LOC120564878


Basic Information

Item Value
gene id LOC120564878
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 9057341 ~ 9062036 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810130.1
AGAGCTCGCTGTGTTAGCTCACACCAATGTGAAGTCCCTCAACcccacactcatacacacacaaaaccactcACAATCCAGTCAATTAGTAGTCCTGTTATTGAGTAATTCAGGGAATTAAATGGCCTCGCTGAAAAATCAAGTTACCTCTTTAATTTGATGCAACAATCTGTATTCTGACCTACTATAAGCTGAGATGTTGAAGAAATAGCTACCTCAGCAGACATGTctcactgtactgtatatctgtaaTTAACAGCATGTTTTCAGGCCCCTGGACACCTCTGGACACCTTCATTCAGTTTTTCAGTTTTCCTCTTCATTTTGTATCTCTACGCAAATCCTATCCCACTGGAATTTTACAGCTGTGAGTCAGTGACCACAGTAACTGAGTCTAAGCAACAGCCAGGCATTTAGATACCTGTACCAGCAGGCCCTCAGCGTCAAAGGCGTTCCACCTTCCCTGCCAGGTTAAAGGCGTGTGCAGGAGGAAAGTTACTGTTCACAGAAACCACAACCACGACTATATTGTACCTCCTTACAGGACATTTCCAGGGATGTAACATGCCAAaacttttgttttcaaagaTCCGGTTTAATGAAATTAAGGATCTGATTCAAAATGTGAAGCGGCCCAGAAGAATTGATATTGTTCTTAATGGAAGGAGGCAGAAGAAGGACATCCAGCCTCGCACAGTAGAAAACATAAATGATGAGACATATCCTTCAAAAGTCAGTTGGCAGACTGATGATAAACTCCACCCGACTATGGAAACATTGCTACACGATAAAAAATATTTAGCAGCATTCCGCAGCTTCTTGCAGTCTGAGTTCAGTGAAGAAAACATCGATTTTTGGCTCGCATGTGAAGACTTTAGATGGACCACCTCACAGGAGGATCTCCGCTGGAAAGCAGAGGGGCTCTACCAGGAGTTCATCCAGCCTTCAGCCTGCAGAGAGATCAACGTTGACCACCACATTAGAGAGAGGATCAAGAAGTCTTTGGAGAAGCCGAGCCACTCCTGCTTCGATGAGGCCCAGAAACATGTTTATCTGCTGATGGAAAGAGACTCCTGCCCCAGATTCCTGCAGTCAGATGCATACCTGAGTCTAAAGCACAAATCCAAGAGTCTGTGGTATATTTAGCTCAAAAAACTGTATCAAAAGTGATTTTCTAAtcctcacttttttttctatttggcTGAATTGAAAAGTTATTTAACACTGTATGAGATGTGAAGCCTGGATGAAAACAGTTATTTTAAGGGCAGAGCATCTCTCTATTGCTCTTAACCTAGACTGAAACAATGTTTTCAACCATGTGCAACATCAACCTGTTTTATATGAGGGAAAGATGATGAAATGTTGTAGAAAAGGGCAAAGTAGGAAGAGAGAAAAGTAACGTGAGTGGGGAAAAGTATATGCACGTAGGAGAGAAAGAATGCTGTTGGTAGTACACGACGATTGTGCAGAGTATGGAGTTGAATCATCATCAATAGTTTTCATTAAAAGTTTCATAAATGGGAATTTAATTCAAAGTTTTACATAATCGTGACTTCTTGACCATCTTTGGATACATTTCGTGAGATGCGTAGTTGTCACCCATCGTCTGTAACTATTCTTAATATTCTGACTATTTTCCATATAGTCATCATTTTGAGACAAAGATTTATATTTATCTGACTGACAGTCTAACTGGAGGTGTGGGGATGGGCATGAGTCAAAACCTTAAAAAAGAGAACAGTTTCCACAGCTCACCCAGCAAGGAGATTCGGTCTTTGGTCACGTGTCCTATATATCCTCTAATTAGGTGCATAGATGACTCCACACACCAGCAATAGGGTTTACTTAAACTGGAAAAAAGTAACCCTTGATCTCACACTCTTCTGTAAATGGCCTTATTCCTAAAAATTGTGCCTTAAAAAGGAGTACTGAGGCAGCTAATAATAACTCGGAGGGCTTAAACGACAACACTGGAGTCATCAGACAACCTCATGCTTAACAGATCAGGCTGGATGTGCTGCCTTGTTAGGGGAATAATCTCATCACCCACAGACAATGATGGCAGAGATACACAAGTGCTTTGCTGAGAGAAATAACTTGAAAGATGTAGTAGCACTTTGGGAAAAGATCATATTGTTCaaattaaagtattaaaaagtgGAGAATAAAACCCGAGGATAAGCTTTTCATAATCCACGTAAACAAAGGTTTATGTGTTATGGGTGAAACTTTACGAAGCTTGTTTTGTTTCAGTCTATCCAGTCGTACGTAGGAAATGGCAggaagcaaaaaagaaaatattaaagaCGAAGTGAGCTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810130.1 True 2324 mRNA 0.41 5 9057341 9062036

Neighbor

gene id symbol gene type direction distance location
LOC120564973 LOC103367494,LOC104965670,LOC104935957 coding upstream 23661 9021517 ~ 9033680 (+)
rgs4 NA coding upstream 842841 8208453 ~ 8214500 (+)
LOC120565295 tsta3,LOC104953080 coding upstream 1183355 7868591 ~ 7873986 (+)
LOC120565646 LOC103354728,LOC102290039,LOC107394705 coding upstream 1189613 7862214 ~ 7867728 (+)
LOC120564954 foxc1,LOC104932399,LOC104963658 coding upstream 1451711 7603460 ~ 7605630 (+)
LOC120566074 LOC104935955,LOC103367504 coding downstream 5142 9067178 ~ 9070676 (+)
LOC120564889 rgs2,LOC103367537 coding downstream 18823 9080859 ~ 9083857 (+)
LOC120566012 NA coding downstream 344674 9406710 ~ 9505927 (+)
LOC120566014 NA coding downstream 400409 9462445 ~ 9473374 (+)
trnah-gug_12 NA coding downstream 510262 9572298 ~ 9572369 (+)
G94169 NA non-coding upstream 55635 9001456 ~ 9001706 (+)
G94167 NA non-coding upstream 56881 9000163 ~ 9000460 (+)
G94153 NA non-coding upstream 403917 8653056 ~ 8653424 (+)
G94151 NA non-coding upstream 441707 8614911 ~ 8615634 (+)
G94075 LOC104926357,LOC103367455,LOC102788643 non-coding upstream 777369 8278804 ~ 8279972 (+)
G94192 uchl5 non-coding downstream 27792 9089828 ~ 9096292 (+)
G94201 NA non-coding downstream 107283 9169319 ~ 9169757 (+)
LOC120566015 NA non-coding downstream 372685 9434721 ~ 9437621 (+)
G94232 NA non-coding downstream 421967 9484003 ~ 9485965 (+)
LOC120566016 NA non-coding downstream 431945 9493981 ~ 9495357 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other upstream 770905 8237370 ~ 8286436 (+)
LOC120565614 NA other upstream 1152094 7896145 ~ 7905247 (+)
LOC120565294 pycrl other upstream 1167164 7878919 ~ 7890177 (+)
G93938 NA other upstream 1706754 7349810 ~ 7350587 (+)
rhpn1 rhpn1 other upstream 2675743 6354892 ~ 6381598 (+)
G94199 LOC103367571,LOC102312400,LOC100710958,LOC101467655 other downstream 85126 9147162 ~ 9168877 (+)
LOC120566011 NA other downstream 322469 9384505 ~ 9543535 (+)
G94239 NA other downstream 490260 9552296 ~ 9557568 (+)
G94281 NA other downstream 755585 9817621 ~ 9879198 (+)
LOC120565620 NA other downstream 782235 9844271 ~ 9846275 (+)

Expression


Co-expression Network