gpx4a (gpx4)


Basic Information

Item Value
gene id gpx4a
gene name gpx4
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 28021945 ~ 28027238 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810603.1
TTTCACAACAAACCGCAGGGCGGAGTCGTGCGGGATTAGCAGCTACAGTGCAGCTATATTTGAATACATGTGGCCTCTCCTATATAAAAAATGAGGCCGTTATTTGCTATTTTGACGTTTGGGGCTGTGGCGAGCAGTGGAGTACTACTAACGATGGTACTGTACTTGATTTTATCCTCAACGTCTGCTCCGACAGAGGACTGGCAGACGGCCACGTCTATTTATAACTTCTCAGCAACAGATATTGATGGCAATTTGGTTTCCTTGGAAAAATACAGGGGGAATGTTGTCATCATCACCAATGTTGCCTCTAAATGAGGCAAAACCCCAGTAAACTACTCTCAGTTTGCGGCAATGCACGCTACGTACGCTGAGAGAGGTTTAAGCATCCTTGCCTTCCCTTCTAACCAGTTTGGGAACCAGGAGCCCGGCAACGAAACTCAGATCAAGGATTTTGCCCATTCCTACAACGCTCAGTTTGACATGTTCGGTAAGATTGATGTGAACGGGGACACCGCTCATCCTTTGTGGAAGTGGCTGAAACACCAGCCTAACGGGAAAGGCTTCATGGGAAATAGTATCAAGTGGAATTTCACCAAGTTTTTGATCAACAGAGAAGGTCAGGTAGTGAAGAGATATGGACCCATGGATGATCCCAGTGTGGTGGAGAAGGATCTTCCCCGATACTTGTAAATACCTAATGGATGATCGATGCCTCACTGATCCTCTGCCCTTTTAGCTCCTTTCTCTGCCTCTCCAAGCACCAGTGAATATAGTTTGGGTCCACCCCAGACCAGTGACGGTTTGTTCATAAACCCGCATGGCGGACAGAGCAGACCTGATGAATATGGCGTGCAAACCACCTGGGAGGATGACCAAGCTTGCATTTATTTGGTTCTCTGGAGAGAAGTGATCCtgaaatacattattaatgGTGTTAGTAGATTAATGTGTGGCATTGTTTTCATAATAAAATGCACTAAGATTTTGCTCTAATGG
>XM_039810604.1
TGTTTCACAACAAACCGCAGGGCGGAGTCGTGCGGGATTAGCAGCTACAGTGCAGCTATATTTGAATACATGTGGCCTCTCCTATATAAAAAATGAGGCCGTTATTTGCTATTTTGACGTTTGGGGCTGTGGCGAGCAGTGGAGTACTACTAACGATGTCTGCTCCGACAGAGGACTGGCAGACGGCCACGTCTATTTATAACTTCTCAGCAACAGATATTGATGGCAATTTGGTTTCCTTGGAAAAATACAGGGGGAATGTTGTCATCATCACCAATGTTGCCTCTAAATGAGGCAAAACCCCAGTAAACTACTCTCAGTTTGCGGCAATGCACGCTACGTACGCTGAGAGAGGTTTAAGCATCCTTGCCTTCCCTTCTAACCAGTTTGGGAACCAGGAGCCCGGCAACGAAACTCAGATCAAGGATTTTGCCCATTCCTACAACGCTCAGTTTGACATGTTCGGTAAGATTGATGTGAACGGGGACACCGCTCATCCTTTGTGGAAGTGGCTGAAACACCAGCCTAACGGGAAAGGCTTCATGGGAAATAGTATCAAGTGGAATTTCACCAAGTTTTTGATCAACAGAGAAGGTCAGGTAGTGAAGAGATATGGACCCATGGATGATCCCAGTGTGGTGGAGAAGGATCTTCCCCGATACTTGTAAATACCTAATGGATGATCGATGCCTCACTGATCCTCTGCCCTTTTAGCTCCTTTCTCTGCCTCTCCAAGCACCAGTGAATATAGTTTGGGTCCACCCCAGACCAGTGACGGTTTGTTCATAAACCCGCATGGCGGACAGAGCAGACCTGATGAATATGGCGTGCAAACCACCTGGGAGGATGACCAAGCTTGCATTTATTTGGTTCTCTGGAGAGAAGTGATCCtgaaatacattattaatgGTGTTAGTAGATTAATGTGTGGCATTGTTTTCATAATAAAATGCACTAAGATTTTGCTCTAATGG
>XM_039810605.1
GGTTGTGGACTGTGGACTGCACTACATGTGCTTTTCTGATGTGGATTTTTCTGATGTGATCAGCCGCTCCCTGTACATGAGGGCAGCGGGTCGTGTGTTCTCTCCCAGTAGTGGGATTGTGGTCTGACAGTGTAGCTGAAGTCGCTCAGGGGGTCTACAGATTTGAACGCTTTCTGCCTTTAGAGGATCTTATTGAAGGGCAGTCATGCACCTGATAGGGTCCACTGTCCTCTTCTGTGTCCTGCTGCAGGCTATGTCTGCTCCGACAGAGGACTGGCAGACGGCCACGTCTATTTATAACTTCTCAGCAACAGATATTGATGGCAATTTGGTTTCCTTGGAAAAATACAGGGGGAATGTTGTCATCATCACCAATGTTGCCTCTAAATGAGGCAAAACCCCAGTAAACTACTCTCAGTTTGCGGCAATGCACGCTACGTACGCTGAGAGAGGTTTAAGCATCCTTGCCTTCCCTTCTAACCAGTTTGGGAACCAGGAGCCCGGCAACGAAACTCAGATCAAGGATTTTGCCCATTCCTACAACGCTCAGTTTGACATGTTCGGTAAGATTGATGTGAACGGGGACACCGCTCATCCTTTGTGGAAGTGGCTGAAACACCAGCCTAACGGGAAAGGCTTCATGGGAAATAGTATCAAGTGGAATTTCACCAAGTTTTTGATCAACAGAGAAGGTCAGGTAGTGAAGAGATATGGACCCATGGATGATCCCAGTGTGGTGGAGAAGGATCTTCCCCGATACTTGTAAATACCTAATGGATGATCGATGCCTCACTGATCCTCTGCCCTTTTAGCTCCTTTCTCTGCCTCTCCAAGCACCAGTGAATATAGTTTGGGTCCACCCCAGACCAGTGACGGTTTGTTCATAAACCCGCATGGCGGACAGAGCAGACCTGATGAATATGGCGTGCAAACCACCTGGGAGGATGACCAAGCTTGCATTTATTTGGTTCTCTGGAGAGAAGTGATCCtgaaatacattattaatgGTGTTAGTAGATTAATGTGTGGCATTGTTTTCATAATAAAATGCACTAAGATTTTGCTCTAATGG

Function

symbol description
gpx4 Enables glutathione peroxidase activity; identical protein binding activity; and phospholipid-hydroperoxide glutathione peroxidase activity. Involved in arachidonic acid metabolic process; lipoxygenase pathway; and protein polymerization. Located in cytosol. Part of protein-containing complex. Implicated in spondylometaphyseal dysplasia Sedaghatian type.

NR:

description
phospholipid hydroperoxide glutathione peroxidase, mitochondrial-like isoform X1

GO: NA

KEGG:

id description
K00432 gpx, btuE, bsaA; glutathione peroxidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810603.1 False 999 mRNA 0.46 7 28021947 28027238
XM_039810604.1 False 974 mRNA 0.46 7 28021945 28027238
XM_039810605.1 True 1072 mRNA 0.47 7 28023712 28027238

Neighbor

gene id symbol gene type direction distance location
arhgap45b arhgap45 coding upstream 4257 28000091 ~ 28017688 (+)
tjp3 tjp3 coding upstream 24531 27972793 ~ 27997414 (+)
si:ch73-63e15.2 sbno2 coding upstream 50490 27894716 ~ 27971455 (+)
rfxank rfxank coding upstream 406478 27612852 ~ 27615467 (+)
tmem221 tmem221 coding upstream 410863 27605960 ~ 27611082 (+)
LOC120564862 LOC104939946,LOC103370860,LOC101073928,LOC105932471,LOC103155165 coding downstream 58652 28085890 ~ 28090584 (+)
march2 march2 coding downstream 63467 28090705 ~ 28098805 (+)
LOC120564863 NA coding downstream 84347 28111585 ~ 28127231 (+)
si:ch211-129c21.1 LOC103369187 coding downstream 119415 28146653 ~ 28169655 (+)
chaf1a chaf1a coding downstream 152230 28179468 ~ 28192130 (+)
G98770 LOC104966597,LOC101073477 non-coding upstream 139634 27879317 ~ 27882311 (+)
G98766 hapln4 non-coding upstream 162822 27855676 ~ 27859123 (+)
G98763 NA non-coding upstream 173007 27848733 ~ 27848938 (+)
G98723 NA non-coding upstream 434837 27586425 ~ 27587108 (+)
G98685 NA non-coding upstream 523058 27498223 ~ 27498887 (+)
G98972 NA non-coding downstream 285356 28312594 ~ 28318888 (+)
LOC120565132 NA non-coding downstream 422305 28449543 ~ 28460210 (+)
G99007 hook1,LOC102781169,LOC106584290 non-coding downstream 542410 28569648 ~ 28570858 (+)
G99108 NA non-coding downstream 660644 28687882 ~ 28688118 (+)
G99189 NA non-coding downstream 943249 28970487 ~ 28972086 (+)
ncanb ncan,LOC104966594,LOC107554802 other upstream 189090 27659696 ~ 27832855 (+)
si:ch211-212d10.2 LOC103371119,LOC104950605,LOC100693321,LOC101487565,LOC102778050 other upstream 644891 27372809 ~ 27377054 (+)
micos13 LOC104918748,LOC103371279,LOC104964520,LOC106536194 other upstream 1225658 26791729 ~ 26796287 (+)
LOC120565098 NA other upstream 1679652 26339543 ~ 26342293 (+)
zbtb7a zbtb7a other upstream 1726563 26283052 ~ 26295382 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other downstream 726 28027964 ~ 28084387 (+)
LOC120564865 NA other downstream 110031 28137269 ~ 28146325 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other downstream 745124 28772362 ~ 28774553 (+)
ralgps2 ralgps2 other downstream 748137 28775375 ~ 28865487 (+)
G99297 NA other downstream 1636395 29663633 ~ 29665090 (+)

Expression


Co-expression Network