ephx4 (ephx4)


Basic Information

Item Value
gene id ephx4
gene name ephx4
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 30245804 ~ 30261307 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810148.1
TGGAGTGGCTTATTGCTTGATTTCGGACTTGCCTTGTATCGTCAACAGCACCGTCTCCTGCTAAACAACCACTCCTGTCACACGCAAGCGTGAAATCTGACGTGATGCTCTTGCCACCGTCCCGTTCAACCGTTTGTTGGGAACCTCCCTTCAGACAGTCGTGCGTATGCGCTGGTAACGACACAACCGCATTGTCAGAGCAGTATTCAAACTGAGCCGAGCGATTACCAGAAAGAAACCAATAGGTAACTTGATCTGGATTGATATCCTGCGGCAATGTAAAGATGGCGAGAGTGCTTCACAACTTGCTGTTATTTCTAATCAGACTTGCGCTGAAAATTCGAGTTTTGGGGTATTGGTCATTGATATACGGTTATTGTGCTCTTTGCACCACCGTAGCCCTGCTGAAACTTTGGTGGAACATCATCTTAAGGCCGACAACAACCTTCCAATGGGGGGTTCGTGAAACTCCTCCGGCTTGTCTGAATGACACGTCCTTGGGAACCCACTGTTATGTTAGGATCAAGGAATCTGGCCTTAGGTTTCACTATGTTGCTgctggagagagaggaaagccGCTCATGCTGTTTTTACACGGCTTCCCTGAGTTCTGGTTCTCCTGGCGCTACCAGCTACGCGAGTTTAAGAGTGAATTCCGTGTGGTGGCCATCGACATGCGGGGCTATGGGGAGTCCGACTTGCCGCTCTCCACTGAAAGTTATAACTTCGACAACCTGGTTACAGATGTCAAGGATATTGTGGAGTACCTAGGATACAACAGATGTTGCCTTGTTGGCCACGACTGGGGTGGGACCATAGCATGGCTGTTCGCCATTCACTACCCAGAGATGGTGACAAAACTCATCGTCCTAAACAGCCCCCATCCTTCTGTGTTCTCAgATTACGCGCTGCGTCACCCGAGCCAGCTGCTGAAATCCagtcatttcttcttcttccaacTGCCCCGCTTCCCGGAGCTCATGCTCTCCATCAATGATTTCAAGGCTCTGAAGGCCTTGTTCACCAGCCGCAGCACAGGGATCGGAAGGAAAGGCCGATGGCTCACTGCAGAGGACTTGGAGGCCTATCTGTATGCACTCTCACAGCCGGGAGCTCTGACTGGAGCCCTCAACTATTACAGGAATGTCTTCAGCTCCCTCCCCCTGAGCCAAAATCATGTCAGATCAccggtgctgctgctgtggggTGAGCGGGATGCCTTCTTGGAGCAGGAAATGGCAGAGGCATGTCGCCTCTACATCCGGAATCATTTCCGTCTCAACATCATTTCTGGGGCCAGTCATTGGCTGCAGCAGGACCAACCTGATATTGTGAACACCCTCATATGGACCTTCCTCAAGGAGGGCGAGGGACGCAAAAGCTACAGGAACTAAATCCACAGCGaggcctcctccagccctccCCTTGTCCTTCTTGCTTGCCACACCTGGAAGCCTGGAATATGCCTGTGATACCAAGCAACATAGTAATAATGCAATCATTCTTTAAatctttcaaatattttttaaagaagtCAGCAGTAAAGGAAAGAATCAAAGCACACTTCACTGGAGAGGACACAAAGCAGTATGTTTGACACATATTCAAGATGTTTTTTGCACATGACATCCGCCTTAAAGTTTGTCAGTTACAGCATTACAAATGTTTGGCAAAATCTCCTTGTGACTTGTATTGTGTGGTGCCTTTTTACTTTCGAGTAAAGATTTCCTGAGAGATTGGGATGTGGCGTTGTCTGCTATACTTATATGTATCACTGGGTCGCTCCACTCTTCTTTGGGCACAGTCCTTTGGGAGCCATAACTCTCCAACTCCCTTTATCAGGTAGTGTTGTCTAaaggagttttctttttttgtatttttttcctcaGAAATACTCAAATGTAGAGAATGTTGTTATTATGATCTTCATGTATATAAATGTCAGTGATGGTTGACTATTGTACTATTTTGTATCTATTCCTACACGCTGCATTTTGGAATTCACTGAGCCAGGTCTACACCAtttgattttataaataaactaaGTGTCAATCTGTTGGACTACA

Function

symbol description
ephx4 Predicted to enable hydrolase activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to several human genes including EPHX4 (epoxide hydrolase 4).

NR:

description
epoxide hydrolase 4

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K22369 EPHX4; epoxide hydrolase 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810148.1 True 2066 mRNA 0.47 7 30245804 30261307

Neighbor

gene id symbol gene type direction distance location
brdt NA coding upstream 886 30201532 ~ 30244918 (+)
lrrc8db LOC102192663,LOC101487848,LOC104931916,LOC103368774 coding upstream 473120 29763669 ~ 29772684 (+)
lrrc8c lrrc8c coding upstream 490395 29742393 ~ 29755409 (+)
lmo4b lmo4 coding upstream 809308 29422379 ~ 29436496 (+)
hs2st1b LOC103365674,LOC100712187 coding upstream 872338 29352402 ~ 29373466 (+)
btbd8 kiaa1107,LOC103368715 coding downstream 1670 30262977 ~ 30311025 (+)
LOC120565064 clg23h1orf146,LOC104946869 coding downstream 49895 30311202 ~ 30314472 (+)
LOC120565665 LOC103368809,LOC104921761,LOC103397662,LOC101078338,LOC106584167 coding downstream 135961 30397268 ~ 30403012 (+)
scinla NA coding downstream 189394 30450701 ~ 30460738 (+)
dr1 dr1 coding downstream 216524 30477831 ~ 30481380 (+)
G99368 NA non-coding upstream 53964 30185707 ~ 30191840 (+)
G99356 NA non-coding upstream 204909 30039842 ~ 30040895 (+)
G99338 NA non-coding upstream 367683 29877872 ~ 29878121 (+)
G99329 NA non-coding upstream 470724 29774317 ~ 29775080 (+)
G99327 NA non-coding upstream 485438 29760043 ~ 29760366 (+)
G99382 NA non-coding downstream 25757 30287064 ~ 30288117 (+)
G99406 NA non-coding downstream 127514 30388821 ~ 30389639 (+)
G99461 NA non-coding downstream 201253 30462560 ~ 30463389 (+)
G99488 NA non-coding downstream 260338 30521645 ~ 30522066 (+)
G99493 NA non-coding downstream 267519 30528826 ~ 30529088 (+)
G99297 NA other upstream 580714 29663633 ~ 29665090 (+)
ralgps2 ralgps2 other upstream 1380317 28775375 ~ 28865487 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other upstream 1471251 28772362 ~ 28774553 (+)
LOC120564865 NA other upstream 2099479 28137269 ~ 28146325 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other upstream 2161417 28027964 ~ 28084387 (+)
si:ch73-389b16.1 ccdc18 other downstream 166196 30427503 ~ 30429291 (+)
G99545 NA other downstream 549211 30810518 ~ 30811236 (+)
slc1a7b LOC103368436,LOC102788729,LOC102303821 other downstream 834574 31095881 ~ 31302827 (+)
LOC120564930 NA other downstream 1352582 31613889 ~ 31643446 (+)
G99791 NA other downstream 1361391 31622698 ~ 31625796 (+)

Expression


Co-expression Network