arhgap45b (arhgap45)


Basic Information

Item Value
gene id arhgap45b
gene name arhgap45
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 28000091 ~ 28017688 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810563.1
GTGAATTTGAACAAAGCAACAGTTGTCTGTTTCTGTTGAGTTTGCGTCAGGACTTTCAAATTAGTTTAAATTAATGACAAAGTTCACGTTCTGGGATACAGTGTTTTGAGTGTAACTTAAACGCAATTACATCTTCCCAAAACCGAGTGAAAAGTCTTACCTCACCCTCCTCCTACTCCTACTCCTCCTCTTGAGGAAACTGAACGCACGCGCGCAGAGCGGATGCCGCGAGCGAACAGACAGTTTGCGGtgagctgtctgtctctctgtcagtgaGCCTGCGCGGCTCGATGTGCGACAGCGGCAGGAggaatacagacagacagttatcGTGGCTCCAGGTCGGCCTGGGTGGTACCGAGTACCCGCTGAGCACGAGCGGCAGAGCAGCCAAGTGGCGACtcggggggtgggtgggggggctgTACGTGAAACTCAAAGAAGTCAGCATGGACGGCAAAGGCACACTGAAGATGTTCAGGAAGAAACGGGAACTGATTAAGACGCCATCCATCTCGAAGAAGAGCCGAGCAGGAAGCCCCGGGCCGCAGAGCAGCGCCCAGTCTcTGTCCATCCTTCAGGAGCAGCCTCGGAAAGATGCAGGCGACATCACCCTCTCGTCTTCACCCTCATCCTATTCCTCCTCGTCAACTCTCACCCCGACCTCTGCCGGGTTCCAGGACGTCTCCCTGTCCTGCCCGAGCACCCCCAGCATCCAGCACGGCAAGCTGGCGGCGATGCAAGGGGTGGGCTGCCCGTCCCCTGTGGCCACCCTGAAGAGACCGACTGCGCTGAGCAGACATGCCAGCGCTGCAGGTTTCCCGCTCCAGTCGTGGGTGTTCACTAAAGGCCAGGGGAAAGGGGCCTTGACCCCCACTCCTCCGTCTGAGTATCCAGAGAGCACAGCCATTGAGGTCGAGGACATCCCGGCACTGCTGAGGGACGTGGCGCGCTTCGCAGAGGCTGTGGAGAAACTGAAGGACGTCGTGCTGGCGGAAGGTAAGAAGGAGAGTCAGAGGCCCGTGGCTCACGAGTGTTTGGGGGAGGTCCTACGGGTGCTGCGTCAGGTCATCAACACCTACCCTCTGCTCAACACCGTGGAGATCCTCACTGCTGCTGGCAAGCTCATATCCAAAGTCAAAGGTTTCCACTATGAGGCTTGTAACGAGGCCGATAAAAAGGACTTTGAGAAGGCAATTGAAACCATTGCAGTTGCTTTTAGCAGCAATGTGTCTGAACTGCTGATGGGAGAGGTGGACAGCAGCACGTTGCTCTCCTTGCTGCCCACTGAGAAGAGCAGGTCGATGGAGAACTTGTACGCTGCGACAGGCCAGGGAGCAGACGGGGGACAGTTCAGGAGCGATCTGCAGGACATTGGCAGAGCTGAGGCAGTGGATGTGATCCTCCAAAACAGCGAAGGAGGGGTGGACTCCGCTCTGCTCTATGCCAAAACCATCTCTAAGTACATGAAGGACCTGATGACCTACGTGGAGAAGAGAATCTCACTTGagaCCGAGTTCTCCAAAGGCCTCCAGAGATTGTACCAGTCCTGCAAACACAGCATAACACATCCCCAAATGCCCCTCTTCTCCATCTACTCTCTGGCTCTGGAGCAGGACCAGGAGCAGAGTGTGGGCCTGCAGCAGGCCAACGCCACCCTGTACAACCAGACCTTCATCCAGCCTCTGATGCAGCGTAAGCAGGATCATGAAAAGAGACGGAAGGAGATCAAGGAACACTGGATTCGAGCTAAGAGAAAACTAATGGAGTGTGAAGCGAACCTGCGGAAAGCCAAGCAAGCCTTCATGGTCCGCAGTTCAGGTTgcgaaaaagaaggaaaaaaaagggcgggggggggaggggaggagaaaaaagggggaaagaaaaaaaaaaaggaggagaaaaaaaaaagaaggagatCTACAGCAAAGTCTGTGGAGAAGAAGAAACGATTAGAAGAAGAGGCTCGCAACAAGtCAGACGAGGCGGAGGCCACCTACCGGACATGTATAGCGGATGCCACCACTCAGCAGCAGGAGCTGGAGCACACGAAGGTCACAGTGCTGAGACAACTGCAGGACATCATCAAACAGAGCGACCAGACCATCCGCTCGGCGACCATCTCGTACTACCAGCTCATGCACATGCAGACCGTAGCCTTGCCGGTCCACTACCAGACTCTGTGTGAGAGCAGCAAGCTGTATGACCCAGGCCAGCAGTATGCCGCACACGTGCGCGACCTGCAGCTGCCAGAGCAGCCGACTGTTCAATACACATTTGAGAGCTACAGTCCCTTCAGCTCATCGTCACACCATGGCCACAGACCAAGGAATGACAGTTTCAACACAGAGCATACGAGCCACACGGACGGCCCTGCCACCAGTGTGGATACAGCAGCTGGAGACAACCGAGACACGGAGGTTCACCGCAAGAGACAGGGCCACAAGTCGTGGGGTTCAACAGTGAGCGATGACAGCGTTGGAGGAGACGGAGCCCTAGAGTCTCCTACTGCCAGCAAAAGTGACATCAGTAAAATTGCTCGGACGTCGTCCACTGGAACAATGTCGTCCAATGAGGACGCAGATGAGAAAGACGGGAATGTGACCTCATTTGAAGCTCCAAACATGAACGGCATGGATCCTGATGTAGTGGTGTCCACCCGACCTTTCCGTAACATGGGCCTGTCTAAAGCAGCTCAGACCCACCGGCTGAGGAAGCTACGGACTCCTTCAAAGTGCCGCGAGTGTGACAGCTACGTTTACTTCCAGGGGGCCGAGTGCGAGGAGTGTTTCCTGGCGTGTCACAAGCGCTGTCTGGAGACTTTGGCCATCCAGTGCGGCCATAAGAAGCTGCAGGGCCGTCTGCAGCTGTTTGGCAGGGACTTCTCTCAGGTAGCCAGCTGTGCCAGTGACGGCATTCCCTTCATCATCACCAAGTGTATCTCCGAGATCGAGAGACGGGCACTGAAGATGAAGGGCATCTACAGGGTGAACGGGGTGAAGACTCGTGTGGAGAAGCTGTGTCAGGCCTTTGAGAATGGCAAGGAGCTGGTGGAGCTGTCCCAGTGTTCACCACATGACATTAGCAACGTCCTCAAGCTTTACCTCAGACAGCTGCCAGAGCCCATCATGCTGTTCCGCCTCTACAACCGTCTGATGGGTTTGGCGAAGGAGAGTCTGCATGGCGAAGCATTCACACCAGAAGGAGAGGAGGCCGAGTCCAACAGTACCAACCCAGCAGCGGGCAAGGGTCCGGAGCTGGTGGATCTGGGCCCGGACACAGACCCAgaggtcctggtcctggtcaACAAGCTGAAGGAGCTTCTGAAGGAGCTGCCCAAGGCTAACGTCGCTACGCTGCGCTACATCATTCGCCACCTCCGGAgGATCGCAGAACTAGAGGAAGATAACAAGATGAGTCCCAGTAACTTGGGTATTGTGTTTGGTCCCTCCCTGATGCGTCCCCGTCCGACCGGGGCCACGATCTCCCTGTCCTCTCTGGTCGATTACCCCCACCAGGCCCGCATCGTGGAGTCCCTCATAGTCTTCTATTCATCCATTTTCCAGTCAAAGACCTCTCAGTCCAACAAAACCTGTCGCTCTGATTCCACCTCCACTCCGCAGGAAAGTATTGCAGAGAACAAGATGGGGAGCTCTGCTGATGGAGAGGAGGATGGAGGCAGTGAGGAGCCAAATAAACCGGAATCTGACAAGATGGAGGAGGGATGTGGAAGTTCTTTAGGGTCACTGGGGTCTAGTGAGCAGCTCCCAGACTCCGACTCAGAGCTGGACGAGAGTGGTCAGAGGACTACCCACTGCTGCGGCCTGGTGAAGCAGGAGAGCGAGGTGAGCATGGACGACGATCAGCTGAGCTACAGGGACAGCCTGGACCTGTCCAGCCAGTCTGCAACCCAAACGGACCAGGAACAAGACGCAGATCAGGaccaggacgtagcagagcccCCCGCGCTGCCAGACAGCGGGCCCCCAGATGACGACACCGGGGCAGAGCAGGACCTGAGCGCCTCTCTGGCCGAGCTCAACATGAACcagtccaacaacaacaactatcCATGCTCCCCAAAGTTAAACTTGTCGGGGCTTCGACTGGCACGTCTGTGTGGAAAGAAGTTACCCCTGACCAGAAACCGGGACAGTGAGCCTGAGTTTGTCTGATATCATTATCAAAgtcatactgtgtgtgtatgtgtgtgagaagtCTTTTAGTTTGAGCTGAGTAACAGGATTATTGATattgttttaataattaaaatccTTCATCTGAGAGGGCTGTGTTGTGTACAGCAAGATTTAAGTTTTTAACATGTAGGTGTTTGCAGCTGTATTGATCTATCCTGGCAGTGAAACCTCTGCATGCTTACTGTGGTTTGATGAGACTTGTCATTTCATGAAGGTTTGACTCAAATTATATAGTTTgtattttaaagtgttttacaCGTTGCTCTTGCAAGCTTGAGGAAAATGTGTGTAGCAAAAGCCAATTCTTCTTAAAGTGTTAAAGTGGTTTTATTTCagcactaaaataaaaaaaaaaattaaaatgtagtcTCTTTATAAATGTTGCCTGTATCGCC

Function

symbol description
arhgap45 Predicted to enable GTPase activator activity. Predicted to be involved in activation of GTPase activity. Located in membrane.

NR:

description
rho GTPase-activating protein 45-like isoform X2

GO: NA

KEGG:

id description
K20644 ARHGAP29_45; Rho GTPase-activating protein 29/45

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810563.1 True 4594 mRNA 0.54 25 28000091 28017688

Neighbor

gene id symbol gene type direction distance location
tjp3 tjp3 coding upstream 2677 27972793 ~ 27997414 (+)
si:ch73-63e15.2 sbno2 coding upstream 28636 27894716 ~ 27971455 (+)
rfxank rfxank coding upstream 384624 27612852 ~ 27615467 (+)
tmem221 tmem221 coding upstream 389009 27605960 ~ 27611082 (+)
tmem161a tmem161a coding upstream 415151 27577974 ~ 27584940 (+)
gpx4a gpx4 coding downstream 4257 28021945 ~ 28027238 (+)
LOC120564862 LOC104939946,LOC103370860,LOC101073928,LOC105932471,LOC103155165 coding downstream 68202 28085890 ~ 28090584 (+)
march2 march2 coding downstream 73017 28090705 ~ 28098805 (+)
LOC120564863 NA coding downstream 93897 28111585 ~ 28127231 (+)
si:ch211-129c21.1 LOC103369187 coding downstream 128965 28146653 ~ 28169655 (+)
G98770 LOC104966597,LOC101073477 non-coding upstream 117780 27879317 ~ 27882311 (+)
G98766 hapln4 non-coding upstream 140968 27855676 ~ 27859123 (+)
G98763 NA non-coding upstream 151153 27848733 ~ 27848938 (+)
G98723 NA non-coding upstream 412983 27586425 ~ 27587108 (+)
G98685 NA non-coding upstream 501204 27498223 ~ 27498887 (+)
G98972 NA non-coding downstream 294906 28312594 ~ 28318888 (+)
LOC120565132 NA non-coding downstream 431855 28449543 ~ 28460210 (+)
G99007 hook1,LOC102781169,LOC106584290 non-coding downstream 551960 28569648 ~ 28570858 (+)
G99108 NA non-coding downstream 670194 28687882 ~ 28688118 (+)
G99189 NA non-coding downstream 952799 28970487 ~ 28972086 (+)
ncanb ncan,LOC104966594,LOC107554802 other upstream 167236 27659696 ~ 27832855 (+)
si:ch211-212d10.2 LOC103371119,LOC104950605,LOC100693321,LOC101487565,LOC102778050 other upstream 623037 27372809 ~ 27377054 (+)
micos13 LOC104918748,LOC103371279,LOC104964520,LOC106536194 other upstream 1203804 26791729 ~ 26796287 (+)
LOC120565098 NA other upstream 1657798 26339543 ~ 26342293 (+)
zbtb7a zbtb7a other upstream 1704709 26283052 ~ 26295382 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other downstream 10276 28027964 ~ 28084387 (+)
LOC120564865 NA other downstream 119581 28137269 ~ 28146325 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other downstream 754674 28772362 ~ 28774553 (+)
ralgps2 ralgps2 other downstream 757687 28775375 ~ 28865487 (+)
G99297 NA other downstream 1645945 29663633 ~ 29665090 (+)

Expression


Co-expression Network