LOC120565108


Basic Information

Item Value
gene id LOC120565108
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 36237852 ~ 36284806 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810508.1
TCTTTCATaagcctcctcctctcctctcttagcTCAGTCTGTCTGGAACTCTTGACGGAACTTGTCTTCACTTCCCGGGACTTCTCTCCATCATGACTCGGGTTTCTccggccgtgtgtgtgtggctgctgtTTGGGCTGCAGGCTGTTGCTGCGGTGAAGGCCCACTGCTTTCTTGTCCCACCAAAAAAACTAATGGAAAATGTAGACTACAccaaacaggaacatgttgccaGGATTCATTCCGATTTTGATGATGGGAATGGGAATATTGTATACTCTCTAGAAGGCAAGGGTGCAAACCAAAATCCCTTCAATGTGTTTGTAGTCAATCCTAGAAGTGGACACATTCGTGTCACCAAAATTCTTGACAGGGAATTCATGGATTCCTACATGctGACAATTGTTACTAGGTACAAGAATGGCAGCCTTGCAGAAAGCAACTTTGACCTACGAGTCCAGGTTGTAGATGACAACGACAACTCTCCAGTGTTTCAAGACATCCAGACCGGGGTGGTGAATGAAGGCAGTCCTGTAGGGACTACAGTTATGAGAGTAATTGCAACTGATGATGATGAACGAGGGAATAGGAACTCTCAGATCGCCTATCACATCATAGATCAGACTCCAGctcatgacatgtttgagatgAGCAAATCTGGATACATCCTTGTCAAAAATTCTGGCCTGGACAGAGAGaaaacagaTCAGTACGTTCTGACGGTGAGAGGTCAAGACTTAAATGGCGAACCAGGGGGAAACACAGGAACCGGCACAGTTACCATTGATATCCTGGACGTAAATGACAACTGCCCCGTCCTGACCACTGACTTCCACACTATGTGCACCACGGATGTTTCTGTCATTGTGAACGCTGAAGATAAAGATTCCTACCCAAACAGACCTCCTTTTGACTTTGTCATCATCCCAGAGGGCACTCAGGGCAAATGGCAGGTGAACCCTTTAAATGACACTGCAGCTTCCCTAAATGCCCAGGAATCCATGTGGCCTGGATTCTACGAGGTGAAATTTGTGGTGAGGGACAAGCAGGGAGAGGCCTGTCCAGACCCACAGAAAGTGACGGTCGAAGTCTGTACCTGTGTGGACGGGGTGGTGTGTGGAAAACGAGCCACCAGCAAAAAATCAGAGTTCGGACCTTTAGGCATCGGACTGCTGGTCCTGGgtctgctgctgttactacgtAAGTATGATGTGATGCTCATTCTGATGAAGTGGGCTAAGACATTTTACACCTTTGCTGTGCTCACGACAATCACAAGACAGGTCGAGTTTAGTCGTAGTCCAGTTTAGGCCAAAGACAAGGCCAgagtaaatgattcaaaaccaaGACCAAAACTAGGTCGAAGACAGTGAGCACATCTTTTCAAGTGTGAAATAataccaaaatgaagactggaacctttaaaggtcccatgacatggtgctctttggatgcttttatatagaccttagtggtctatAGAGTATTTCCTTTAACCTGTCACATCATCAGTTGAAAACTATTAATATACACAACCCCATACATAGTAAGTGCTGCCATATAGAGAGTAAAAAAGATGTTTGAGTACTTTAGATATGCAGGACACAGTAAGGTCTGACTCTGAATGGGCAGAACATGAAGACAAAGCCTGGGATGTCAGAGAAGTGGTCTCAATACAGGACTCAACATTAAGGACTTAAGCCTGACTGGCTGCTATCAGCTTATCACTAATGT
>XM_039810509.1
TGACAACGACAACTCTCCAGTGTTTCAAGACATCCAGACCGGGGTGGTGAATGAAGGCAGTCCTGTAGGGACTACAGTTATGACAGTAACTGCAACTGATGATGATGAACCAATTTATTTGAACTCTCGGATTGCCTATTACATCATAGATCAGACACCAGCTCATGACATGTTCAAGATGAACAAAAATGGGACCATCCTTGTCAAAAATTCTGGCCTGGACAGAGAGAAAACAGATCAATACGTTCTGCGGTGAGAGGTCAAGACTTAAATGGCGAACCAGGGGAAACACAGGAACCGGCACAGTTACCATTAATATCCTGGACGTGAATGACAACTGCCCCGTCCTGACCACTGACTTCCACACTATGTGCACCACGGATGTTTCTGTCATTGTGAACGCTGAAGATAAAGATTCCTACCCAAACGGACCTCCTTTTGACTTTGTCATCATCCCAGAGGGCACTCAGGGCAAATGGCAGGTGAACCCTTTAAATGACACTGCAGCTTCCCTAAATGCCCAGGAATCCATGTGGCCTGGATTCTACGAGGTGAAATTTGTGGTGAGGGACAAGCAGGGAGAGGCCTGTCCAGACCCACAGAAAGTGACGGTCGAAGTCTGTACCTGTGTGGACGGGGTGGTGTGTGGAAAACGAGCCACCAGCAAAAAATCAGAGTTCGGACCTTTAGGCATCGGACTGCTGGTCCTGGgtctgctgctgttactacTACTTCTTCTGTTGCTGCTCTTCTGCCAATGTGGGGGGGCTTGGGGCTTGCCAGGGGGCTTTACTGAGATGCCTTTCGACACCAAATCACACCTCATTAACTACCGCACTGAGGGCCAGGGAGAGAACATGGAGGTGCCGCTACTGGCTGTGCCAACACAAATAGATGGAAATATGGTCAATGTGAATATGGGCATGACTAACAATACTTTAGCAATGGCACCCATGGCAGGTTTGGATTTCCAGAGATCCATTACTTCCATGGATGGGATTAACAGGGCTGGCTATCAAGAAGTCTTTTCAAGTGGCCACAGAGAAGGGGCATGGGGGATGATGAACCAGCAGGGCGGCAGGGACTTCTACTCAGGAGTAGGTGGAGGAATGTATGACGGCATTGCTCTGCCAGACCACTTCCTGGCACAGTACTACACTCAGAAGGTGGCCAGTGGAAATGACAACCTTGGAGGAAAGGACTGTCTTTTGGTTTATGACTATGGCCTGCACTTCCTCGATGACCTCAGGTCAAAGTTCAAGACCGAGCCGAGCCGagttgagcaggtaccatgtagtggaaaaacgccataagagTCTGGGTTGGAATGCATTGTTGTGATAACATGGGTGGAGATAACCCACTGGAACTGTTCCTAGTCAGCTGACCATGAATTACCTGCTTTCTTGCTCTATACACCTTTGGAGAGAGATATATGTTTGCCTAGCTAAGACTATTATAtttaatacatatatattaaaGCAGAAGCACTTTTAAGCAATAAGATACAAAGTGGGGGTGATCTTGACAAAAACCTAAACATTTGTTTCTGCTAATTTGCACTTTGGTTTATGGTGATCCAGATTGAGCTAAACAAGCTCAATCTGCCTTTACACAGCTCTTGTGTTTATACCATTTGATTGTTGCTCTTGAATGTACTACaggaaatgtttttatgttggacaaagttttttttaggtAAGGTCATGGGTTTTGTGTTATGTCATTTTcagtataaaatgtaaaatggcCAATTATGCTATGTTTAAACTTTAAGACTCAAATCAATTGAGAACGTGAAATCCACAATTGTTTGTGTTGaactaaatttctttttttatcgtGTGTACATGTTCATGCCTATGAATGGTAAAAACTCGTTCATTTATTACGATGCAGACGGATGCTAATGTCttggaagacattttgacaatgCGATAATGACTGTCTCAGGGATGTCCAATGGGAAGCATTTGTCTCACGCTGGCTTACTTTAATAAACTCTTTTGCACAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810508.1 False 1734 mRNA 0.46 7 36237852 36255480
XM_039810509.1 True 2016 mRNA 0.45 7 36248876 36284806

Neighbor

gene id symbol gene type direction distance location
LOC120566096 NA coding upstream 500842 35699825 ~ 35737010 (+)
ddx10 ddx10 coding upstream 559423 35673360 ~ 35678429 (+)
hyi hyi coding upstream 760299 35468011 ~ 35477553 (+)
arhgap39 arhgap39 coding upstream 1576183 34528568 ~ 34661669 (+)
LOC120565866 LOC105938272,LOC105937414,LOC105938273 coding upstream 1780896 34454381 ~ 34456956 (+)
LOC120565107 NA coding downstream 13736 36298542 ~ 36327378 (+)
ttr ttr coding downstream 58489 36343295 ~ 36349730 (+)
b4galt6 b4galt6,LOC104925469 coding downstream 67137 36351943 ~ 36373606 (+)
ctns ctns coding downstream 125062 36409868 ~ 36422475 (+)
nfic nfic,LOC102792909 coding downstream 278648 36563454 ~ 36594440 (+)
G100492 NA non-coding upstream 93764 36143878 ~ 36144088 (+)
G100462 NA non-coding upstream 375525 35862007 ~ 35862327 (+)
G100453 NA non-coding upstream 429461 35808167 ~ 35808391 (+)
G100383 NA non-coding upstream 553626 35681729 ~ 35684226 (+)
G100337 NA non-coding upstream 758242 35478671 ~ 35479610 (+)
G100519 NA non-coding downstream 4643 36289449 ~ 36289686 (+)
G100523 NA non-coding downstream 7220 36292026 ~ 36292243 (+)
G100524 NA non-coding downstream 10332 36295138 ~ 36295493 (+)
G100535 NA non-coding downstream 138054 36422860 ~ 36423129 (+)
G100536 NA non-coding downstream 139786 36424592 ~ 36449148 (+)
dsg2.1 NA other upstream 3253 36215464 ~ 36234599 (+)
G100174 calr3 other upstream 1730300 34504643 ~ 34507552 (+)
G100087 NA other upstream 2359521 33875209 ~ 33878331 (+)
LOC120566032 naaladl2,LOC102797677,LOC101487368 other upstream 2474933 33243213 ~ 33762919 (+)
nlgn1 nlgn1,LOC102797975 other upstream 3359219 32436847 ~ 32878633 (+)
G100568 lmnb2 other downstream 188732 36473538 ~ 36475195 (+)
smim24 NA other downstream 210678 36495484 ~ 36534582 (+)
sass6 sass6,LOC102776185 other downstream 311235 36596041 ~ 36611746 (+)
G100671 NA other downstream 410631 36695437 ~ 36698869 (+)
prrc2c NA other downstream 647849 36932655 ~ 36958360 (+)

Expression


Co-expression Network