LOC120565127 (LOC101485093,LOC102207510)


Basic Information

Item Value
gene id LOC120565127
gene name LOC101485093,LOC102207510
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 28346415 ~ 28353756 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810542.1
TGATTCACTGAGTGATTACtgacaaattatttttattaaaatgattaGGAATACCTCTTGTTTTCATAGTACACAGTGCACATGCGTACAGACTGGAAGTGTTCAAGCTCCAGCCTTGTTTTTCAGTTCAGTGTTCAGTGTTACATAACATTTCCTTATAGAGCATTTCCCCCCAGCCTCCTCCACTCCTCACTCAGATAACATGAGAAAACACCATCATCCTGTTTGCAAGAGCACATTGATTTTACAGAGGGCCTTTTGAAATATACTAATCATGATTTTTCATGCACTTTTGGAATATATGGACTTTACTGGTTGGCTGTTGTTGAGCTTTGTAGTGTTACTCCTGACAGATGTGGTCAGAAACTGGAGGCCACACAGCTTTCCACCTGGACCCTGGGCTGTGCCTTTTCTTGGAAATGTCTTCACAGGAGTGGATTTCAAAACAATGGAAAAGcTTTCTCAGGAGTACGGTCCAGTGTTCAGCCTGAGGAGAGGCAGTGAAAGGATGGTGTTTGTTTCAGGATACAAGATGGTCAAAGAGGCTCTTGTTAACCAGCTAGACAGCTTTACTGATCGACCTATTGTCCCTCTCTTCCATGTTATCTTCAAGGGGCTTGGCATAGCTTTGAGCAATGGTTACCTGTGGAAGAATCAGAGGAAGTTTGCCAACACTCACCTGCGTTACTTTGGAGAGGGCCAGAGGTCACTGGAAAAATACATTCAAGAGGAAAACAACTTCCTCTGTGAAGCCTTTAAAGAGGAACAAGGAAGACCATTCAACCCCCACTACATTATAACAAATGGAGTGGGTAACATCATCTCGTCTGTGCTCTTCGGACATCGCTTTGAATACAGTGATCAAAGCTTTCGGAAGTTTCTGGAGTTGGACAATGAGGCTATTGTGCTCTCTGGCTCTGCTCAGACTCAGCTGTATGATGCCTTCCCGGGCTTGCTGAAGTACCTGCCTggacctcaccagactgtacATGCCAACTATAAGGAGATGATGATTTTCCTGAAAAAGGAAGTAGAGAAGCACCAGGAGGAGTGGAACCCTGATGACCCTCGTGATTATATTGATGCATACCTGTCAGAAATGAAGAAGAAAAAAGAGGATCCCCATGCTGGCTTCAACATTGAAACCCTGCTGATATGCATCCTCGACCTGCTGGAGGCTGGTACAGAAACTTCATCCACCACTTTACGCTGGGCCCTTGTATACATGATGCACTACCCAGAAATACAGGAAAAAGTCCAGGCAGAGATAGACCGAGTAATCGGACAGTCTCGTCAGCCCACCATGGCCGACAGACCCAACATGCCTTACACTGACGCTGTCATCCATGAGATTCAAAGGATGGGAAATATTGTTCCCCTGGGGTTCCCCAAAATGGCCAGTAAAGATGCTACACTTGGAGGATACTTAATACCCAAAGGCACAGCTATAAGTACAATCCTTGCATCTGCGCTGTTTGATAAGAATGAGTGGGCGACCCCAGATATCTTCAATCCGGAGCATTTCTTGGATTCAGAGGACCAGTTCCGCAGAAGAGATGCATTCTTACCGTTTTCAGCAGGTAAACGTGTGTGTTTAGGGGAGCACCTGGCCAGAATGGAgctgtttcttttctttacatCTCTCTTCCAACGCTTCACCATCTCTCCTGTTCCTGGAGAAATGCCCAGCTTGGAAGGTGTAATGGGCTTCACCCATTCTCCTGAGAAGTTCAGGGTGCTAGCTATGCCTCGCTGATTTGCTCCCACATTTTTTCATCATTGCATTACAGTAGCACAAAGCATAAAATACCTCTTAGACAACAATATCCAAGATTACATATCTGACTCGCAACTGAAAAGTAttttgcataaaatataaacccaccaaaaaaaattatataaaaaataaagaagagaTTCACAGTCATCCAGGTCAGAGGTTAAACAAACCAAAAGACATATACTGTTCTACAATATACGTGTACTGATACAATATTGATCTATCACTGGCCTGACAGCTTTTATCTACTGGATCTCAGATAACTTCATGACATGGTCATTAAATCCtccaaacacccacacaggtgattccatttattctggctgattagacctctgctcagtTTGAAGGTGGGCTGGAGCATTGATAAGAATGAATTAGGTCATTAGGAATGATAAGGCTGTCATTTGCCCTTtcctaacaggtgcaacaaaaCTAACAGGACTAACAGGAggctcaggaagatgtcaatcaatcagtctatacacacccacacagtcctgggaatCAGCCAAACTGAAAACACCTTTAATAACATTCATAAACTGTTGATACATTAAGTGTTGCATAACATTTTTCTAAGTACATCATTTAACAGTATATATACTCATATATCCATTAGAACatgatgtaatgtaatagctCCACATTAATTAATCATGTTTTTCATGTTAGCCTCTTTGATTTTGTTACTAGTAAATCAAAAATGTATTCTGTTGCATATATATTACATAACCATGTAACTTCATCTAAAGGCATGCCTTGGTCATTTTTGTagatttttaacaaaataaaaagcaaaagtTAAGTAATTTTAAAATCAGTATTAACCTTCAGGCTGATTCAAGACTCCTCAGCTTTGTGTCGGTGTCCTGCATGACCCTGGGGTTCtaaagggataatgtagagcgagcaCATTTTGCGAGATTTGCTAAAATAGCAGACCGTAGAATGTAGTGATTGACCAATCGGTCACGTATTCAATCAAGCTGTGCAATGAGAATGTTTTATTCTGTTCTTAATTCAATAAATGGTTTTGGTTGTGTTA

Function

NR:

description
cytochrome P450 2J2

GO: NA

KEGG:

id description
K07418 CYP2J; cytochrome P450 family 2 subfamily J

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810542.1 True 2828 mRNA 0.41 9 28346415 28353756

Neighbor

gene id symbol gene type direction distance location
serbp1a LOC106917776,LOC106949688,LOC103463733,LOC104930792 coding upstream 76776 28261055 ~ 28269639 (+)
hsd17b7 hsd17b7,LOC100698819 coding upstream 88811 28253295 ~ 28257604 (+)
ddr2a ddr2 coding upstream 93285 28218202 ~ 28253130 (+)
uap1 uap1 coding upstream 128334 28205492 ~ 28218081 (+)
chaf1a chaf1a coding upstream 154285 28179468 ~ 28192130 (+)
LOC120565126 LOC104959127 coding downstream 19827 28373583 ~ 28379031 (+)
LOC120564926 NA coding downstream 168017 28521773 ~ 28523624 (+)
LOC120564927 LOC103354187,LOC101478050 coding downstream 198874 28552630 ~ 28565249 (+)
si:dkey-183n20.15 LOC104925996,LOC104959169,LOC100703951,LOC102207780,LOC101477488 coding downstream 223836 28577592 ~ 28585350 (+)
LOC120565214 LOC103376736 coding downstream 285990 28639746 ~ 28649744 (+)
G98972 NA non-coding upstream 27527 28312594 ~ 28318888 (+)
G98770 LOC104966597,LOC101073477 non-coding upstream 464104 27879317 ~ 27882311 (+)
G98766 hapln4 non-coding upstream 487292 27855676 ~ 27859123 (+)
G98763 NA non-coding upstream 497477 27848733 ~ 27848938 (+)
G98723 NA non-coding upstream 759307 27586425 ~ 27587108 (+)
LOC120565132 NA non-coding downstream 95787 28449543 ~ 28460210 (+)
G99007 hook1,LOC102781169,LOC106584290 non-coding downstream 215892 28569648 ~ 28570858 (+)
G99108 NA non-coding downstream 334126 28687882 ~ 28688118 (+)
G99189 NA non-coding downstream 616731 28970487 ~ 28972086 (+)
LOC120566147 NA non-coding downstream 638472 28992228 ~ 28992610 (+)
LOC120564865 NA other upstream 200090 28137269 ~ 28146325 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other upstream 262028 28027964 ~ 28084387 (+)
ncanb ncan,LOC104966594,LOC107554802 other upstream 513560 27659696 ~ 27832855 (+)
si:ch211-212d10.2 LOC103371119,LOC104950605,LOC100693321,LOC101487565,LOC102778050 other upstream 969361 27372809 ~ 27377054 (+)
micos13 LOC104918748,LOC103371279,LOC104964520,LOC106536194 other upstream 1550128 26791729 ~ 26796287 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other downstream 418606 28772362 ~ 28774553 (+)
ralgps2 ralgps2 other downstream 421619 28775375 ~ 28865487 (+)
G99297 NA other downstream 1309877 29663633 ~ 29665090 (+)
si:ch73-389b16.1 ccdc18 other downstream 2073747 30427503 ~ 30429291 (+)
G99545 NA other downstream 2456762 30810518 ~ 30811236 (+)

Expression


Co-expression Network