LOC120565044 (LOC104959247,LOC103354158,LOC101062866)


Basic Information

Item Value
gene id LOC120565044
gene name LOC104959247,LOC103354158,LOC101062866
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 36922493 ~ 36931245 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810357.1
TTTAGGGTAGGGTACTGATAAATGTGCACAATCCGCTCCCTCTCACTGTCTCACTCCGCCCACTGTTCAGTTACTGCTCAGTTCCATGCAGCACGAAAACCTCGCCTCGTTCCTCGATTCCTAAAAGACTGATCTGGTTCATCGTCACAGAGCTGAAGTATGACCCGTCGCGTGGCAGTGATTGGAGGAGGAAGTTCAGGTCTGGCCTGTATCAAGTGCTGTCTGGACGAGGGGCTGGAGCCTGTCTGCTACGAAAGCAGCGATGACATTGGTGGTCTGTGGAGGTTTAAGGAGAATCCGGAGGCTGACAGGGCCAGCATCTACCACTCTGTCATCATCAACACCTCCAAGGAGATGATGTGTTTCAGTGACTTCCCCATCCCTGCACACTTCCCCAACTACATGCATAACTCCCTCATCATGGACTACTTTCGAATGTATGCCGACCACTTCCAGCTCACCAAGCATATTCGCTTTAATACCAAAGTCTTGCAGGTGAAGCAGAGATCCGATTTTTCTAAATCGGGCCAGTGGGATGTTGAGACAGAGAACAAGGATGGCAAAAAGGAGAAACATATTTTTGATGCTGTGATGATCTGTATTGGACATCACTGCCACCCCAACATGCCTCTGCATGACTTCCCAGgaattGAGACTTTCAAGGGAAAGTACTTCCACAGCAGAGACTACAAGACTCCTGAGGAGTGGAGGAATAAAAAGGTTGTAGTGATTGGAATAGGAAACTCTGGAGGAGACATAGCAGTGGAACTGAGCAGAGTCACCAAGCAGGTTTTCCTGAGCACGCGAAGAGGAGCTTGGGTTTTGAACCGAGTTGGGGACAACGGGCTGCCCTTAGATTTGCACTTTAACAGGATGATAAATACTCTGCGGAGCATCCTTCCGTTTGGTGTTGTCTGTGGTCTAGGAGAGAGAATGCTCAACCAAAGATTTGATCACACTCTCTACAATCTTAAGCCAAAGCACAGGTTGTTCAGCCAACATCCCACAGTGAATGATGAGCTGCCAAACCGCATCCTTTCTGGAACAGTTCAAGTGAAACCCAACATCCGCCGGTTTCAGGGCTCCAGTTTGGAGTTTGATGATGGAAGTGTTGTGGAAGATGTCGACCTGGTGGTGTTTGCCACAGGTTACAGGTTTTCCTTTCCATTCCTGGCCTCACAtgtgctctcagtgtctgagaACAAAACATCTCTATACAAGTATGTGTTTCCACCTGAGTTGGACCGCCACACTCTGGCTATCATTGGTCTAGTGCAGCCACTGGGAGCTATTATGCCCATCTCTGAGATGCAGGCCAGATTGGCCACACGTGTCTTTAAAGGCTGTATCAAGCTTCCCTCAGTGGCTTCCATGCTAAAAGATGCCCAGTGCAAGCAGGAGGAAATGGCTAAACGGTATGTCACCAGTCAGAGACACACCATCCAGGTCGACTATATCAACTACATGGATGAGCTAGCAGAGCTAGTGGGGGTTCGACCCAGAATCCCCAGGCTGCTGCTGACTGATCCCATGCTGGGACTAAAAGTGATGCTCGGCCCCTGCACGCCTTACCAGTATCGTCTCAGAGGGCCAGGGAAATGGGCTGGAGCCCGTCAGGCCATCTTTACTCAGTGGGAGAGAGTGGTTGAACCCATGCAGACCAGGCCCTGTGATGAGCCCAAACCCAAGAGATCGTTTATGTGGCCTCTGATTCtgtcagctgctgctgcgggCTTGGCTGCCTATGTTAACAGGAACAACCTTCCAGCTTTCCTTCAAGATCCCACTGCACTGTTGGACAAGATAAAAGTGCACCTGCCTGCACAGTGATGTGCAATTAATATTTAATTCATATCTGATGTGATTATGACTGTATAATACATACTGACTTTCTGGTAGGATTAATAAACTGCATAGATAgcataaatcaataaaaaaaaaatttaaatagatATAAatgccaaaagtaaaagtacacagcTCATTACTGGTTAAATTGCATAAGCAAGCAGCAGCATGTCAACGGTCCAGCTGGTCCATGTGGTCTGCTATTCTGTATAATGTTTGGTAATTTAAACCGAAGCGATGCATTATATTTCATAAGTGTATATGTAAAATCTGTATCTGAAAAGATGTAGTGACTACAGCTGTGATATCAAATATACAACATGTCCCTAATTTCAGTGTAACACCAGACAAAAGGTAAATATTTAAGTATAAGTAGCCAATGTCAAAATTGTACTCAAACACAGTACTTCAGCAAATGTACATTATCTCCAGGCTGAACCTTAAAATAAGATAATGCCTACATTGGTCAATAGCCCACCTAATGGCAGCTTCAGAACCCAGCGGAGGTTGGGCTCGAGAAAACTATATGAAGCGATGTATTGTAGTCCTTTGTGTCTCACTGTGTCATACTGGGATCATGTGATTAAAGATCTCCCTCTGGTTGGTTTTCTTTCTAAAGATGACATGGTAAAATTGTGTGGTAGGGGCCTAAAATCAATACTCAAGacatgaaattaaaaataaacaataacaatgaatatGGA
>XM_039810358.1
AGGGTAGGGTACTGATAAATGTGCACAATCCGCTCCCTCTCACTGTCTCACTCCGCCCACTGTTCAGTTACTGCTCAGTTCCATGCAGCACGAAAACCTCGCCTCGTTCCTCGATTCCTAAAAGAGCTGAAGTATGACCCGTCGCGTGGCAGTGATTGGAGGAGGAAGTTCAGGTCTGGCCTGTATCAAGTGCTGTCTGGACGAGGGGCTGGAGCCTGTCTGCTACGAAAGCAGCGATGACATTGGTGGTCTGTGGAGGTTTAAGGAGAATCCGGAGGCTGACAGGGCCAGCATCTACCACTCTGTCATCATCAACACCTCCAAGGAGATGATGTGTTTCAGTGACTTCCCCATCCCTGCACACTTCCCCAACTACATGCATAACTCCCTCATCATGGACTACTTTCGAATGTATGCCGACCACTTCCAGCTCACCAAGCATATTCGCTTTAATACCAAAGTCTTGCAGGTGAAGCAGAGATCCGATTTTTCTAAATCGGGCCAGTGGGATGTTGAGACAGAGAACAAGGATGGCAAAAAGGAGAAACATATTTTTGATGCTGTGATGATCTGTATTGGACATCACTGCCACCCCAACATGCCTCTGCATGACTTCCCAGgaattGAGACTTTCAAGGGAAAGTACTTCCACAGCAGAGACTACAAGACTCCTGAGGAGTGGAGGAATAAAAAGGTTGTAGTGATTGGAATAGGAAACTCTGGAGGAGACATAGCAGTGGAACTGAGCAGAGTCACCAAGCAGGTTTTCCTGAGCACGCGAAGAGGAGCTTGGGTTTTGAACCGAGTTGGGGACAACGGGCTGCCCTTAGATTTGCACTTTAACAGGATGATAAATACTCTGCGGAGCATCCTTCCGTTTGGTGTTGTCTGTGGTCTAGGAGAGAGAATGCTCAACCAAAGATTTGATCACACTCTCTACAATCTTAAGCCAAAGCACAGGTTGTTCAGCCAACATCCCACAGTGAATGATGAGCTGCCAAACCGCATCCTTTCTGGAACAGTTCAAGTGAAACCCAACATCCGCCGGTTTCAGGGCTCCAGTTTGGAGTTTGATGATGGAAGTGTTGTGGAAGATGTCGACCTGGTGGTGTTTGCCACAGGTTACAGGTTTTCCTTTCCATTCCTGGCCTCACAtgtgctctcagtgtctgagaACAAAACATCTCTATACAAGTATGTGTTTCCACCTGAGTTGGACCGCCACACTCTGGCTATCATTGGTCTAGTGCAGCCACTGGGAGCTATTATGCCCATCTCTGAGATGCAGGCCAGATTGGCCACACGTGTCTTTAAAGGCTGTATCAAGCTTCCCTCAGTGGCTTCCATGCTAAAAGATGCCCAGTGCAAGCAGGAGGAAATGGCTAAACGGTATGTCACCAGTCAGAGACACACCATCCAGGTCGACTATATCAACTACATGGATGAGCTAGCAGAGCTAGTGGGGGTTCGACCCAGAATCCCCAGGCTGCTGCTGACTGATCCCATGCTGGGACTAAAAGTGATGCTCGGCCCCTGCACGCCTTACCAGTATCGTCTCAGAGGGCCAGGGAAATGGGCTGGAGCCCGTCAGGCCATCTTTACTCAGTGGGAGAGAGTGGTTGAACCCATGCAGACCAGGCCCTGTGATGAGCCCAAACCCAAGAGATCGTTTATGTGGCCTCTGATTCtgtcagctgctgctgcgggCTTGGCTGCCTATGTTAACAGGAACAACCTTCCAGCTTTCCTTCAAGATCCCACTGCACTGTTGGACAAGATAAAAGTGCACCTGCCTGCACAGTGATGTGCAATTAATATTTAATTCATATCTGATGTGATTATGACTGTATAATACATACTGACTTTCTGGTAGGATTAATAAACTGCATAGATAgcataaatcaataaaaaaaaaatttaaatagatATAAatgccaaaagtaaaagtacacagcTCATTACTGGTTAAATTGCATAAGCAAGCAGCAGCATGTCAACGGTCCAGCTGGTCCATGTGGTCTGCTATTCTGTATAATGTTTGGTAATTTAAACCGAAGCGATGCATTATATTTCATAAGTGTATATGTAAAATCTGTATCTGAAAAGATGTAGTGACTACAGCTGTGATATCAAATATACAACATGTCCCTAATTTCAGTGTAACACCAGACAAAAGGTAAATATTTAAGTATAAGTAGCCAATGTCAAAATTGTACTCAAACACAGTACTTCAGCAAATGTACATTATCTCCAGGCTGAACCTTAAAATAAGATAATGCCTACATTGGTCAATAGCCCACCTAATGGCAGCTTCAGAACCCAGCGGAGGTTGGGCTCGAGAAAACTATATGAAGCGATGTATTGTAGTCCTTTGTGTCTCACTGTGTCATACTGGGATCATGTGATTAAAGATCTCCCTCTGGTTGGTTTTCTTTCTAAAGATGACATGGTAAAATTGTGTGGTAGGGGCCTAAAATCAATACTCAAGacatgaaattaaaaataaacaataacaatgaatatGGA

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: dimethylaniline monooxygenase [N-oxide-forming] 5-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0004499 N,N-dimethylaniline monooxygenase activity molecular_function
GO:0050660 flavin adenine dinucleotide binding molecular_function
GO:0050661 NADP binding molecular_function

KEGG:

id description
K00485 FMO; dimethylaniline monooxygenase (N-oxide forming)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810357.1 True 2552 mRNA 0.46 10 36922493 36931245
XM_039810358.1 False 2526 mRNA 0.46 10 36922496 36931245

Neighbor

gene id symbol gene type direction distance location
LOC120566029 LOC104964070,LOC103354160 coding upstream 5350 36889418 ~ 36917143 (+)
plpp6 plpp6,LOC103354162,LOC102785296 coding upstream 40100 36875647 ~ 36882393 (+)
lonp1 lonp1 coding upstream 180497 36725189 ~ 36741996 (+)
rsph4a LOC104961853 coding upstream 201594 36713375 ~ 36720899 (+)
dohh dohh,LOC102789931 coding upstream 210240 36704452 ~ 36712253 (+)
rangrf rangrf,LOC102787952 coding downstream 54613 36985858 ~ 36986961 (+)
mettl13 mettl13,LOC102788519 coding downstream 61898 36993143 ~ 37005146 (+)
dnm3a dnm3 coding downstream 74196 37005441 ~ 37029588 (+)
suco suco coding downstream 116032 37047277 ~ 37107092 (+)
mysm1 mysm1,LOC106613979 coding downstream 177328 37108573 ~ 37114224 (+)
G100714 LOC104926011,LOC100703953 non-coding upstream 53499 36863980 ~ 36868994 (+)
G100699 NA non-coding upstream 167668 36754580 ~ 36754825 (+)
G100668 NA non-coding upstream 243663 36678498 ~ 36678830 (+)
G100667 LOC102192127,LOC101475420,LOC102307792 non-coding upstream 244565 36674449 ~ 36677928 (+)
LOC120565379 NA non-coding upstream 270603 36642906 ~ 36651890 (+)
G100727 NA non-coding downstream 3922 36935167 ~ 36974049 (+)
G100726 myoc non-coding downstream 37442 36968687 ~ 36978162 (+)
G100738 LOC103354147,LOC103137061,LOC106938442 non-coding downstream 108003 37039248 ~ 37043566 (+)
G100747 NA non-coding downstream 115656 37046901 ~ 37047118 (+)
G100749 NA non-coding downstream 169542 37100787 ~ 37102889 (+)
G100671 NA other upstream 223624 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 310747 36596041 ~ 36611746 (+)
smim24 NA other upstream 387911 36495484 ~ 36534582 (+)
G100568 lmnb2 other upstream 447298 36473538 ~ 36475195 (+)
dsg2.1 NA other upstream 687894 36215464 ~ 36234599 (+)
prrc2c NA other downstream 1410 36932655 ~ 36958360 (+)
G100843 NA other downstream 532669 37463914 ~ 37490072 (+)
usp46 usp46 other downstream 1935190 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 2392339 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 2522875 39454120 ~ 39464450 (+)

Expression


Co-expression Network