dhcr24 (dhcr24,LOC102794897)


Basic Information

Item Value
gene id dhcr24
gene name dhcr24,LOC102794897
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 37782584 ~ 37791624 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810283.1
CACTCACCTATCGCAGTGAAGGGGTGATCGGTTTGGGTTTGGCATAATCGATGCAGAGTTCTCCCCCCACATGTATCTCCCAGCGGTCAGTTTAATAGTTTAACTAAAGAGTGTGTCAGATAGCCGACTTTAGTTTGGAGAACGTTCCCATTTGGATCGGAACTGTCCACAAACGATGGACTCGCTGTTGTATTTAGCCGGCTTGGTGGTTTTGCTCCTGCTGTGGATCAAAGTCAAAGGTCTAGATTACGTGATCGTTCACCAGCGGTggatctttgtgtgtttgtttctgctgCCGCTCTCCGTTATATTTGATGTGTATTATTATGTGCGGGCATGGCTCATTTTCAAGATGTGCTCTGCGCCCAAACTGCACGACCAGCGCGTGCGGGACATCCAGCGACAGGTGCGTGAGTGGAGGAAGGACGGCAGTAAGACCTACATGTGTACGGGTCGGCCCGGCTGGCTCACCGTATCTCTCAGAGTGGGGAAATACAAGAAAACCCACAAGAACATCATGATCAACATGATGGACATTCTGGAGGTGGACACAAAGAGGCAGGTGGTGAGAGTAGAACCGCTGGCCAACATGGGTCAGGTGACTGCTCTCCTCACCTCTATTGGCTGGACACTGCCTGTGCTGCCCGAGCTCGATGACCTCACTGTGGgTGGTTTGGTGATGGGTACAGGCATTGAGTCATCCTCTCACATTTACGGGCTGTTTCAGCACATCTGTGTCGCATTTGAACTGGTTCTAGCTGATGGCAGCTTAGTACGCTGCACTGAGGAGGAGAACCCAGACCTGTTCCACGCCGTCCCGTGGTCCTGTGGAACGCTGGGGTTCCTGGTCGCAGCGGAGATTAAAATAATCCCCGCTAAACCCTGGGTGAAGCTGCACTATGAGCCGGTCAGAGGGCTGGAGAACATCTGTAAACGGTTCACTGAAGCATCGGAGGACAAACGGAACTCGTTTGTAGAGGGCCTCCAGTACAGTCGGGACACCGCCGTCATCATGACGGGAGCAATGACTGACCACGCCGAGCCGGAGAAGGTCAACAGAATCGGCCTGCACTTTAAACCATGGTTCTTTAAACACGTGGAGGGCTACCTGAAGGGCGACTACGCAGGAGTTGAATACATCCCTCTAAGACAGTACTACCatagacacacacgcagcatCTTCTGGGAGCTTCAGGATATTATTCCTTTCGGCAACAACCCAATATTTCGTTGGCTTTTTGGATGGATGGTTCCTCCGAAGATCTCACTGTTGAAGCTCACCCAGGGAGAGACCATCAGACGGCTTTATGAACAGCACCACGTGGTCCAGGACATGCTGGTACCCATGAAGAATCTGCAGGATGCCATCACGCGCTTCCACCAGGACATCGACGTCTACCCTCTGTGGCTGTGTCCATTCCTGTTGCCGCCAGGCAGAGGGATGGTCCACCCCAAAGGTCAAGAGGAGGAGTTGTATGTGGATATTGGGGCTTATGGAGAGCCCAAAGTCAAACACTTTGAAGCTAAAGCATCAACGCGTCAGCTGGAGAAGTTTGTTAGAGATGTGCATGGGTTCCAGATGCTGTATGCAGATGTGTACATGAACCGAGAGGAGTTTTGGGAGATGTTTGACGGACAGCTGTATCACAGACTGAGAGACAAACTAGGCTGTAAGGAGGCCTTCCCGGAGGTTTACGACAAAATCTGTAAATCTGCCCGACACTGAACCCCATCACTGGTACCTGACCTCCGCCCCGAGTCACAGATACACTCAGGCTCTGACTGCAAGTCATGTTTGCCGGCAGCTTCTGGTTTGGGGATgtttcaaaaacaacaaaaacaaaaactgttttATTCAAAGATGCTTTAAAGAATTCGAAAATAAGCTTTGCTCACACTACTAGCTGATGGCTAAGGTGTTTGTTCGTGGCAACTAAACTGTCTTAAGAGGCCCTTCTATCAATGTGAGGCAAGAGCACCAGTGTTGTTATACTTTTGAGTATGatgaatgtattttattttgcccTTTTCTGTACACCTACAGCTTGTTTCAACATGCATGTTCTGATTCAATGCTGCTTAACTCCCTATGTGTAACTTGTCCTTGTTGGGAGCATATTGCACCAAGtatttttcccttctttttcttttttttaaatgtgtatgttCGGCCTTATCATGACAGAACCTTTGCATTTCTCTGTACATCTTTTAATAACAGGTCAGCCTTACCGAGTGCCATAGACTTTGAAAACATGACTTCCTGATTAGCGTCCTAtccatattttaaaataaataggcTACTTTTGTGATATGAAGAAATCAAACAAACTATATTAAGTAAGCTACCTATTTTGATATCAAAATCACTTATCACCAGGACCGTGTGATttgaatgaattaataaaaatgtctttCCTGGAATAAATATCA

Function

symbol description
dhcr24 Predicted to enable delta24(24-1) sterol reductase activity. Predicted to be involved in steroid metabolic process. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and membrane. Is expressed in cranial ganglion; lens; solid lens vesicle; telencephalon; and yolk syncytial layer. Human ortholog(s) of this gene implicated in lipid metabolism disorder. Orthologous to human DHCR24 (24-dehydrocholesterol reductase).

NR:

description
delta(24)-sterol reductase

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0008762 UDP-N-acetylmuramate dehydrogenase activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function

KEGG:

id description
K09828 DHCR24, DWF1; Delta24-sterol reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810283.1 True 2433 mRNA 0.48 9 37782584 37791624

Neighbor

gene id symbol gene type direction distance location
usp24 usp24 coding upstream 32389 37699054 ~ 37750195 (+)
plpp3 plpp3,LOC103365633,LOC104959557 coding upstream 216683 37532503 ~ 37565901 (+)
LOC120565974 NA coding upstream 269670 37491661 ~ 37512914 (+)
dab1a dab1,LOC106952591 coding upstream 294446 37156476 ~ 37488138 (+)
oma1 oma1 coding upstream 640992 37127785 ~ 37141592 (+)
si:ch211-121a2.4 LOC100711177,LOC104919118,LOC102794329 coding downstream 1657 37793281 ~ 37796949 (+)
aqp12 LOC104962685,LOC103357409 coding downstream 22993 37814617 ~ 37816345 (+)
cep19 cep19,LOC102796355 coding downstream 44783 37836407 ~ 37838105 (+)
LOC120566156 plekhb2,LOC106613863 coding downstream 52102 37843726 ~ 37849600 (+)
LOC120566157 plekhb2 coding downstream 58449 37850073 ~ 37854359 (+)
G100926 NA non-coding upstream 15808 37766191 ~ 37766776 (+)
G100917 NA non-coding upstream 30446 37750861 ~ 37752138 (+)
G100906 NA non-coding upstream 123491 37658841 ~ 37659093 (+)
LOC120566005 NA non-coding upstream 207765 37569084 ~ 37574819 (+)
G100846 NA non-coding upstream 307507 37466174 ~ 37475077 (+)
LOC120565000 NA non-coding downstream 17644 37809268 ~ 37813410 (+)
G100938 NA non-coding downstream 22159 37813783 ~ 37814040 (+)
G100940 NA non-coding downstream 25749 37817373 ~ 37817757 (+)
G100956 NA non-coding downstream 47278 37838902 ~ 37839531 (+)
G100963 NA non-coding downstream 79832 37871456 ~ 37873735 (+)
G100843 NA other upstream 292512 37463914 ~ 37490072 (+)
prrc2c NA other upstream 824224 36932655 ~ 36958360 (+)
G100671 NA other upstream 1083715 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 1170838 36596041 ~ 36611746 (+)
smim24 NA other upstream 1248002 36495484 ~ 36534582 (+)
usp46 usp46 other downstream 1074811 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 1531960 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 1662496 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 1769437 39561061 ~ 39592762 (+)
LOC120565298 cdkl5,LOC103356958 other downstream 1902288 39693912 ~ 39740277 (+)

Expression


Co-expression Network