LOC120564927 (LOC103354187,LOC101478050)


Basic Information

Item Value
gene id LOC120564927
gene name LOC103354187,LOC101478050
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 28552630 ~ 28565249 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810196.1
ATGTGGCTTTATAATTTTTTGCTGGGTTTTGGCCTGAAAGGGCTTTtcctgtttatttttatttctatccTAATAGCAGACTTCCTAAAATTCAGGAATCCTCCAAATTATCCTCCAGGACCTTTGGCTCTTCCCCTTGTTGGATGTTTCTTCCGTGTAGACATGAAACAtccacacatttattttactaAGCTGGCTGACATCTATGGGAATGTGTTCAGTGTCCGCCTTGGCGGTAAgaagatggtgtgtgtgtctgggtacAAGATGGTGAAGGAAGCCATAGTGACACAAGCTGAGAATTTTGTGGATCGACCATACAGTGCAATAGTTGACAGGTTATACTCAGGAGACTCAGGTCGTGGTCTGTTCACAAGCAGTGGTGAAAAATGGAAGAGGCAGCGACGCTTTGCCTTGTCTACCTTACATAGCTTTGGCCTGGGCAAAGGTACCATGGAGCAGAGTATCTGTGAGGAAATCCGACATCTGCAGGAGGagatagagaaggagaaagGTGAACCTTTCAATCCAGCAGGCTTCTTCAACAATGCTGTGTCCAACATCATTTGCCAGCTGGTGTTCGGGAAACGGTATGACTACAACGACCACAACTTCCAGACCATGCTGAAGAATATTTCTAAAGCTTTTAGGCTGGAGGGCTCTGTATGGGCTACGCTGTATGAGTCATTCCCTGGAGTGATGAAGCACTTACCAGGTCCTCACAACGAAATATTCAGCAACAACTACGCCATCCTAGACTTCATCAATCAGGAGATAAAGAGTCATAAGAAGGACCTGCAACACAGCGATCCCAGAGACTACATTGATGCTTTCCTCATTGAAATGGAGAATCACAAAGAGACTGATCTGGGCTTCACTGAGATTAATCTGGCCATATGCACTCTGGATCTATTCTTGGCTGGATCAGACACAACCTTCACTACTTTGCTGTGGGCTTTGGTTTTCCTCATCAAAAACCCTGATATTCAGAACAAAGTCCAGGAAGAGATAGACAGAGTGATCGGACAGACCCGACTGCCCAGAATGGCCGACAGACCTAACCTGCCCTACACTGACGCTGTCATCCACGAGATCCAGAGGATGGGAAACATTGTTCCTCTCAATGTACTTAGAATTTCTGCCAAGGACACAACACTGGGTGGTTACATCATACCCAAGggtACATCCTTGATGCCCATCTTGACCTCTGTGCTGTTTGACAAGACTGAATGGGAGACACCAGACACCTTCAACCCTGGACACTTCCTAGATGCTGAGGGAAAGTTTGTGAAAAGAGATGCTTTCCTGCCTTTCTCTGCAGGGAAACGTGTGTGTCTCGGAGAAGGCCTCGCCAAAATGGAGCTGTTCCTGTTTTTGGTCGGTTTACTACAGAAGTTCTCTTTCTCCGTTCCTGATGGAGTAGAGTTAAGTACAGAAGGAGTTACTggaataacacgtgtaccgcaCCCCTTCAATGTTTACGCCaagGTCAAAGTCAGAAACAGTTCAGAAAGAGTTCTGAGCTCGGATTTCCGAGCTCAGAACTCGGACAACCATGGAGTAGCCCAACTTGGAGTAGCCCaagttcaaaatccaacatggctgccccctCTATTAACCAagggggAAGTTGATGATGAAGCAAGTAATCTTCTTCAGTCCTTtgctcctctcctctgcctCACAATGTGGCTGTGCGATTTGTTTCTGTGGCTTGATCTGAGGGGAatgctgctttttatttttgccGTTCTCCTCGTAGTGTATTTTCTGAACAAAAAGGATCCACCCAACTTCCCACCAGGACCAccatctcttcctcttttaGGAAACGTATTCAACATTGAATCTAAACAGCCTCACATTTACTTAACCAAGCAAGCTGATGTTTATGGGAATGTGTTCTGCATTCGTCTGGGAAGACAaaaaacagtgtttgtgtctggGTGGAAGATGGTGAAGGAAGCAATTGTCACACAGGCTGATAACTTTGTGGACCGGCCTTACAGCCCAATGGTGACCAGGATTTATTCAGGGAACTCAGCGGGTCTTTTCTTCAGTAATGGCAATGTGTGGAGGAAACAGCGGCGTTTTGCCATGGCCACGTTACGTACCTTTGGCTTGGCCAAGAGCTCCATGGAGCAGAGCATCTGTGAGGAGAGTCATCATCTGCAGGAGGCGATGGAGAAGGAAAAAGGTGAGCCATTTGACCCTGTGCCCCTCTTAAATGACGCTGTGGCCAACATCATCTGCCAGATAGTGTTTGGGAGACGGTTTGACTACAGCGACCACAACTTCCAGAGCATGCTAAAGAATCTGACTGAGATGGCTTATCTGGAGGGATCCATATGGGCTCTACTATACGAGGCGTTCCCAGCACTGATGAAACGCCTGCCGGGGCCTCACAATGGCATCTTCAGCAGCTCCAAATGTTTGGAGGCATCTATCAGGGCAGAGATAGAGAGGCACAAGTTGGATCTGGACCCCAGCAACCCCCGAGATTATATCGACACTTTCCTGATAGAGGAGAAACGCAACAGAAACAGTGAACTTGGTTTTGATGATGGCAACCTGGTTCTGTGTTGTCTGGATCTGTTCCTGGCTGGTAGTGAAACCACTTCGAAGACCCTGCAGTGGGGGCTCATCTACCTCATCAAGAACCCTCATATCCAGGACAAAGTCCAGGCCGAGATAGACAGAGTGATCGGACAGACCCGACTGCCCAGAATGGCCGACAGATCTAACCTGCCCTACACTGACGCTGTCATCCACGAGATCCAGAGGATGGGAAACATTGTTCCTCTCAATGGACTTAGAATGGCCGCCAAGGACACAACACTGGGTGGTTACGTCATACCCAAGggaacCTCAGTGATGCCCAACCTGACCTCTGTGCTGTTCGACAAGACTGAATGGGAAACTCCAGACACCTTCAACCCTGGACACTTCCTGGATGCTGAAGGGAAGTTTGTGAGGAGGGATGCATTTGTACCTTTCTCGGCAGGAAAGCGTGCATGTCTGGGCGAAGGCCTGGCAAGAATGGAGCTGTTCTTGTTTGTTGTCGGTTTGTGTCAGAAATTTAATTTTTCCACTCTGGATGGACTTGAGCTGAGTACAGAGGGAGTCATTGGAGCCACACGCACACCATACCCCTTTAAGATCTATGCCCACGCCCGCTAAACCCTGCAACCTGTCCTCTACTATAGACTATATGATACAGTAAAGCCAAAAAAGATTATACATCTTTTATACAAAGACGACACATGCTGCATCCGTGACTAATTTTTCTGTCAGTACAAAAATGCCAGTACCATTCAAGTTTTTAAACCAGTCCAGTTGAGGCAGCATTCAACTGTATGTCTTGTCTATAATGGCCGgatgtggctcagtggtagatcGGTCGCCTGCCAGTCGGAAGGTTGGCCCTCCTGTGGTGGAAGTTTCATGCAGCAGAGTGAGTAAAGATGTCTTCAATAACAAAAGATGAGGAAAATCTAATTGTCttggtttgttttattactttcaAGCAGAAACACAACTTTCACAAAACATCAGAGTGCAATGTGGAAGAGTTATTGCTTATATCTCGAGAGTTGACAGCTGGTTTCACCGCACTGCTACAGAGTGCAGAGAAAGAGCTCTCAAAGTGCATGCAGAATGTCAGCATCCTTTATACACAGAAAGAGGAACATGTAAAGAGGAACACCCAAAATGGTCCCTGATAAGttgaaactttaaaaacaggaacTGCCTAAGCACGCTTGTGTCTGGGTAATGATAATGTCTCACAGCCATCCTACTCTTACAGCCTGAAAATGCCGTCTTCATGACCTTAGGTTGAACCACAGAACAAGCGGTGTCTGTTATGCAGATGCTGACGCGATTGAATATAACAAAAACAGTTTCTGTTCGCTCTTAGTAACCTTTTTCCAATACAAAAGTGTTCTTGTTTCAAGTAAGCATAATTCATAATCATAACATTTTCCATTACactgcagtcccatgtcaaagtctccttgggcaagacactgaaccccaagttgcccccgatgatgagcaggtggcaccatGTACAGCAGCCTTGGctacagtgtgtgaatggttcctgtaataTGTAAAAGGGCTttgactagaaaagcgctatataaaaacagttttCATTGCTGAAAAACATTTCCATTTATAACATGTCAAATACTGGAGCTGATGTTGGCACAAGGGAATGTTTCATATGTTACAAACTATAACATGCTTGGTTTTGCCTTATGATCATGCCACATAATCACGTTTCCTGATACAATATATGATTTCAGATGGACTATTGGccactataaaaaataaatgttaccGAAAGGCCA

Function

NR:

description
PREDICTED: cytochrome P450 2J1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810196.1 True 4358 mRNA 0.46 19 28552630 28565249

Neighbor

gene id symbol gene type direction distance location
LOC120564926 NA coding upstream 29006 28521773 ~ 28523624 (+)
LOC120565126 LOC104959127 coding upstream 173599 28373583 ~ 28379031 (+)
LOC120565127 LOC101485093,LOC102207510 coding upstream 198874 28346415 ~ 28353756 (+)
serbp1a LOC106917776,LOC106949688,LOC103463733,LOC104930792 coding upstream 282991 28261055 ~ 28269639 (+)
hsd17b7 hsd17b7,LOC100698819 coding upstream 295026 28253295 ~ 28257604 (+)
si:dkey-183n20.15 LOC104925996,LOC104959169,LOC100703951,LOC102207780,LOC101477488 coding downstream 12343 28577592 ~ 28585350 (+)
LOC120565214 LOC103376736 coding downstream 74497 28639746 ~ 28649744 (+)
mmachc mmachc coding downstream 94689 28659938 ~ 28663278 (+)
echdc2 echdc2 coding downstream 181740 28746989 ~ 28755022 (+)
fam20b fam20b,LOC102783880 coding downstream 300394 28865643 ~ 28887058 (+)
LOC120565132 NA non-coding upstream 92420 28449543 ~ 28460210 (+)
G98972 NA non-coding upstream 233742 28312594 ~ 28318888 (+)
G98770 LOC104966597,LOC101073477 non-coding upstream 670319 27879317 ~ 27882311 (+)
G98766 hapln4 non-coding upstream 693507 27855676 ~ 27859123 (+)
G98763 NA non-coding upstream 703692 27848733 ~ 27848938 (+)
G99007 hook1,LOC102781169,LOC106584290 non-coding downstream 4399 28569648 ~ 28570858 (+)
G99108 NA non-coding downstream 122633 28687882 ~ 28688118 (+)
G99189 NA non-coding downstream 405238 28970487 ~ 28972086 (+)
LOC120566147 NA non-coding downstream 426979 28992228 ~ 28992610 (+)
G99217 NA non-coding downstream 454286 29019535 ~ 29034406 (+)
LOC120564865 NA other upstream 406305 28137269 ~ 28146325 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other upstream 468243 28027964 ~ 28084387 (+)
ncanb ncan,LOC104966594,LOC107554802 other upstream 719775 27659696 ~ 27832855 (+)
si:ch211-212d10.2 LOC103371119,LOC104950605,LOC100693321,LOC101487565,LOC102778050 other upstream 1175576 27372809 ~ 27377054 (+)
micos13 LOC104918748,LOC103371279,LOC104964520,LOC106536194 other upstream 1756343 26791729 ~ 26796287 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other downstream 207113 28772362 ~ 28774553 (+)
ralgps2 ralgps2 other downstream 210126 28775375 ~ 28865487 (+)
G99297 NA other downstream 1098384 29663633 ~ 29665090 (+)
si:ch73-389b16.1 ccdc18 other downstream 1862254 30427503 ~ 30429291 (+)
G99545 NA other downstream 2245269 30810518 ~ 30811236 (+)

Expression


Co-expression Network