si:dkey-110c1.10 (LOC100701936,LOC102208033,LOC101482435,LOC102800276)


Basic Information

Item Value
gene id si:dkey-110c1.10
gene name LOC100701936,LOC102208033,LOC101482435,LOC102800276
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 26350599 ~ 26379944 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810466.1
TCCAATCACTGCATCCTCTCACAGATTAACAGTTAACTTGTCTTTGTGAGCCTGGACAAAGTGCAAAATACTGTCACCAGGACACAAAGTGGCTGTTCTGCAGAGTTGTGGAGGATACAGACTTTTCAGAGGGACGTGCTGATGTTACCCCTGttgattgttttttaaatgatgtcTATCTGCATGCTTTAAAGTAGTCAAGATGACATCACTGGAGCTATACAGCAAGGGAGCATGTGTGTGGGTTCCTGACCCAGATGCAGTTTGGGTGTCAGCCCTGCTCCTCCAGGACTACAGTCCTGGAGAGAAACATCTACTGCTACAGCTCTCTAATGGAAAGGAGACCCATTATCCAGTGGCGTCCCATTCTGATCTCCCACCTCTGGGGAACCCCGACATCCTGGAGGGGGAAAATGACCTGACAGCTCTCAGCTTCCTCCATGAACCTGCTGTCTTGCACAACCTGCGGGTTCGATTCCTGGACTACAGCAGCATCTATACGTACTGTGGTATTGTGTTAGTGGCCATCAATCCCTATGACCAGCTCCCCATATATGGAGAGGAGGTGATCGATGCTTACAGCGGCCAGGACATGGCCGACATGGAACCTCACATCTTTTCTGTGGCCGAGGAAGCCTACCGCACTATGaccagGGAGGAGAAAAACCAGTCTATCATCATCAGTGGAGAGTCTGGCTCAGGAAAAACAGTCTCAGCCAAATTCACCATGCGATACTTTGCTGTGGTTGGAGGAGCAGCACAGCAGACCAGTGTGGAGGAGAAGGTTTTGGCTTCCAACCCAATATTGGAGTCGATTGGGAATGCTAAAACCACACGAAATGACAACAGTAGTCGTTTTGGGAAGTACATCGAGATCGGCTTTGGCAGAAAAGGGAACATCATTGGGGCAAACATGAGGACGTATCTGCTGGAGAAGTCAAGGGTTGTCTTCCAGgCATCAGCAGAGAGGAACTACCACATCTTCTACCAACTGTGTGCCTCCAGGGAGTTACCTGAGATGAGAGCCCTTAAACTGGATGCACCTGAGCATTTCCGCTACACCAGCCAGGGAGGAGAGATGCAGATTCCTGGTACTGATGATCTGTCAGACCTGGAGCGCACTCGCAATGCTTTCACCATCCTGgATGTGCAGCCTGACCAACAGATGGAGCTCTTCCGGATCCTGTCAGCTGTTCTGCACCTGGGAAATGTCAACATCCAAGCCAGTGGGAGAAGTTCTGACCGGAGTTATATTGATgTAGACGACCACCCTCTGGCTGTCTTCTCCAAGCTGTTAGGAGTGGAAGGACCTCAGGTAGCTCACTGGCTGTGTCATCGCAAACTGGCTGTAGGTGGAGAGATGCTGGTCAAACCTGTGTCCGGTCAGCAGGCCATAGAAGCCAGAGATGCACTGGCCAAACATGTTTATGGCCAGATGTTTGCATGGGTTGTCCAGAGGCTCAACTCTGCTCTGCGCACCCAGAGGGGACAGGCCAAATCCTTTATAGGTGTACTAGACATCTATGGGTTTGAGACCTTTGACCGGAACAGTTTTGAGCAGTTCTGTATAAATTATGCAAATGAGAAACTGCAACAGCAATTCAACAGGCACGTGTTCCACTTGGAGCAGGAGGAGTACATCCGGGAAGAGCTGGCCTGGAGCAGGATTGAGTTCAGTGACAATCAGCAGTGCATCAATCTAATAGAGGGACAGCTGGGACTGTTTGATCTTTTAGACGAGGAGTGCAGGATGCCCAAAGGTTCAGATGAGAGCTGGGTGCAGAAGCTGTATGACCAACACCTGACCAACAAGCCCCACCCTCACTTCCAGAAACCTCGCATGTCCAACAGCGCCTTCGTCGTTCTGCACTTCGCGGACACAgtGCAATATGAATGCAATGGCTTTTTAGGCAAGAATCGAGATACAGTCTTTGAGGAGCTCATTAACATTCTCAAAGCAAGTCAGtctgagCTGGTGGCTGAGTTGTTCCAGCAGCAGGGAAATGTTTCCTCTGTGGCTAATGGAAGTGTTCGTTCAGGGAAAAGAGCCACCAAAGAACATAAACTGACGGTGGGCTTCCAGTTCCGTCAGTCCTTACAGATGCTAATGGACACTCTGAACAGCACCACTCCTCACTATGTCCGCTGTATTAAACCCAACGACCTCAAAGAACCTTTTATGTTTGACCCCAGGAGGACAGTCCAGCAATTGCGAGCCTGCGGGGTGCTGGAGACAATTCGCATCAGTGCTGCAGGTTTCCCATCCAGATGGACCTACGAGGAGTTCTTCAGCAGGTACCATCTTCTGCTTCGAGGTTCTCAGGGCCAGGATCAGGCCCAGGCCTCGTGCAGACAAGCCCTGCCTCAGCTCATCCCAGACCCAGACCAGTACTGCTTTGGAAAGACCAAAGTATTTTTCCGGGCCGGTCAGGTGGCTGTACTGGAGAGGCTGAGAGCTGAGAGGCTGCGTGTTGCTGCTGTGATCATCCAGAGCAGGGTCAAAGGATGGCTGGCACGGATTAGATACACCAGGATCTGCTGGGCAACCGTCACCATACAGAGATACTGCAGAGGAGCTCTGGCCAGACGACTTGCCCTGACTCTGCGCTACACCAAGGCTGCTTTAATAATCCAGAAGACCTACCGCATGGTGATGGTCAGACAGATGTTCCTCATGATCCGACAGGCCACCATCACCATCCAGGCCTTCACCAGGGGCACGATGGCGCGCCACAGATACAGACTGTTGGTGGCGGAGCGGGCTGCTGTATTGCTTCAGGCGAGAGTGCGTGGGTGGTTGGCGAGGCAGGCGTACAGGCGAATACATGCGGCGGTGGTGTTCATGCAGTGCTGCGTGCGCCGCAGGGCTGCCAGGAGAGAGCTGATGAAACTAAAGACGGAGGCCCGCTCAGTGGAGAAGTACAGAGAGCTCAACAAGGGCATGGAAGTCAAACTGATGCAGCTGCAGTTGAGAGCAGACCAGGAGGCCAGGGAGAGTGCAGCTTTGAGAGAGACCCTGCACGCAGAGCGAGAGGCCACCAGTGCTGAGCTGGTGGCCCTGAGGGCGACGGTACAGAAActggagagacagaaacaggagaAGCCTCAGCCCTGCGCCGTCATTAGCGAGAAGAAGGTGGAGGAAAGAAGGAGAGCTGAAGAGAAGGCTGCCCAGGAGATCCTTCAACTCACACAAGAGTTACAAGCCCTGCAAAGAGAAAAGGACCATTGttgcaaagagagagaggatctCTCTGCTCGCTTGTTTGAGCAAGAAAAAGCACAAGAAGagcgTGTGCATCAAGCTGTGTCTCAGGCGGGTGCATCTCTGAGGGCGTCGCTggatgaggagaggagaaagtaTCAGGGTCTCCTGAGAGAGTTCACCAGACTGGAGCAGAGATACGACAACCTCAGAGAGATGAGTCTGCTTACTGAGCACTCCAAGGGCCACAGAAGGACGGACTCCACCCAGAGTCTGAGCTTGgagcctctctctccctcccccactGCGTTGTCACCCCAGTCTCTCAACCCACTCTCACCCTTCCCATCTGTCTTCCCGTCCCCGGAGGAGGGCCGCAGGGTCAGTGTGACGTCTCCCTCGATGGAGCGGAGAGCCTCAGTGTGGAGCTTGGAAACGCCAATGGATCAGTTGATGGAGAGGATGGATGTGGCCAAAGACCCGGCAGTGAAGATGAAAGGAGAGGACCTGGCACATGCTTACGATGCCGTACGAGTGGCCAACAAGTTTCTGGAGAGCCAGCTGCGTAGTCGGCGCAGTCAGAGGGAGGAGGATCTGGAGGCTCTGAGGTGCCAGCTTAGTCAAGCCATCTCTGGTTCTTCCTCTGCTGCACAGCGACAGgAACTGCAGGAACTACTCGAGGCCAGAGAGCAAGAGTGTGTCAGATTGAGAAGAGAGCTGAAGGAGCTTAAAAACACAGTGTCACTCAGACGACTCCTGACACAAGCTTTCATTCAAGAGACATCCTCCTGTCAATCCCGACCGAAGCCAGCATCAGTCACTGGTCTGCTGGAATGTAGGAAGAGAGATGAAACCAAGCTCATCAAGAACCTCATCACAGACATCCGTGTCGACAGCGCCCTGTCTCTGCCTCCTGGCCTGCCTGCCAGCGTGCTCTTCCTGTGTGTCCGTCAGGCCGACTGCAGCGGAGACCAAACGTACGCCCGCTCACTTTGTAGCGCTGCTGTCACTGCTATAAAGGCAGCTCTGAAGAAACATAGTAACGATGTAGATATGACAGCTCTGTGGCTAAAAAATGCCTCTCTGCTGCACGACCTGTTGACCCAGCACTCCCCGAAACAGACCCTTGACTCAGACGAACTGGTTCCATTGGCGGCTGATCTGAGTGACTTGATCCGCACCCTGAGTGACCTCTGTATCCAGGCCTATCAGCAGCTCCTCTCCATCACTGAAAAACGCCTACAAAACATCATAGTCCCTGCTCTGTTGGAGAGTGAGACCATCCCAGGGCTGTCTGGATCGGCAGTTAAGTTGGGAACGTCCAGAAAGCGAGCAGGTTCTGACCCCAGGACCGTAGGAGGTGATGCTCCCACAATGGCGGCAGTGCTGAGGGAGCTAGGAGCCCTTCACACCGCTTTGTCCCATCAGGCTCTGCCCCCGTCACAGATGGAGCAGGCCTTCCACCAGCTCACCTACCTCATCTCTGCCTCCGCTCTCAACAGCCTGCTGCTGAGGAAAGACATGTGCTGCTGGAGTCGTGGGATGCAAATACGCTATAATGTGAGTCTGCTGGAGGAGTGGCTGCGTAGCCGAGGTCTGCAGTCAGGGGGTGCTGTGGTCACACTGGAGCCCCTCATCCAGGCGGTTCAGCTGCTGCAGGCTGGGAAAAAGACTGAGTCAGACGCACAGGCCCTTGTTCAGACCTGCACTGCCCTGTCCAGCCAGCAGATAGTGAAGATTCTGACCCTCTACAGTCCCCACAGTGACCTAGATGAAAGAGTCACACTGAATTTTATCCGTACTGTCCAGGGGCTTCTCAAAGGCCGTTCTGACGGTCAGCCTCCACAGCTCCTCATGGATGTGAGACGAGTGTTTCCTGTCACATTTCCCTACTTGCCTCCCCCGGTCCTCCATGCTGAGCAGTTAGTCATCCCAGACTGCCTCAAGATCTCCTTTCTACGCAGAGCCTAGAAAAGGATGCCTTGCCTCTTCAGGGcaatatatattaatgttttagcAAATTTTAATTCCCAATATATTGAATTTAATCCTTTGAAAGTAAAATTACTTCCAGGAGATATTGTGAATTTAATTCCTctctcagatttttttttagtggCACTTACTTTTTAATCTGTTAATTATCAGTGGCTTAGTCTGTATGCTGTAGAAGGTCAGATAACAAACTGAAATGGCACCAATGCcaaaatgtttctttaaaaaaggtagtaaatatttgaataaaacAAGGCAGTTATGTAGTCAAA

Function

NR:

description
unconventional myosin-Vb-like

GO: NA

KEGG:

id description
K10357 MYO5; myosin V

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810466.1 True 5472 mRNA 0.52 35 26350599 26379944

Neighbor

gene id symbol gene type direction distance location
mbd3b LOC103354193,LOC101480296,LOC101063908,LOC104920733,LOC108230843,LOC105938962,LOC103399996 coding upstream 172 26342442 ~ 26350427 (+)
tcf3b tcf3 coding upstream 11389 26306622 ~ 26339210 (+)
map2k2a map2k2 coding upstream 82103 26258304 ~ 26268496 (+)
pias4a pias4,LOC102797537 coding upstream 93152 26244296 ~ 26257447 (+)
atp8b3 LOC108230572,LOC103354223,LOC102796064,LOC102293201 coding upstream 160677 26143887 ~ 26189922 (+)
celf5a celf5,LOC102777648 coding downstream 142400 26522344 ~ 26724401 (+)
polrmt polrmt,LOC101481838 coding downstream 498364 26878308 ~ 26935883 (+)
atp5f1d atp5d coding downstream 710279 27090223 ~ 27100256 (+)
midn midn,LOC101067279 coding downstream 740754 27120698 ~ 27147156 (+)
LOC120565509 slc25a42,LOC103371066,LOC103150429,LOC103463696 coding downstream 1133211 27513155 ~ 27520341 (+)
G98384 NA non-coding upstream 156510 26191868 ~ 26194089 (+)
G98363 NA non-coding upstream 213969 26135237 ~ 26136630 (+)
G98312 NA non-coding upstream 425549 25884516 ~ 25925050 (+)
LOC120565749 NA non-coding upstream 512852 25786325 ~ 25837747 (+)
G98280 NA non-coding upstream 610050 25739131 ~ 25740549 (+)
G98494 NA non-coding downstream 118088 26498032 ~ 26498261 (+)
G98500 NA non-coding downstream 131240 26511184 ~ 26511527 (+)
G98546 NA non-coding downstream 491400 26871344 ~ 26871564 (+)
G98552 hcn2 non-coding downstream 560968 26940912 ~ 26949064 (+)
G98544 bsg non-coding downstream 612954 26992898 ~ 26998445 (+)
LOC120565098 NA other upstream 8306 26339543 ~ 26342293 (+)
zbtb7a zbtb7a other upstream 55217 26283052 ~ 26295382 (+)
oaz1a oaz1,LOC104950707 other upstream 310733 26034751 ~ 26039866 (+)
dot1l dot1l,LOC102793654 other upstream 331228 25991506 ~ 26019371 (+)
slc35a3a slc35a3,LOC101471768,LOC102790943,LOC100705874,LOC108230529,LOC103354215,LOC106515047 other upstream 611810 25730225 ~ 25738789 (+)
micos13 LOC104918748,LOC103371279,LOC104964520,LOC106536194 other downstream 411785 26791729 ~ 26796287 (+)
si:ch211-212d10.2 LOC103371119,LOC104950605,LOC100693321,LOC101487565,LOC102778050 other downstream 992865 27372809 ~ 27377054 (+)
ncanb ncan,LOC104966594,LOC107554802 other downstream 1279752 27659696 ~ 27832855 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other downstream 1648020 28027964 ~ 28084387 (+)
LOC120564865 NA other downstream 1757325 28137269 ~ 28146325 (+)

Expression


Co-expression Network