTCACACAGAGAGGGGGATCCAGCGCCGCAAAACCAAAAAGGTGGGTGGCAACCTGCACTGCATCATGGCCTTCCAGAGGGTGAACTGGCAGAAGCTCGGCCCCTGGGCTCTGAACCTGGAGAACCTACGCCACGACTTCCACCACCACGGCACAGAGCGGGCGCACGGAAGCGTCGCTGAGGAAGCCGAGGAGAGAGCAGCATCCAAGCGCCTGGCCTACCTGGGGCGCTCGCACAGTATGGGCAGTCAGAAAGACAGCAGCTGGAAACGCCTGTCCAACACTACAGAGTACAGACAGAGGAGCTCCCCTGACAGCGACCTCGAAGAAGACATCACAGACTGAAAAGGTTTATTGGGACACATG
>XM_039810117.1
GTTTACTTGAgtgttgtatttgtattatcTAGCTTTGATAAAAAATGTTGGCACCGCGGTTGCTATTCAGAATGGTACAGTCCTTTAAACCTGCACAGGAAGAGGATACGGAAAAGACATCCCAGTCAGCCTCCGCTAATTCTGCCAGCGGTCATAGAAGTGGCTGTCCGATGCCTAATACGTCAGAAGGTCAAGGAGCAAACCTATCTGGGCCAGCAGAACCGTCGGGGCTGCAAAGGCCCTCTGATGGGGAGGAGGAACGCGGTCTGATCAGCTCCCTTGCCCGGGACGCTGCGAGAGTCAGGAGGGCTTCGAGTGCAGAACTCCACCTGCCGTGGACCTGCCCGGTCACACACTCCCGTGAGAAGTTCTACACCGTCTGCTCCGATTATGCTCTTCTCAACCAGGCTGCCTCTGTGTACTGTCCCCCAAATGCAGCCAGGGACATTGTCCCGAAAAAGCAGGATGAGGGGCTGTCCCCTGTGAAGCCCAAACACGCCGCTGACTTCAGCGCTGGCCAGTCTGGAGGGGCCCATGTGGGATCAGATGGGGACTGTGACATGGTGGAAGGGTCCTCTGGCCACACTAAACCTGTCTTGGCCTGGGAGATTGATACCACAGACTTCAACGCTGTGCTCACAAGAAAAATAAGAACAAGCAATGTGAAGAAGTGCAGCACCAAGAAGATGAAGTCATCAGACAGACCCAGCCGGAATCTGCAGGACGTCCCACCTCACGCCTCGCTGGACGAGATCAAAGAGAGAAAAGTGCTCGACCTCAGAAGATGGTACTGCATCAGTCGGCCACAGTACAAGACTTCATGTGGAATCTCTTCCCTGGTGTCCTGCTGGAACTTCTTGTACAGCACTCTGGGTGCAGGGAGTCTACCACCCATCTCTCAGGAGGAGGCTCTGCATATTCTGGGTTTTCAGCCGCCTTTTGAAGAAATCAAGTTTGGCCCTTTCACTGGCAATGCTACACTCATGCGGTGGTTCAGACAAATCAATGACAATTTCCGGGTGCGAGGTTGCTCCTACATTCTGTACAAACCACATGGAAAAAACAAGACCGCAGGAGAGACCGCTGAAGGAGCGTTGATGAAACTGACGCAAGGGCTGAACGACGAGTCTATGGCCTACATCTACCACTGCCAGAACCACTACTTCTGCCCGGTGGGCTTTGAAGCTACGCCACTCAAAGCAGCAAAGGCTTACAGgGGCCCTCTCCCCACAAACGAAATGGAGCACTGGATCCTTATTGGCGAGCCCAGCAGGAAACACCCAGCTATTCACTGTAAAAAATGGCAGGACATTGTGACGGACCTCAACACACAAAATCCAGAATACCTGGACATTCGTCACACAGAGAGGGGGATCCAGCGCCGCAAAACCAAAAAGGTGGGTGGCAACCTGCACTGCATCATGGCCTTCCAGAGGGTGAACTGGCAGAAGCTCGGCCCCTGGGCTCTGAACCTGGAGAACCTACGCCACGACTTCCACCACCACGGCACAGAGCGGGCGCACGGAAGCGTCGCTGAGGAAGCCGAGGAGAGAGCAGCATCCAAGCGCCTGGCCTACCTGGGGCGCTCGCACAGTATGGGCAGTCAGAAAGACAGCAGCTGGAAACGCCTGTCCAACACTACAGAGTACAGACAGAGGAGCTCCCCTGACAGCGACCTCGAAGAAGACATCACAGACTGAAAAGGTTTATTGGGACACATG
>XM_039810119.1
ATTatcgttattttttttttaaatgtagcaaGCTAATGGGCACCTACGTTTAGTGATATGTGGTTAACTCGACGCTTTGCTAATTCCCAAGCCCGCTCGGTACTAAGCCTATGCACGTAGTATGGTGGAAGAAACAACGTACCAACTGGAAAAGACATCCCAGTCAGCCTCCGCTAATTCTGCCAGCGGTCATAGAAGTGGCTGTCCGATGCCTAATACGTCAGAAGGTCAAGGAGCAAACCTATCTGGGCCAGCAGAACCGTCGGGGCTGCAAAGGCCCTCTGATGGGGAGGAGGAACGCGGTCTGATCAGCTCCCTTGCCCGGGACGCTGCGAGAGTCAGGAGGGCTTCGAGTGCAGAACTCCACCTGCCGTGGACCTGCCCGGTCACACACTCCCGTGAGAAGTTCTACACCGTCTGCTCCGATTATGCTCTTCTCAACCAGGCTGCCTCTGTGTACTGTCCCCCAAATGCAGCCAGGGACATTGTCCCGAAAAAGCAGGATGAGGGGCTGTCCCCTGTGAAGCCCAAACACGCCGCTGACTTCAGCGCTGGCCAGTCTGGAGGGGCCCATGTGGGATCAGATGGGGACTGTGACATGGTGGAAGGGTCCTCTGGCCACACTAAACCTGTCTTGGCCTGGGAGATTGATACCACAGACTTCAACGCTGTGCTCACAAGAAAAATAAGAACAAGCAATGTGAAGAAGTGCAGCACCAAGAAGATGAAGTCATCAGACAGACCCAGCCGGAATCTGCAGGACGTCCCACCTCACGCCTCGCTGGACGAGATCAAAGAGAGAAAAGTGCTCGACCTCAGAAGATGGTACTGCATCAGTCGGCCACAGTACAAGACTTCATGTGGAATCTCTTCCCTGGTGTCCTGCTGGAACTTCTTGTACAGCACTCTGGGTGCAGGGAGTCTACCACCCATCTCTCAGGAGGAGGCTCTGCATATTCTGGGTTTTCAGCCGCCTTTTGAAGAAATCAAGTTTGGCCCTTTCACTGGCAATGCTACACTCATGCGGTGGTTCAGACAAATCAATGACAATTTCCGGGTGCGAGGTTGCTCCTACATTCTGTACAAACCACATGGAAAAAACAAGACCGCAGGAGAGACCGCTGAAGGAGCGTTGATGAAACTGACGCAAGGGCTGAACGACGAGTCTATGGCCTACATCTACCACTGCCAGAACCACTACTTCTGCCCGGTGGGCTTTGAAGCTACGCCACTCAAAGCAGCAAAGGCTTACAGgGGCCCTCTCCCCACAAACGAAATGGAGCACTGGATCCTTATTGGCGAGCCCAGCAGGAAACACCCAGCTATTCACTGTAAAAAATGGCAGGACATTGTGACGGACCTCAACACACAAAATCCAGAATACCTGGACATTCGTCACACAGAGAGGGGGATCCAGCGCCGCAAAACCAAAAAGGTGGGTGGCAACCTGCACTGCATCATGGCCTTCCAGAGGGTGAACTGGCAGAAGCTCGGCCCCTGGGCTCTGAACCTGGAGAACCTACGCCACGACTTCCACCACCACGGCACAGAGCGGGCGCACGGAAGCGTCGCTGAGGAAGCCGAGGAGAGAGCAGCATCCAAGCGCCTGGCCTACCTGGGGCGCTCGCACAGTATGGGCAGTCAGAAAGACAGCAGCTGGAAACGCCTGTCCAACACTACAGAGTACAGACAGAGGAGCTCCCCTGACAGCGACCTCGAAGAAGACATCACAGACTGAAAAGGTTTATTGGGACACATG
>XM_039810120.1
TatcgttattttttttttaaatgtagcaaGCTAATGGGCACCTACGTTTAGTGATATGTGGTTAACTCGACGCTTTGCTAATTCCCAAGCCCGCTCGGTACTAAGCCTATGCACGTAGTATGGTGGAAGAAACAACGTACCAACTGGGTGTGTTTACATCTGTTAACTACAATAGAGCACTGCTAGCTGCTAGACTCCAGCGGCGTCACACGTCCAACAACCCCGCAGCTGATAAGAGACACTGCCGGCTGTTTTCATAATAGAAAAGACATCCCAGTCAGCCTCCGCTAATTCTGCCAGCGGTCATAGAAGTGGCTGTCCGATGCCTAATACGTCAGAAGGTCAAGGAGCAAACCTATCTGGGCCAGCAGAACCGTCGGGGCTGCAAAGGCCCTCTGATGGGGAGGAGGAACGCGGTCTGATCAGCTCCCTTGCCCGGGACGCTGCGAGAGTCAGGAGGGCTTCGAGTGCAGAACTCCACCTGCCGTGGACCTGCCCGGTCACACACTCCCGTGAGAAGTTCTACACCGTCTGCTCCGATTATGCTCTTCTCAACCAGGCTGCCTCTGTGTACTGTCCCCCAAATGCAGCCAGGGACATTGTCCCGAAAAAGCAGGATGAGGGGCTGTCCCCTGTGAAGCCCAAACACGCCGCTGACTTCAGCGCTGGCCAGTCTGGAGGGGCCCATGTGGGATCAGATGGGGACTGTGACATGGTGGAAGGGTCCTCTGGCCACACTAAACCTGTCTTGGCCTGGGAGATTGATACCACAGACTTCAACGCTGTGCTCACAAGAAAAATAAGAACAAGCAATGTGAAGAAGTGCAGCACCAAGAAGATGAAGTCATCAGACAGACCCAGCCGGAATCTGCAGGACGTCCCACCTCACGCCTCGCTGGACGAGATCAAAGAGAGAAAAGTGCTCGACCTCAGAAGATGGTACTGCATCAGTCGGCCACAGTACAAGACTTCATGTGGAATCTCTTCCCTGGTGTCCTGCTGGAACTTCTTGTACAGCACTCTGGGTGCAGGGAGTCTACCACCCATCTCTCAGGAGGAGGCTCTGCATATTCTGGGTTTTCAGCCGCCTTTTGAAGAAATCAAGTTTGGCCCTTTCACTGGCAATGCTACACTCATGCGGTGGTTCAGACAAATCAATGACAATTTCCGGGTGCGAGGTTGCTCCTACATTCTGTACAAACCACATGGAAAAAACAAGACCGCAGGAGAGACCGCTGAAGGAGCGTTGATGAAACTGACGCAAGGGCTGAACGACGAGTCTATGGCCTACATCTACCACTGCCAGAACCACTACTTCTGCCCGGTGGGCTTTGAAGCTACGCCACTCAAAGCAGCAAAGGCTTACAGgGGCCCTCTCCCCACAAACGAAATGGAGCACTGGATCCTTATTGGCGAGCCCAGCAGGAAACACCCAGCTATTCACTGTAAAAAATGGCAGGACATTGTGACGGACCTCAACACACAAAATCCAGAATACCTGGACATTCGTCACACAGAGAGGGGGATCCAGCGCCGCAAAACCAAAAAGGTGGGTGGCAACCTGCACTGCATCATGGCCTTCCAGAGGGTGAACTGGCAGAAGCTCGGCCCCTGGGCTCTGAACCTGGAGAACCTACGCCACGACTTCCACCACCACGGCACAGAGCGGGCGCACGGAAGCGTCGCTGAGGAAGCCGAGGAGAGAGCAGCATCCAAGCGCCTGGCCTACCTGGGGCGCTCGCACAGTATGGGCAGTCAGAAAGACAGCAGCTGGAAACGCCTGTCCAACACTACAGAGTACAGACAGAGGAGCTCCCCTGACAGCGACCTCGAAGAAGACATCACAGACTGAAAAGGTTTATTGGGACACATG
>XM_039810121.1
TatcgttattttttttttaaatgtagcaaGCTAATGGGCACCTACGTTTAGTGATATGTGGTTAACTCGACGCTTTGCTAATTCCCAAGCCCGCTCGGTACTAAGCCTATGCACGTAGTATGGTGGAAGAAACAACGTACCAACTGGGTGTGTTTACATCTGTTAACTACAATAGAGCACTGCTAGCTGCTAGACTCCAGCGGCGTCACACGTCCAACAACCCCGCAGCTGATAAGAGACACTGCCGGCTGTTTTCATAATAGGTGACTTATTATAGGTTAAAGAAAAGACATCCCAGTCAGCCTCCGCTAATTCTGCCAGCGGTCATAGAAGTGGCTGTCCGATGCCTAATACGTCAGAAGGTCAAGGAGCAAACCTATCTGGGCCAGCAGAACCGTCGGGGCTGCAAAGGCCCTCTGATGGGGAGGAGGAACGCGGTCTGATCAGCTCCCTTGCCCGGGACGCTGCGAGAGTCAGGAGGGCTTCGAGTGCAGAACTCCACCTGCCGTGGACCTGCCCGGTCACACACTCCCGTGAGAAGTTCTACACCGTCTGCTCCGATTATGCTCTTCTCAACCAGGCTGCCTCTGTGTACTGTCCCCCAAATGCAGCCAGGGACATTGTCCCGAAAAAGCAGGATGAGGGGCTGTCCCCTGTGAAGCCCAAACACGCCGCTGACTTCAGCGCTGGCCAGTCTGGAGGGGCCCATGTGGGATCAGATGGGGACTGTGACATGGTGGAAGGGTCCTCTGGCCACACTAAACCTGTCTTGGCCTGGGAGATTGATACCACAGACTTCAACGCTGTGCTCACAAGAAAAATAAGAACAAGCAATGTGAAGAAGTGCAGCACCAAGAAGATGAAGTCATCAGACAGACCCAGCCGGAATCTGCAGGACGTCCCACCTCACGCCTCGCTGGACGAGATCAAAGAGAGAAAAGTGCTCGACCTCAGAAGATGGTACTGCATCAGTCGGCCACAGTACAAGACTTCATGTGGAATCTCTTCCCTGGTGTCCTGCTGGAACTTCTTGTACAGCACTCTGGGTGCAGGGAGTCTACCACCCATCTCTCAGGAGGAGGCTCTGCATATTCTGGGTTTTCAGCCGCCTTTTGAAGAAATCAAGTTTGGCCCTTTCACTGGCAATGCTACACTCATGCGGTGGTTCAGACAAATCAATGACAATTTCCGGGTGCGAGGTTGCTCCTACATTCTGTACAAACCACATGGAAAAAACAAGACCGCAGGAGAGACCGCTGAAGGAGCGTTGATGAAACTGACGCAAGGGCTGAACGACGAGTCTATGGCCTACATCTACCACTGCCAGAACCACTACTTCTGCCCGGTGGGCTTTGAAGCTACGCCACTCAAAGCAGCAAAGGCTTACAGgGGCCCTCTCCCCACAAACGAAATGGAGCACTGGATCCTTATTGGCGAGCCCAGCAGGAAACACCCAGCTATTCACTGTAAAAAATGGCAGGACATTGTGACGGACCTCAACACACAAAATCCAGAATACCTGGACATTCGTCACACAGAGAGGGGGATCCAGCGCCGCAAAACCAAAAAGGTGGGTGGCAACCTGCACTGCATCATGGCCTTCCAGAGGGTGAACTGGCAGAAGCTCGGCCCCTGGGCTCTGAACCTGGAGAACCTACGCCACGACTTCCACCACCACGGCACAGAGCGGGCGCACGGAAGCGTCGCTGAGGAAGCCGAGGAGAGAGCAGCATCCAAGCGCCTGGCCTACCTGGGGCGCTCGCACAGTATGGGCAGTCAGAAAGACAGCAGCTGGAAACGCCTGTCCAACACTACAGAGTACAGACAGAGGAGCTCCCCTGACAGCGACCTCGAAGAAGACATCACAGACTGAAAAGGTTTATTGGGACACATG

Function

symbol description
bivm Orthologous to human BIVM (basic, immunoglobulin-like variable motif containing).

NR:

description
PREDICTED: basic immunoglobulin-like variable motif-containing protein

GO: NA

KEGG:

id description
K10846 ERCC5, XPG, RAD2; DNA excision repair protein ERCC-5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810116.1 False 1848 mRNA 0.53 10 40643959 40650830
XM_039810117.1 False 1721 mRNA 0.54 10 40644535 40650830
XM_039810119.1 False 1759 mRNA 0.54 10 40644671 40650830
XM_039810120.1 False 1873 mRNA 0.54 10 40644673 40650830
XM_039810121.1 True 1894 mRNA 0.53 10 40644673 40650830

Neighbor

gene id symbol gene type direction distance location
tmem131 NA coding upstream 6275 40603534 ~ 40637684 (+)
ube3a ube3a,LOC103365788 coding upstream 61895 40567947 ~ 40582064 (+)
gabrb3 gabrb3,LOC106914751,LOC103365202 coding upstream 157350 40417993 ~ 40486609 (+)
oca2 oca2 coding upstream 383708 40206026 ~ 40260251 (+)
herc2 LOC103356925 coding upstream 446721 40139433 ~ 40197238 (+)
nme7 nme7 coding downstream 7016 40657846 ~ 40683242 (+)
dpt dpt coding downstream 65103 40715933 ~ 40722835 (+)
zbtb11 zbtb11 coding downstream 86904 40737734 ~ 40747377 (+)
bcl6aa bcl6 coding downstream 435543 41086373 ~ 41105748 (+)
trnap-cgg_3 NA coding downstream 574261 41225091 ~ 41225162 (+)
G101832 NA non-coding upstream 134592 40508891 ~ 40509367 (+)
G101831 NA non-coding upstream 136200 40507500 ~ 40507759 (+)
G101823 NA non-coding upstream 156938 40486791 ~ 40487021 (+)
G101796 NA non-coding upstream 383350 40260363 ~ 40260609 (+)
G101688 NA non-coding upstream 508459 40135207 ~ 40135500 (+)
G101990 NA non-coding downstream 209207 40860037 ~ 40940317 (+)
G102006 NA non-coding downstream 460743 41111573 ~ 41114235 (+)
G102021 NA non-coding downstream 504092 41154922 ~ 41156467 (+)
G102022 LOC106527457,LOC108240210,LOC103354232,LOC107088662 non-coding downstream 505722 41156552 ~ 41157040 (+)
G102074 NA non-coding downstream 558830 41209660 ~ 41268656 (+)
atp10a atp10a other upstream 84064 40515093 ~ 40559895 (+)
LOC120565298 cdkl5,LOC103356958 other upstream 903682 39693912 ~ 39740277 (+)
reps2 reps2,LOC102792668 other upstream 1051197 39561061 ~ 39592762 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other upstream 1179509 39454120 ~ 39464450 (+)
prdm5 prdm5 other upstream 1282226 39323584 ~ 39361733 (+)
G102165 NA other downstream 801844 41452674 ~ 41453306 (+)

Expression


Co-expression Network