mfsd12b (mfsd12)


Basic Information

Item Value
gene id mfsd12b
gene name mfsd12
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 14469044 ~ 14479067 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810580.1
tatatttattttttttttttttacttgtaggCAAACCTAATTCATTTTAACTTATGAAGGAGAGGTGAATATTTGTATAAGCATGATTTAGAGGACAAGTGGGTTCCTTGTATCACTCGCCATGTGAAGAACAAAGAGGAACCAACTGTATTTGATAAGGGTATTATAACTCACGAGTTTTTAAAGCCGCTCTTAATCACGGCTTGGTTATTCATCTAATATAGACTACACCGGAGGCGTGTACATTGCAGAGCTTCATAATAACTTTAAAGACCAAACCAATCTCCAGATGCTCCGAGGATGACACGGTGCACCAGCGcgctttttaaaatttttaaatctttttttttttacgcgtGAAGTTGTCGGTGTGAGTTAAGTGCTGTTGATACTTTAGCTCCATAAAGCTTTTGTTGGAGCATTAATTTATTCCACTGAAAGCTAAACCGGTTCAGCTGACCAGCGTGGGGACACAGCTTGGCATAATCCATTACCCTAAGTTTATTATGTGCTTTATAATTAAGGATATTTTTTTTGAGATCCTCAGACCAAGGTTGAACTGTGTTTTTGCTCGTCTGTTAGTGTAACAAATTGCATTATGTATTTGTAAATATGACCTCGACAGAGCTCTAATTGTGAATAAAGGAAGTTTTATCACAGGACTCAAATCAGTCATGGAGCAGTTTGTGCCTGCTGAACGCTATTTATCAGTCTGCAGGCGGTTGTGTTACGCAGCAGGACATTTTCTAAACGACCTGTGCGCCTCTATGTGGTTCACCTATCTGCTGGTCTACCTCCACTCCGTGCTCGGCTTCCAGAGCACCTATGCAGGTGTGCTGCTGCTGATTGGTCAGATAGCGGACGGAGTCTGCACGCCTCTGGTTGGATATGAATCTGACAGAATAGCGTGCATTTACGGCAAGAGAAAATCCTGGCACCTATTGGGAACTATTTGTGTTGTTGTATCTTTCCCCTTCATTTTCAACCCCTGCCTGGCCTGTAACGACAACACTCCTCAGTGGGCCCGGATTCTTTACTTCTCCCCCTTTATCATCGTCTTCCAGCTCGGCTGGGCAGCCACTCAGATCTCACACCTGTCCCTGATCCCAGAGCTGGTGTCCAGCGAGAGCGCCAAGGTGGAGCTCACTGCGTACAGGTATGCCTTCACTGTGGTGGCCAATATCACAGTATACACTGTGGCCTggctgctctttcacttccaGTCTAAGCAAAATGTGGACCCTGACATCACAGATAACTTGGGCCAGGTGGACATCCCTCTGTTCAGGACGCTGGCCCTCATTATGTTGGGTATTGGAGCTTTATTCTCCCTGATATTCCATGTCGGCACCAAAGAGAAGGGGTCAGCCTCGAGGAGCGAGGATCAGCTGCTCATACCTTTCCCTTCCCAGGAAGTTTTGCCTCGTCCTATATTTCAGTGGAAGCATTGGCTGAAGGAGCCCTCCTTCTACCAGGTGGCTTTCCTGTACATGTGCACCAGACTAATAGTCAACTTATCTCAGACCTACATCTCAGtttatctcacagactcactGATGTTACCAAAGAACTTCATTGCCATCATACCTCTGGTGATGTATGTCAGTGGTTTTGTTTGCTCTCTGGCCATGAAACCAGTCAGCAAGCTCATAGGAATCAGTATTACCTATTTGGTCGGCCTGTTGTTGGTGCTGGGCTTCGCCACCTGGTTGTTTGTGGACAAGAGCATGGGAGCTGAGAGGATCTATGGAGCAGCCGTGCTGCTGGGAGCCGGTTCAGCTACAATCCTGGTCATGTCTCTGTCCATGACGGCCAAACTCATCGGGGAGCAGACGCAAAGTGGAGCCTTTGTTTATGGATCGATGAGCCTCACAGACAAGTTTGCTAATGGTTTGGGGGTCATCCTCATCCAGAGCATACGACCATGCAGCACAGATGTCTGCTGCCCAGACTGTGTTTGGTTTTATCGTGATGTCATGGCGATGGTAACCGGGGGCGTGGGTGTGGCTGCAGCACTTTGCCTGTTCACTCTTCTAATCTGTCCAATCAGGATAGGGAGAGGTTAGGGTTCAAAGTCTGCACTACACATACCATGCTACCACCTAGTGTATGAATCTGTAACTACTCTGCTTTATATAGGGCAGGGCCCTTCAACGTTTTTagaccaaggaccccttagctgaaaaagAGACGGAGCACGGACCTCCTAATACATATATTGTGTAAAATAGAGTTGgatattaaactgggccagaTGTCCAATAGGCTATCTGGAGTAGAACAAATATTGGATTTGGAGCTGTGCCCAGTGTCCCTTATCCTGGGTCTCCCAAGCAGATATGTAAAATCATAAGAGATTGCTTCGTATTCTTACTTGTGAAGCATGGAAGAATATTCTATTGCAGCGTAATGAAAAAGTACCAAATTAAAAACTGGTGGAGTTTTTGATT
>XM_039810581.1
tatatttattttttttttttttacttgtaggCAAACCTAATTCATTTTAACTTATGAAGGAGAGGTGAATATTTGTATAAGCATGATTTAGAGGACAAGTGGGTTCCTTGTATCACTCGCCATGTGAAGAACAAAGAGGAACCAACTGTATTTGATAAGGGTATTATAACTCACGAGTTTTTAAAGCCGCTCTTAATCACGGCTTGGTTATTCATCTAATATAGACTACACCGGAGGCGTGTACATTGCAGAGCTTCATAATAACTTTAAAGACCAAACCAATCTCCAGATGCTCCGAGGATGACACGGTGCACCAGCGcgctttttaaaatttttaaatctttttttttttacgcgtGAAGTTGTCGGTGTGAGTTAAGTGCTGTTGATACTTTAGCTCCATAAAGCTTTTGTTGGAGCATTAATTTATTCCACTGAAAGCTAAACCGGTTCAGCTGACCAGCGTGGGGACACAGCTTGGCATAATCCATTACCCTAAGTTTATTATGTGCTTTATAATTAAGGATATTTTTTTTGAGATCCTCAGACCAAGGTTGAACTGTGTTTTTGCTCGTCTGTTAGTGTAACAAATTGCATTATGTATTTGTAAATATGACCTCGACAGAGCTCTAATTGTGAATAAAGGAAGTTTTATCACAGGACTCAAATCAGTCATGGAGCAGTTTGTGCCTGCTGAACGCTATTTATCAGTCTGCAGGCGGTTGTGTTACGCAGCAGGACATTTTCTAAACGACCTGTGCGCCTCTATGTGGTTCACCTATCTGCTGGTCTACCTCCACTCCGTGCTCGGCTTCCAGAGCACCTATGCAGGTGTGCTGCTGCTGATTGGTCAGATAGCGGACGGAGTCTGCACGCCTCTGGTTGGATATGAATCTGACAGAATAGCGTGCATTTACGGCAAGAGAAAATCCTGGCACCTATTGGGAACTATTTGTGTTGTTGTATCTTTCCCCTTCATTTTCAACCCCTGCCTGGCCTGTAACGACAACACTCCTCAGTGGGCCCGGATTCTTTACTTCTCCCCCTTTATCATCGTCTTCCAGCTCGGCTGGGCAGCCACTCAGATCTCACACCTGTCCCTGATCCCAGAGCTGGTGTCCAGCGAGAGCGCCAAGGTGGAGCTCACTGCGTACAGGTATGCCTTCACTGTGGTGGCCAATATCACAGTATACACTGTGGCCTggctgctctttcacttccaGTCTAAGCAAAATGTGGACCCTGACATCACAGATAACTTGGGCCAGGTGGACATCCCTCTGTTCAGGACGCTGGCCCTCATTATGTTGGGTATTGGAGCTTTATTCTCCCTGATATTCCATGTCGGCACCAAAGAGAAGGGGTCAGCCTCGAGGAGCGAGGATCAGCTGCTCATACCTTTCCCTTCCCAGGAAGTTTTGCCTCGTCCTATATTTCAGTGGAAGCATTGGCTGAAGGAGCCCTCCTTCTACCAGGTGGCTTTCCTGTACATGTGCACCAGACTAATAGTCAACTTATCTCAGACCTACATCTCAGtttatctcacagactcactGATGTTACCAAAGAACTTCATTGCCATCATACCTCTGGTGATGTATGTCAGTGGTTTTGTTTGCTCTCTGGCCATGAAACCAGTCAGCAAGCTCATAGGAATCAGTATTACCTATTTGGTCGGCCTGTTGTTGGTGCTGGGCTTCGCCACCTGGTTGTTTGTGGACAAGAGCATGGGAGCTGAGAGGATCTATGGAGCAGCCGTGCTGCTGGGAGCCGGTTCAGCTACAATCCTGGTCATGTCTCTGTCCATGACGGCCAAACTCATCGGGGAGCAGACGCAAAGTGGAGCCTTTGTTTATGGATCGATGAGCCTCACAGACAAGTTTGCTAATGGTTTGGGGGTCATCCTCATCCAGAGCATACGACCATGCAGATGTCTGCTGCCCAGACTGTGTTTGGTTTTATCGTGATGTCATGGCGATGGTAACCGGGGGCGTGGGTGTGGCTGCAGCACTTTGCCTGTTCACTCTTCTAATCTGTCCAATCAGGATAGGGAGAGGTTAGGGTTCAAAGTCTGCACTACACATACCATGCTACCACCTAGTGTATGAATCTGTAACTACTCTGCTTTATATAGGGCAGGGCCCTTCAACGTTTTTagaccaaggaccccttagctgaaaaagAGACGGAGCACGGACCTCCTAATACATATATTGTGTAAAATAGAGTTGgatattaaactgggccagaTGTCCAATAGGCTATCTGGAGTAGAACAAATATTGGATTTGGAGCTGTGCCCAGTGTCCCTTATCCTGGGTCTCCCAAGCAGATATGTAAAATCATAAGAGATTGCTTCGTATTCTTACTTGTGAAGCATGGAAGAATATTCTATTGCAGCGTAATGAAAAAGTACCAAATTAAAAACTGGTGGAGTTTTTGATT

Function

symbol description
mfsd12 Enables cysteine transmembrane transporter activity. Involved in cysteine transmembrane transport; pigment metabolic process involved in pigmentation; and regulation of melanin biosynthetic process. Located in lysosome and melanosome. Part of late endosome.

NR:

description
PREDICTED: major facilitator superfamily domain-containing protein 12 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810580.1 True 2450 mRNA 0.46 9 14469044 14479067
XM_039810581.1 False 2445 mRNA 0.45 9 14469044 14479067

Neighbor

gene id symbol gene type direction distance location
csnk1g2b LOC106925954,LOC106953035,LOC103468226,LOC104921814,LOC103394965 coding upstream 1756 14424219 ~ 14467288 (+)
zgc:101100 NA coding upstream 45942 14418540 ~ 14423102 (+)
rexo1 rexo1 coding upstream 59622 14391912 ~ 14409422 (+)
mknk2b mknk2 coding upstream 80547 14374703 ~ 14388497 (+)
mob3a LOC104921817,LOC103368804,LOC101067073,LOC100699828,LOC104944351,LOC107392871,LOC108238466,LOC103137270 coding upstream 100490 14362795 ~ 14368554 (+)
si:ch73-61d6.3 LOC107392864,LOC108238350,LOC103359431 coding downstream 1387 14480454 ~ 14498574 (+)
babam1 babam1 coding downstream 58509 14537576 ~ 14544528 (+)
plvapb NA coding downstream 69522 14548589 ~ 14554920 (+)
ano8b ano8,LOC103359425,LOC104965807 coding downstream 99960 14579027 ~ 14619203 (+)
abhd8b abhd8,LOC103359436 coding downstream 145212 14624279 ~ 14637054 (+)
G95372 NA non-coding upstream 99818 14368922 ~ 14369226 (+)
LOC120565959 NA non-coding upstream 205158 14258285 ~ 14263886 (+)
G95299 NA non-coding upstream 246450 14220571 ~ 14222594 (+)
G95297 NA non-coding upstream 260482 14206339 ~ 14208562 (+)
G95287 NA non-coding upstream 323726 14145005 ~ 14145318 (+)
G95447 NA non-coding downstream 67469 14546536 ~ 14639046 (+)
LOC120565827 NA non-coding downstream 308001 14787068 ~ 14791606 (+)
G95492 NA non-coding downstream 400015 14879082 ~ 14879287 (+)
G95493 NA non-coding downstream 444885 14923952 ~ 14925603 (+)
G95496 crb1,LOC102787887,LOC102294192,LOC103365562 non-coding downstream 451445 14930512 ~ 14932081 (+)
LOC120564965 LOC102299696 other upstream 1069300 13390823 ~ 13399744 (+)
LOC120564964 LOC102797871,LOC101481459,LOC102301033,LOC106675533,LOC102797273,LOC102300313,LOC102200286 other upstream 1086297 13379398 ~ 13382747 (+)
LOC120565776 NA other upstream 1126946 13335734 ~ 13342098 (+)
G95046 NA other upstream 1248672 13173025 ~ 13220372 (+)
raver2 raver2 other upstream 1368599 13005568 ~ 13100445 (+)
G95460 NA other downstream 140291 14619358 ~ 14621413 (+)
LOC120565380 NA other downstream 210315 14689382 ~ 14704353 (+)
dennd1b NA other downstream 331301 14810368 ~ 14923845 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other downstream 1044862 15523929 ~ 15632812 (+)
kcnn1b LOC104945110,LOC103355562 other downstream 1810756 16289823 ~ 16301000 (+)

Expression


Co-expression Network