LOC120564983 (LOC100690982,LOC103357424,LOC102799593,LOC101477196,LOC104919101)


Basic Information

Item Value
gene id LOC120564983
gene name LOC100690982,LOC103357424,LOC102799593,LOC101477196,LOC104919101
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 38179031 ~ 38188686 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810259.1
CTTCTTCAAGAGGTCAATAAGAGCTTCGTGACACTGAGCATCTTTCCACAGTACTGctccctgcctgtctgcctgcctgtctgtctttctacctgcctgcctgccttccgTCACAACTGCTTTACCTTTACTGCTGAGCTAACACTCGCTAGTTGCTAGTTTCAATCTCTCCTCTGCAGAAAATCCAAACCTGGAGAAGCATACTTGTCAAGTCAGTGAGTCATTGTCagtttggagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagcggtgaTGAATGACGGTGCTGACTGCAGAACTGGACCTGGGCCCTAACCTGAGGAGAGAGTGATATAGCTAGTAGAGAGAGGTAGAAACAGATTTCAATAGAGGGAGAGagtgcaagagagagagagagagaaagatagagagcGCGCGAGAGagacaagaaagagagagaaagagaccgTGCTTACTTTTTGGTTGCCGAGAGAGCCGCGTGACAGTTTGCAGATGCCGACAGATGTGCCCGAAGACAGGCTCCACGACGAGGAGGCGGCCAAGTGTGACAGAATGACTCTGCCCAGCACCTGGTCCCCGACCGTTCGCAGAGGAAGCACTCCTCTGCCTATAAAGCACCAGCTCAGACGAGAAGAAGCTGTCCACGATGACTGCGATTGGACGTCAGGTGCAGCTGGACCTTCTGCTTCACCAATCAGCTTCAGCCCAGCCTTGGAGGACActgtgactgtggctgtggaggGCAGACCTGATGGGCCCTACAGGATCGCCCTGCTGGGGCAGAACGGCGTGGGGAAGTCTTCTCTGGCCATCGCCCTTGCTGGGGACATGGACAGGACTGCGTCTGTGGATTCCGAAGGGGAGGGTTACGTGCGCATAGTCACCGTGGATGACGAGGAGAGCACCATCATTATCTATGACAACTGGAGACAGGACCTGTCGGCTCTGCAGTGCGaggtgtgtgtgctggtgttcTCAGTCACTGACAGGCGGAGTTTCCACCGCACTGCTCAACTCCGACTTCTCCTGAGAGAGACTCAGCCCCAAACTCCCATCATCCTCGTCGGCAACAAGAGTGACCTCGTTCGCACGCGTGAGGTCACCTCTCAAGAGGCCATGTCCAGCGCCGCTCTCTTCAACTGTCTGTATCTGGAGATCTCTGCCTCTCTGGATCACCGTACTCAGGAGCTGCTGGAATGCGCGGTGCGGCTAACCAGGGGCCAGTCCCCCTGGCCCCCGGGGACCAGTGCGGAGGACATGAGCGGCAGCCAACGGGAGAGCATCACCTCCCGTGCCAAACGTTTCTTGTCCGGCCTAGTGCCCCGGTACCCGCGAGAGCGAGAAGTGAGCAAGTTCATGAGGCAGAAGTCCCGCTCGTGTCACGACCTGGGGGCGCTGTGACCGGTTTGCCGCGGGGAGCTGGATGCTTAGATGGTTAACAGAGGTAGCTGGAAGGTGATGTAGAATACCAACAAAGAGAGGGAACAAGCGGTGGACAAGAGAGAGGGCTATGGGAGTAACGGAGGAGGTGCGAAGGTGCCAGAGTGACGGCGGGACAACGGTATGAGGGATCATCGTGTGCGTCCAGCAGAGGGAAATAGGGAGAATGACAACAATTTTAATGATGATGTTAGTTTATCCATAGGATGATATAGAAATTTGGTTCACAAGACCAAaccaaaaagagaagaagataAAAAATACTGTTGTAGAACACGTGTAAATAAACTGTAGTAGTGATGTTTAACTGCCACACAGGTTTGAGAGCTAAATAAATAGCTTTTTTGAGTCTTGAGAGTCA

Function

NR:

description
PREDICTED: GTP-binding protein REM 2

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810259.1 True 1854 mRNA 0.53 6 38179031 38188686

Neighbor

gene id symbol gene type direction distance location
nrl LOC104947091,LOC103357430,LOC105353878 coding upstream 668 38168461 ~ 38178363 (+)
LOC120565755 LOC103357426,LOC102194044,LOC102293839,LOC102798827 coding upstream 42851 38093026 ~ 38136180 (+)
impact hrh4,impact,LOC100712525,LOC102292561,LOC101478323,LOC102218847,LOC105928845,LOC103137092,LOC103376683 coding upstream 188755 37951158 ~ 37990276 (+)
LOC120565667 hrh4,LOC104967234,LOC100712525,LOC102292561,LOC101478323 coding upstream 194289 37983334 ~ 37984742 (+)
lama3 NA coding upstream 263984 37890292 ~ 37915047 (+)
ppat ppat coding downstream 10310 38198996 ~ 38209487 (+)
aasdh NA coding downstream 29129 38217815 ~ 38235264 (+)
chst14 chst14 coding downstream 71839 38260525 ~ 38263359 (+)
nmu NA coding downstream 119188 38307874 ~ 38314350 (+)
clocka clock,LOC102778122 coding downstream 129247 38317933 ~ 38344663 (+)
G101081 NA non-coding upstream 116359 38057588 ~ 38062672 (+)
G101080 NA non-coding upstream 132208 38046044 ~ 38046823 (+)
LOC120565003 NA non-coding upstream 163757 38013189 ~ 38015274 (+)
G101066 LOC108281047 non-coding upstream 180328 37998455 ~ 37998703 (+)
G100978 NA non-coding upstream 205840 37956604 ~ 37973191 (+)
G101130 NA non-coding downstream 11883 38200569 ~ 38201905 (+)
LOC120565354 NA non-coding downstream 58842 38247528 ~ 38248312 (+)
G101208 NA non-coding downstream 180011 38368697 ~ 38370401 (+)
G101211 NA non-coding downstream 183878 38372564 ~ 38372975 (+)
G101232 kit non-coding downstream 271988 38460674 ~ 38463579 (+)
G100843 NA other upstream 688959 37463914 ~ 37490072 (+)
prrc2c NA other upstream 1220671 36932655 ~ 36958360 (+)
G100671 NA other upstream 1480162 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 1567285 36596041 ~ 36611746 (+)
smim24 NA other upstream 1644449 36495484 ~ 36534582 (+)
usp46 usp46 other downstream 677749 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 1134898 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 1265434 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 1372375 39561061 ~ 39592762 (+)
LOC120565298 cdkl5,LOC103356958 other downstream 1505226 39693912 ~ 39740277 (+)

Expression


Co-expression Network