LOC120564926


Basic Information

Item Value
gene id LOC120564926
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 28521773 ~ 28523624 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810195.1
ATGGCTTCGAGGAAGACCGGGATTGTTTGTGCAGTTAGAGGGTGTCATAATAACTGGTACAAAAGAAAACTTTACTTGGAGcaggagtgttttaatcacCGAACGCGTATGAGAGCTGAATGTGGATGCGATGCGCCCTTCGACCTTTACCCGCCGCCGAAGAATGAGGAATCCCTTCGCCTGTGGTTAAAAGCTTTAAATTTGAAGAAACCACCAAAGCAACCgtatgtttgttcttttcatttcgtGAACACAAGACCTACAGAAGACCACCCGATACCAGAAAAGTGGCTGGGCTACGAAGTCCCAATAAAAACTCCAAGGAGACGTGTCAGGAGGTTAGCAGACACAGATGACAGCCACTGTGTTGAGGAAGCTGACCAGGCCGTTCCACAGTCAGAGTCACCTACGCATAAAGATGCTGACACTCAGTGGGAGGTTCAGGCACTGATGGATCACACCTACATATTAGGACAAAAGAAGAATCATGTATGCGACAGAGAAATACAATGTGGTGGAGAAGAACCCCTTGCCCATGCCATCCTGAAAAATGACACTAGCTGTGTGTTGTACACAGGCCTTTCTCTCAGTGTCTTTTTTGATCATGTTAAATATCTGGAACAGTTCTATAAAGCAAACTTTAAGATGCACGTAATGGATCAAATATTGATGACCATGATGAAACTTACGTTGAATCTACTCCAGGGTGATCTTGCAGAACGCTTTGCTGTGTCCCAGGGGTTAGTGAGCAGGATCCTCTCCTACTGGATAGACACAATGGAGGAGCACATGAGAATCTACATTCCTTGGCTGCCACGGGAGACAATCCGGAGCACAATGCCTCAGTGCTTCAGGGAGAAGTTCCCCAACATCCCCTGCATCATTGACTGCACTGAGACCACCCTGCAGAAACCACACAACCTTGACTCCAGAGGAGAGTCATACAGCCATTATTATTCCAGCAATACTATAAAGTATTTAGTTGCTATTGCCCCGTGTGGGCTTGTTATGTTCATTTCTCCTGCTTATGGAGGCAGGTGTAGTGACAAGTTCATCACTCAGGAGTCTGGCTTCCTGGAGTATCTTCATCCCGGCGATGAAGTGATGGCAGACAGAGGCTTTACCATCAGAGATCTGCTGTTTGAGAGAAAGGTTAACCTTGTTCTACCAGCGTTCACTCATAAAGGAGGGCAGTTGTCTGATGAGGATGTAACTGCCACAAATAGGATTGCAAATGTGCGCATACATGTGGAAAGGGTTATCAGGAGGCTCAAAGTGTTCAAAATAATCTCCCAGACTGTACCCATCAACTTGGCACACAAAATGGACAAAATCCTCAGAATCTGTGCAGCCCTTGTAAACATGCAGGGGGAAATCATCCATGAGGATGCTGATTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810195.1 True 1398 mRNA 0.46 2 28521773 28523624

Neighbor

gene id symbol gene type direction distance location
LOC120565126 LOC104959127 coding upstream 142742 28373583 ~ 28379031 (+)
LOC120565127 LOC101485093,LOC102207510 coding upstream 168017 28346415 ~ 28353756 (+)
serbp1a LOC106917776,LOC106949688,LOC103463733,LOC104930792 coding upstream 252134 28261055 ~ 28269639 (+)
hsd17b7 hsd17b7,LOC100698819 coding upstream 264169 28253295 ~ 28257604 (+)
ddr2a ddr2 coding upstream 268643 28218202 ~ 28253130 (+)
LOC120564927 LOC103354187,LOC101478050 coding downstream 29006 28552630 ~ 28565249 (+)
si:dkey-183n20.15 LOC104925996,LOC104959169,LOC100703951,LOC102207780,LOC101477488 coding downstream 53968 28577592 ~ 28585350 (+)
LOC120565214 LOC103376736 coding downstream 116122 28639746 ~ 28649744 (+)
mmachc mmachc coding downstream 136314 28659938 ~ 28663278 (+)
echdc2 echdc2 coding downstream 223365 28746989 ~ 28755022 (+)
LOC120565132 NA non-coding upstream 61563 28449543 ~ 28460210 (+)
G98972 NA non-coding upstream 202885 28312594 ~ 28318888 (+)
G98770 LOC104966597,LOC101073477 non-coding upstream 639462 27879317 ~ 27882311 (+)
G98766 hapln4 non-coding upstream 662650 27855676 ~ 27859123 (+)
G98763 NA non-coding upstream 672835 27848733 ~ 27848938 (+)
G99007 hook1,LOC102781169,LOC106584290 non-coding downstream 46024 28569648 ~ 28570858 (+)
G99108 NA non-coding downstream 164258 28687882 ~ 28688118 (+)
G99189 NA non-coding downstream 446863 28970487 ~ 28972086 (+)
LOC120566147 NA non-coding downstream 468604 28992228 ~ 28992610 (+)
G99217 NA non-coding downstream 495911 29019535 ~ 29034406 (+)
LOC120564865 NA other upstream 375448 28137269 ~ 28146325 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other upstream 437386 28027964 ~ 28084387 (+)
ncanb ncan,LOC104966594,LOC107554802 other upstream 688918 27659696 ~ 27832855 (+)
si:ch211-212d10.2 LOC103371119,LOC104950605,LOC100693321,LOC101487565,LOC102778050 other upstream 1144719 27372809 ~ 27377054 (+)
micos13 LOC104918748,LOC103371279,LOC104964520,LOC106536194 other upstream 1725486 26791729 ~ 26796287 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other downstream 248738 28772362 ~ 28774553 (+)
ralgps2 ralgps2 other downstream 251751 28775375 ~ 28865487 (+)
G99297 NA other downstream 1140009 29663633 ~ 29665090 (+)
si:ch73-389b16.1 ccdc18 other downstream 1903879 30427503 ~ 30429291 (+)
G99545 NA other downstream 2286894 30810518 ~ 30811236 (+)

Expression


Co-expression Network