si:ch211-121a2.4 (LOC100711177,LOC104919118,LOC102794329)


Basic Information

Item Value
gene id si:ch211-121a2.4
gene name LOC100711177,LOC104919118,LOC102794329
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 37793281 ~ 37796949 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810284.1
CCTCCTCACAAGCGATAGAAAGCATTACTGGTCTTGCCTGACGGGGCTGTTTTGGAGACTACAGTGGGGTCCAGACTGGAGAAGAAAGAGGCTGAGCAGGAAGCATGTCCACTGACAATGAGCCCACGTTCACAGTcaagctgctgcagctgctgctgctctccacCTACTGGGGAATGCAGATTTGGGTCACTTTTATTTCAAGCTTTGTAATGGACAGCCACCTGAACAGACACACTTATGGTTTTATCCAGAGTCGCCTTGTCCCATTCTACCTCCACTTGGGTTCAGCTTGTGCCTTCTTCAACCTCACTATCTACGCTGTGTATCATCCCAGCGACAAGCTGAACGACAGAGAATCCTTtcagATCTTCATCTTCTTTGTGTCGGTGACAGTCGCGGCTGTCAACGCTCAGTGGTTTGGCCAAATGACATCAGAGATCATGGCGGACATGCACCTTATTGAGCAGGCGTGCGGATTGGGTCAGGACATCGGCCTTTCGTCGAACCGCGAAGCTTACGCCAAGCTGTCTGAGACGGACGTCAAATACAGACACCTCAGCGGTCGCCTGTGGCTGTACAGACTGCTGTCCTCCCTCTGTAACCTCTGCTGCTTAGGCTGCAACTTCTACAGCCTCTGTTACATCGCCGAGAACCTCGTCACACTTTGAACTGACGCATAGCAGCTGTACTCTTAAGTCTTTGAAAAATTGTCAGTCCAAATGACTAatctaaatgtatatttttgtacCAAACCTGTACGTCCTATATTTAATACATAGTTTTTTGTCTCTCTGCGGTGTTAGGTATTTGACACAAAGTCAGGTAAGCCTTGTTGTTCTCGTGCTTTGGGGATTAATGACAGGATACAACTGCCATGCTAAGATTTTGGCCCTCGATTTGTGTTGCTTTTGAAACAAACCGGGCCACTAAAGCTGCATTTCTCTCCTTAAGGTTGTAGGGAGACAAATCAATTTCTGCAATGAGTAATGCCTCACCTTTCACCTAGTGTGGCTGAGGCTTGGTGGCTGCCTTGATACTTTCCCTTCACTATTACAATTTAGTACCTTTCAGGAACCTAAAAGCATTACAACATTAGAGATGTTTTATAATTGCAGTACCAGAGAAATTCTGACAGAAAATAGCCACATTTTTTGCGTCTTTTTTATGTGtaagcaaaagaaaaacataaagatGTGCTCCCATGCTGCTCAGCCCTGCTCTTCCTGTTTGGGTGTAGTTTAAATACTTTGTTCACAGTGTGGTTTCACAGGCTTGTCTGGCTCACCTTTACGTTAACTTAAGTACACTGAAAGGTTGTACTATCTTTAGCTCTGCTGGCTGTTTTTGTCCTGTATGGTCTAGAATCAATTCTGCTTTTAGCCTTTTCAAACCACACTTGCACCAGTGGTTTGTTTATTGGTATATTGGAATTAGGATTAATTAATGTTCGTAAACAGTTCCAGTGTATTGCCCTGTAATTATGTAGATGCTATAAGATTGGTTGCACAGCAGGTTGGTCTAGTTGTGAGAAAGGATGGTATGGTAGAAAGTATTGTTTAGACTTGCTGAGGTGATGTGGGTCTATTACGACAATAGTACGGAGTCCCCAGAAAATCACAGTGGGAAAAACGTTTCTAAACTAATTTTGTGTTCCTGTGTATTAACTTTTGCGTTACTTCACAAGTAGtcacgcattgccagacctatctccacagcgcgagtatggtctggctgcaCGTGTTAACATTCTGGTATAGCTGGAAAAACGCTCTggattgtttgtatttctttaaaccaatcacaatcatgttGGGCGGTGCTGAGACCCAAATGCAGCCACGGTGCTTTTGCAAAATGGAAATACTGTAGATAGAAAATAGGGCTAAAGGGGAGGAGAATGCCTGGCACGCAGGATGTCAGGCTTTCACTAAGCATACCAGTATGACCATCTTTGTAACCTTACAGTGTGCCTCAACTGAAAATGACATCAGATCTACTATTTGAATTTCTCACATGCTTTGCTCTGTTCTCTACCACCTCCGTGTCAGTCATTATGTGTTCAAACTGCTGTGGGGAAAATGTATGCAGCCATGATTGGAAATGAAGCCAAATCATTTTTGAGTTGTACTCTCACTAGAGTTGTGTTCTGTGAAGTACTCTTCTCAGGTGTCTGATTCTTTTTTTAGTCATAGTATGTATatctttgcatttgttttgtctgCAGAGAGGATCTGTGGTGTGGTGAACAAACCTCTCCATGCTATGATGACCTCTCCTTTTTGACTTGTCCTAGTTCACCTAAGTAGCTGCTTAGGTGAAACTCTTCTATCAATATGTTTCTTCTTTCTCCTGTTCCTTTATTTTATGTTGGCCTGTGATACATGCCCATTAAACCAAAGTAAAAAATGCCATTAACATCAACTACCGTTACGTAATCAGGGCAAAGGCAGCCGAGTACTAATTCTGAAACTACTCTTATTTTTGTCCAGACCGAACTGATAAAGGTGACTCTTGTGTGCCCATAACTGGCAAATATATTGCACTATTACCTGGTTTTAAATTGCacgcattttcttttctttttttattgtgttgctTTTTAGCTTGGGCAGtttaaattaacaaaaaactTCAATGcaaataatttaaatgttttgttcatAAACAAATAAGCTGTACAGTTTAATTGTAGAAGACCACTTTACATTATTTGTGGATGTTTCTGTTTGTTAATGTTTGTGATAATgtgttataattataataaaaactgttaatgtgg

Function

NR:

description
transmembrane protein 205-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810284.1 True 2782 mRNA 0.42 3 37793281 37796949

Neighbor

gene id symbol gene type direction distance location
dhcr24 dhcr24,LOC102794897 coding upstream 1657 37782584 ~ 37791624 (+)
usp24 usp24 coding upstream 43086 37699054 ~ 37750195 (+)
plpp3 plpp3,LOC103365633,LOC104959557 coding upstream 227380 37532503 ~ 37565901 (+)
LOC120565974 NA coding upstream 280367 37491661 ~ 37512914 (+)
dab1a dab1,LOC106952591 coding upstream 305143 37156476 ~ 37488138 (+)
aqp12 LOC104962685,LOC103357409 coding downstream 17668 37814617 ~ 37816345 (+)
cep19 cep19,LOC102796355 coding downstream 39458 37836407 ~ 37838105 (+)
LOC120566156 plekhb2,LOC106613863 coding downstream 46777 37843726 ~ 37849600 (+)
LOC120566157 plekhb2 coding downstream 53124 37850073 ~ 37854359 (+)
cts12 LOC104962698,LOC103357414 coding downstream 86926 37883875 ~ 37889889 (+)
G100926 NA non-coding upstream 26505 37766191 ~ 37766776 (+)
G100917 NA non-coding upstream 41143 37750861 ~ 37752138 (+)
G100906 NA non-coding upstream 134188 37658841 ~ 37659093 (+)
LOC120566005 NA non-coding upstream 218462 37569084 ~ 37574819 (+)
G100846 NA non-coding upstream 318204 37466174 ~ 37475077 (+)
LOC120565000 NA non-coding downstream 12319 37809268 ~ 37813410 (+)
G100938 NA non-coding downstream 16834 37813783 ~ 37814040 (+)
G100940 NA non-coding downstream 20424 37817373 ~ 37817757 (+)
G100956 NA non-coding downstream 41953 37838902 ~ 37839531 (+)
G100963 NA non-coding downstream 74507 37871456 ~ 37873735 (+)
G100843 NA other upstream 303209 37463914 ~ 37490072 (+)
prrc2c NA other upstream 834921 36932655 ~ 36958360 (+)
G100671 NA other upstream 1094412 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 1181535 36596041 ~ 36611746 (+)
smim24 NA other upstream 1258699 36495484 ~ 36534582 (+)
usp46 usp46 other downstream 1069486 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 1526635 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 1657171 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 1764112 39561061 ~ 39592762 (+)
LOC120565298 cdkl5,LOC103356958 other downstream 1896963 39693912 ~ 39740277 (+)

Expression


Co-expression Network