LOC120565022


Basic Information

Item Value
gene id LOC120565022
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 11473356 ~ 11490038 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810317.1
GCGCCCCAAATTGCACACTGCAGTGTGAGGGGTACTTGTCTAAAACCGGACCGTTTTTAGCCAGTTTACCGTGAGTGTTGTGATTAATTTCCCGGCGTCGGGATGCAGAAACACCTGACGGAAAGCCAGAAGAAGTACTTCGTCAACATGGACGAGTACCTGTGCAGTCTGGGCCTCTACAGGAAGAGGGTGGCCCAGGACGCGTCCAGTCTGTTCCGAGCCGTGTCAGAAAAGttgtattACTCTCAGAACTACCATCAGAAGATCCGTCAGGACTGCGCCGACTACATGAAAGCCACCAGATGCAACTTTGAACCGTTTGTTGAAGGTTCATTTGAGAAATATCTGGAGCGTCTGGAGGACCCCAAGgagaCAGTGGGTCAGGTGGAGATCAAGGCTCTTTCTCAGCTCTACAGGCATTGTTTCCTGATCTATCGTTACCCGGGGGAACCAGCCATGGTGATCTCGGAGGGCGACTTTGTTGACAAGGTGACACTGTGTGCCTCCAACAATCACTATGACATCATATACCCGAGGAGTTACCTTGCCTCTGCCGCTCTCTGTCAGTctctTCTCTATGAGCTGCTCTATACTAAGGTGTTTGGGTTTGAGGAGGCGGAGCTCAGTGACGCCATGGAGGCCTTCAGGATCGGAGGTCGTTGCTATAGAAACAGACCATCCGCGTGTAGGGATGTCGACTTTGGCTGCGACACACCTGAGGACCGATGTCACAGGGAGGAGTCGAAGTCGGGTGGAGCGGCAGAGGAGAAACTCCAAGCTGTGACAGACGACTCAAAGCCTCCTGAAGAAGTCCCGCCCCCCTCCAGACTGTCTCTTCCTTATAAGGTCATGAAGTCTCTGGACGGAAAACGTTACAGAAACCTTGAGTTTGATGTCTGGCTGGACACCTGCAAAGAGATGCAGAAGACCAACTACATGGTGTTTGAAGGGAGGCAGTACTTCCTGGGAGACAAGTGTCAGgtGCGTCTAGAGCCGCAGGGGAAGTACTTCAATGCCTTCATCCAGGAAGTAGGAACACAGCCATCAGCCGTCACCGTCTTCATCGAGGAGCTGGCAGAGAAaCACCTGGTTCCTCTGACTAATCTAATACTAGTGAACCCATTTCCTGCCTGGAACGTTGCTGATCCCACCAGAAAAGGAGACCTGGACTCGGACTCTCGTGGTCAGCGACGTCACCGCCATCGGTACTACAGGAAGTCTTGCGGAGTGAAAGGGGCGAAGCTGCTGATGCCGCCACCATTCTACTATGGAGGCCCAGATCCCTTCGCCCTGCCCCCCCCCTTCCAGACCGGCCCGCCCGCTCCTCTGTCACCAGGAGCCATGACCTACGACCCCTACGCCCCCCTACACCATCACTACCACCCAACCAGACCTCCTCGCAACGGAGCCTCCAGAAGGTCCACGCGCTTTCTGAGCCGCCACCTAATTGGTCCAGAGTTGACCTATTACCACCCTGGCAGACGATATTACCACAACAACGAGAACTACGCCTTCAGtcGTAGTCGGCGTCTGCTGCTGAATAAAGAGTGTCAGTTTGGTTTCCCCGCGGAGACAGTGGAGGAGCCGACTTATCAGGATGCAACCATGGCATACTACCAGCTGGACGAGACCAGTGACGCCGTCTTCCCTCCAGTGCCAATGAGAAGACCAAAACTACAAGAACCAGATGATACAGACCCGGTTGTGGAACCGCCTCCCTCCATGGGAGGAAACACCCCCCTCTGCTCGTCAGAGGAGGACCAGGCTGAGTACACAGACGAGTACATCTACTTTACTCAGGATCAGAGATACCAGCCCTCAGGTGTTTACACTGCTGCTGAGCCCTCCACAGATCAGgtagAGAAGCCATTAGCGGCCACCTGCTCTTcaccctcctcatcctcctcctccccatcTTCTGAGTTGGGTGAGCCTCACTGCACCGTGGAAGCTCCGCCCCCTTACTCGAACGCCCCTAACGGCAGTGATTTACCccaagactGCAGAGTCCTCCAGTATTACTTCAACTTAGGAGTCCAGTGGtaccatcagcagcagcagcagcagcagcagcagcacgtgTACCATGCCACCTCACAGGAGGCACCCTACCCCTACCAGCACTACACCCCCTACCTGAGCCAGGAACCGCCCCTGCATGCTGCCCCTCCTTCGTACTCTGAGACAACTCAAGGGCCCAATCAGCCACCCTCCTCTTACCCAGAATCCACCAAGGCAGaagatggacacacacatggacacagcaGTGgccccgccccctcctgtgaagcctcctcctccaccatcAGCCCTGCCCCTCCAGACTCCACCCCCTCCTCTGCTTTCCCGTACCCATatcaaacaccccccccaccaccctcgCTGCTGCACCTGCCATATAAACCTCCGCCCACGGCCACCTATCTTCCAACTGCCCTTCCTCCTCTGGCTTTGTCTGCTCATCCTGACCCCGCCTACCTCACCCATCACTCCTCTTACCACGCCTACCTCTCCCGCTCCACCCACTGGGGGGCCTTACAGACCAGAGGCCACGCCACGCAGGTCTACTGCCCTGCCCCTAACCCCTCCCACTGGGGGGCGCTACAGACCAGAGGCTATGCCACACAAGTCTACTGCCCTCCCCCTAACCCCTCCCACGTTGTCGGTTACATCAGAGCCCCGACATCCCACCACATGGCCACACACTACATTCCTCCCAGCATCTAACACACGCAACATACCTCACTCATTAGCTAAAGGCTAACAACACCCTTTGTGTTCAATAAGCAGTGCTAAGAAGTCCCCCAAACAATTTCCTGCTAATGTGGAACCTTAACAAAAT
>XM_039810318.1
GCGCCCCAAATTGCACACTGCAGTGTGAGGGGTACTTGTCTAAAACCGGACCGTTTTTAGCCAGTTTACCGTGAGTGTTGTGATTAATTTCCCGGCGTCGGGATGCAGAAACACCTGACGGAAAGCCAGAAGAAGTACTTCGTCAACATGGACGAGTACCTGTGCAGTCTGGGCCTCTACAGGAAGAGGGTGGCCCAGGACGCGTCCAGTCTGTTCCGAGCCGTGTCAGAAAAGttgtattACTCTCAGAACTACCATCAGAAGATCCGTCAGGACTGCGCCGACTACATGAAAGCCACCAGATGCAACTTTGAACCGTTTGTTGAAGGTTCATTTGAGAAATATCTGGAGCGTCTGGAGGACCCCAAGgagaCAGTGGGTCAGGTGGAGATCAAGGCTCTTTCTCAGCTCTACAGGCATTGTTTCCTGATCTATCGTTACCCGGGGGAACCAGCCATGGTGATCTCGGAGGGCGACTTTGTTGACAAGGTGACACTGTGTGCCTCCAACAATCACTATGACATCATATACCCGAGGAGTTACCTTGCCTCTGCCGCTCTCTGTCAGTctctTCTCTATGAGCTGCTCTATACTAAGGTGTTTGGGTTTGAGGAGGCGGAGCTCAGTGACGCCATGGAGGCCTTCAGGATCGGAGGTCGTTGCTATAGAAACAGACCATCCGCGTGTAGGGATGTCGACTTTGGCTGCGACACACCTGAGGACCGATGTCACAGGGAGGAGTCGAAGTCGGGTGGAGCGGCAGAGGAGAAACTCCAAGCTGTGACAGACGACTCAAAGCCTCCTGAAGAAGTCCCGCCCCCCTCCAGACTGTCTCTTCCTTATAAGGTCATGAAGTCTCTGGACGGAAAACGTTACAGAAACCTTGAGTTTGATGTCTGGCTGGACACCTGCAAAGAGATGCAGAAGACCAACTACATGGTGTTTGAAGGGAGGCAGTACTTCCTGGGAGACAAGTGTCAGgtGCGTCTAGAGCCGCAGGGGAAGTACTTCAATGCCTTCATCCAGGAAGTAGGAACACAGCCATCAGCCGTCACCGTCTTCATCGAGGAGCTGGCAGAGAAaCACCTGGTTCCTCTGACTAATCTAATACTAGTGAACCCATTTCCTGCCTGGAACGTTGCTGATCCCACCAGAAAAGGAGACCTGGACTCGGACTCTCGTGGTCAGCGACGTCACCGCCATCGGTACTACAGGAAGTCTTGCGGAGTGAAAGGGGCGAAGCTGCTGATGCCGCCACCATTCTACTATGGAGGCCCAGATCCCTTCGCCCTGCCCCCCCCCTTCCAGACCGGCCCGCCCGCTCCTCTGTCACCAGGAGCCATGACCTACGACCCCTACGCCCCCCTACACCATCACTACCACCCAACCAGACCTCCTCGCAACGGAGCCTCCAGGTCCACGCGCTTTCTGAGCCGCCACCTAATTGGTCCAGAGTTGACCTATTACCACCCTGGCAGACGATATTACCACAACAACGAGAACTACGCCTTCAGtcGTAGTCGGCGTCTGCTGCTGAATAAAGAGTGTCAGTTTGGTTTCCCCGCGGAGACAGTGGAGGAGCCGACTTATCAGGATGCAACCATGGCATACTACCAGCTGGACGAGACCAGTGACGCCGTCTTCCCTCCAGTGCCAATGAGAAGACCAAAACTACAAGAACCAGATGATACAGACCCGGTTGTGGAACCGCCTCCCTCCATGGGAGGAAACACCCCCCTCTGCTCGTCAGAGGAGGACCAGGCTGAGTACACAGACGAGTACATCTACTTTACTCAGGATCAGAGATACCAGCCCTCAGGTGTTTACACTGCTGCTGAGCCCTCCACAGATCAGgtagAGAAGCCATTAGCGGCCACCTGCTCTTcaccctcctcatcctcctcctccccatcTTCTGAGTTGGGTGAGCCTCACTGCACCGTGGAAGCTCCGCCCCCTTACTCGAACGCCCCTAACGGCAGTGATTTACCccaagactGCAGAGTCCTCCAGTATTACTTCAACTTAGGAGTCCAGTGGtaccatcagcagcagcagcagcagcagcagcagcacgtgTACCATGCCACCTCACAGGAGGCACCCTACCCCTACCAGCACTACACCCCCTACCTGAGCCAGGAACCGCCCCTGCATGCTGCCCCTCCTTCGTACTCTGAGACAACTCAAGGGCCCAATCAGCCACCCTCCTCTTACCCAGAATCCACCAAGGCAGaagatggacacacacatggacacagcaGTGgccccgccccctcctgtgaagcctcctcctccaccatcAGCCCTGCCCCTCCAGACTCCACCCCCTCCTCTGCTTTCCCGTACCCATatcaaacaccccccccaccaccctcgCTGCTGCACCTGCCATATAAACCTCCGCCCACGGCCACCTATCTTCCAACTGCCCTTCCTCCTCTGGCTTTGTCTGCTCATCCTGACCCCGCCTACCTCACCCATCACTCCTCTTACCACGCCTACCTCTCCCGCTCCACCCACTGGGGGGCCTTACAGACCAGAGGCCACGCCACGCAGGTCTACTGCCCTGCCCCTAACCCCTCCCACTGGGGGGCGCTACAGACCAGAGGCTATGCCACACAAGTCTACTGCCCTCCCCCTAACCCCTCCCACGTTGTCGGTTACATCAGAGCCCCGACATCCCACCACATGGCCACACACTACATTCCTCCCAGCATCTAACACACGCAACATACCTCACTCATTAGCTAAAGGCTAACAACACCCTTTGTGTTCAATAAGCAGTGCTAAGAAGTCCCCCAAACAATTTCCTGCTAATGTGGAACCTTAACAAAAT
>XM_039810319.1
GAAGAGGTCAGGGCCGGTGAGAGGAGAGGTCAACCATATTAGATTTGATTAGGATCACAAAAGCAGATTACTCAATTGTTACCAGTATTATGTTCCTCTGATGAACATGATAGCCTACTGGCAACAATTGAACTTGAACCTCCTCATTAAGTTTTTTTGCAGAAAGGTTAAGATGTCTATAGGCGCTATGGTTGGGTCATTTTAAACTAGAATGGAGTTTGGAAAAGCAGTTGCCACGACTTAAAAttgtattACTCTCAGAACTACCATCAGAAGATCCGTCAGGACTGCGCCGACTACATGAAAGCCACCAGATGCAACTTTGAACCGTTTGTTGAAGGTTCATTTGAGAAATATCTGGAGCGTCTGGAGGACCCCAAGgagaCAGTGGGTCAGGTGGAGATCAAGGCTCTTTCTCAGCTCTACAGGCATTGTTTCCTGATCTATCGTTACCCGGGGGAACCAGCCATGGTGATCTCGGAGGGCGACTTTGTTGACAAGGTGACACTGTGTGCCTCCAACAATCACTATGACATCATATACCCGAGGAGTTACCTTGCCTCTGCCGCTCTCTGTCAGTctctTCTCTATGAGCTGCTCTATACTAAGGTGTTTGGGTTTGAGGAGGCGGAGCTCAGTGACGCCATGGAGGCCTTCAGGATCGGAGGTCGTTGCTATAGAAACAGACCATCCGCGTGTAGGGATGTCGACTTTGGCTGCGACACACCTGAGGACCGATGTCACAGGGAGGAGTCGAAGTCGGGTGGAGCGGCAGAGGAGAAACTCCAAGCTGTGACAGACGACTCAAAGCCTCCTGAAGAAGTCCCGCCCCCCTCCAGACTGTCTCTTCCTTATAAGGTCATGAAGTCTCTGGACGGAAAACGTTACAGAAACCTTGAGTTTGATGTCTGGCTGGACACCTGCAAAGAGATGCAGAAGACCAACTACATGGTGTTTGAAGGGAGGCAGTACTTCCTGGGAGACAAGTGTCAGgtGCGTCTAGAGCCGCAGGGGAAGTACTTCAATGCCTTCATCCAGGAAGTAGGAACACAGCCATCAGCCGTCACCGTCTTCATCGAGGAGCTGGCAGAGAAaCACCTGGTTCCTCTGACTAATCTAATACTAGTGAACCCATTTCCTGCCTGGAACGTTGCTGATCCCACCAGAAAAGGAGACCTGGACTCGGACTCTCGTGGTCAGCGACGTCACCGCCATCGGTACTACAGGAAGTCTTGCGGAGTGAAAGGGGCGAAGCTGCTGATGCCGCCACCATTCTACTATGGAGGCCCAGATCCCTTCGCCCTGCCCCCCCCCTTCCAGACCGGCCCGCCCGCTCCTCTGTCACCAGGAGCCATGACCTACGACCCCTACGCCCCCCTACACCATCACTACCACCCAACCAGACCTCCTCGCAACGGAGCCTCCAGAAGGTCCACGCGCTTTCTGAGCCGCCACCTAATTGGTCCAGAGTTGACCTATTACCACCCTGGCAGACGATATTACCACAACAACGAGAACTACGCCTTCAGtcGTAGTCGGCGTCTGCTGCTGAATAAAGAGTGTCAGTTTGGTTTCCCCGCGGAGACAGTGGAGGAGCCGACTTATCAGGATGCAACCATGGCATACTACCAGCTGGACGAGACCAGTGACGCCGTCTTCCCTCCAGTGCCAATGAGAAGACCAAAACTACAAGAACCAGATGATACAGACCCGGTTGTGGAACCGCCTCCCTCCATGGGAGGAAACACCCCCCTCTGCTCGTCAGAGGAGGACCAGGCTGAGTACACAGACGAGTACATCTACTTTACTCAGGATCAGAGATACCAGCCCTCAGGTGTTTACACTGCTGCTGAGCCCTCCACAGATCAGgtagAGAAGCCATTAGCGGCCACCTGCTCTTcaccctcctcatcctcctcctccccatcTTCTGAGTTGGGTGAGCCTCACTGCACCGTGGAAGCTCCGCCCCCTTACTCGAACGCCCCTAACGGCAGTGATTTACCccaagactGCAGAGTCCTCCAGTATTACTTCAACTTAGGAGTCCAGTGGtaccatcagcagcagcagcagcagcagcagcagcacgtgTACCATGCCACCTCACAGGAGGCACCCTACCCCTACCAGCACTACACCCCCTACCTGAGCCAGGAACCGCCCCTGCATGCTGCCCCTCCTTCGTACTCTGAGACAACTCAAGGGCCCAATCAGCCACCCTCCTCTTACCCAGAATCCACCAAGGCAGaagatggacacacacatggacacagcaGTGgccccgccccctcctgtgaagcctcctcctccaccatcAGCCCTGCCCCTCCAGACTCCACCCCCTCCTCTGCTTTCCCGTACCCATatcaaacaccccccccaccaccctcgCTGCTGCACCTGCCATATAAACCTCCGCCCACGGCCACCTATCTTCCAACTGCCCTTCCTCCTCTGGCTTTGTCTGCTCATCCTGACCCCGCCTACCTCACCCATCACTCCTCTTACCACGCCTACCTCTCCCGCTCCACCCACTGGGGGGCCTTACAGACCAGAGGCCACGCCACGCAGGTCTACTGCCCTGCCCCTAACCCCTCCCACTGGGGGGCGCTACAGACCAGAGGCTATGCCACACAAGTCTACTGCCCTCCCCCTAACCCCTCCCACGTTGTCGGTTACATCAGAGCCCCGACATCCCACCACATGGCCACACACTACATTCCTCCCAGCATCTAACACACGCAACATACCTCACTCATTAGCTAAAGGCTAACAACACCCTTTGTGTTCAATAAGCAGTGCTAAGAAGTCCCCCAAACAATTTCCTGCTAATGTGGAACCTTAACAAAAT

Function

GO: NA

KEGG:

id description
K07432 ALG13; beta-1,4-N-acetylglucosaminyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810317.1 False 2842 mRNA 0.56 23 11473356 11490038
XM_039810318.1 False 2839 mRNA 0.56 23 11473356 11490038
XM_039810319.1 True 2854 mRNA 0.54 23 11473924 11490038

Neighbor

gene id symbol gene type direction distance location
LOC120566075 LOC101470345,LOC102300495,LOC102205443,LOC103370586 coding upstream 116485 11311738 ~ 11356871 (+)
LOC120565497 LOC103370597 coding upstream 169263 11248434 ~ 11304093 (+)
trnam-cau_8 NA coding upstream 224709 11248575 ~ 11248647 (+)
ccdc17 NA coding upstream 235455 11222522 ~ 11237901 (+)
LOC120565506 NA coding upstream 366158 11105141 ~ 11107198 (+)
si:ch211-262h13.5 NA coding downstream 24920 11514958 ~ 11523948 (+)
LOC120566036 LOC104946463 coding downstream 35432 11525470 ~ 11549098 (+)
dnai3 wdr63 coding downstream 66319 11556357 ~ 11576634 (+)
LOC120565976 col24a1 coding downstream 194324 11684362 ~ 11786933 (+)
ddah1 ddah1 coding downstream 344517 11834555 ~ 11916573 (+)
G94706 NA non-coding upstream 233119 11238444 ~ 11240237 (+)
G94691 NA non-coding upstream 278426 11194647 ~ 11194930 (+)
G94690 NA non-coding upstream 297139 11176004 ~ 11176217 (+)
G94688 LOC104952604 non-coding upstream 346336 11126756 ~ 11127020 (+)
G94687 lrrc7,LOC103129487 non-coding upstream 351672 11121469 ~ 11121684 (+)
G94747 NA non-coding downstream 86750 11576788 ~ 11577261 (+)
G94779 clg17h1orf52,LOC104926352,LOC103370521,LOC101473273,LOC102790030,LOC102310746 non-coding downstream 161484 11651522 ~ 11659072 (+)
G94813 NA non-coding downstream 426593 11916631 ~ 11920037 (+)
G94997 NA non-coding downstream 1375874 12865912 ~ 12866251 (+)
G95002 NA non-coding downstream 1505197 12995235 ~ 12995654 (+)
LOC120565923 LOC103370579,LOC100695501,LOC102794561,LOC101470646,LOC102226407,LOC102291616 other upstream 15210 11359690 ~ 11458146 (+)
si:ch211-162e15.3 LOC103376230,LOC100712485,LOC108238459,LOC102795316,LOC102207055 other upstream 525040 10946932 ~ 10948316 (+)
G94598 NA other upstream 532112 10916925 ~ 10941244 (+)
atp11b atp11b other upstream 1058530 10363462 ~ 10414826 (+)
LOC120565490 NA other upstream 1313475 9985719 ~ 10159881 (+)
znhit6 znhit6,LOC102790327 other downstream 299097 11789135 ~ 11821882 (+)
lrp8 LOC103355569 other downstream 671600 12161638 ~ 12443080 (+)
ror1 ror1 other downstream 1252767 12742805 ~ 12865842 (+)
raver2 raver2 other downstream 1515530 13005568 ~ 13100445 (+)
G95046 NA other downstream 1682987 13173025 ~ 13220372 (+)

Expression


Co-expression Network