scyl3 (scyl3)


Basic Information

Item Value
gene id scyl3
gene name scyl3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 24481703 ~ 24488751 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810628.1
CTTTTACCGGAAGAGTCCGTGTTTACAGCGCAGCTTTCGCTCCACGTTAGCATCGTTGATTCGTCAACAAGTGAATAGGAATTTATGTTGTTCACAGTTTGATCATTTTGTAAAATTACGTATTTAATTTTGCGCCACGCCGCGTTTAGCATGGTTGTTTGGAGGCGGAAGGGCAACCGACAGGCATAGCAATGACGAGCTGGCTAACGTAGCGCCGAGGTtagtcagctaacgttagacaaCTAACACTAGCTAACTTCTCACACAGCAGCGGTAGCTACATCAAGTACAGTGAAACAGGTGCAGGAACAAGCGCGGCCATGGGTGCGGAGAGCAGCGCGTTGCGGAGCTTTACCCTGGAGGAGCCGCTTCTGACCCTGCCCTCCGGACTCACCATGTACTCGGCGAAGCTCCAGGATGGAAAGCCTGCGTCCGTGTTTGTTCACAAGCGGGGCAATGAGGATAAAGTCAACAAAGCTGCCAAGcacctgaAGACCTTGAGGCACCCATGTCTGCTTCGTTTCCTGTCCTGCTCAGTGCAGGACGGCGACATCCACTTGGTGACAGAGCGTGTACAGCCTCTGGAACTGCTGCTGGACAGCCTCTCCCCAGAGGAAATCTGCGCAGGCATCTACGACCTCCTGCAAGCACTTGTGTTTCTGCACGAGAGGGGCAAATCAAGCCACAACAACGTCTGCATTTCATCTGTATTTGTCGGTGAAGACGGTCATTGGAAACTGGGAGGGATGGAGACTGTCTGCAAGTTCTCTGAAGCAACGCCTGAGTTTCTTGCAAGCATTCAGAACGTGAGGGAGGCCAGCTGCGTTCCAACAGAAGAGCAGGTTGAGGGCTTTAAAATGCTTCCGGATAAAAATGCTCACTCTCGGGACTCTTTCTCTTTTGGAATGATGGTAGAGACCCTCATCCCTCTCCTGAATGGCTACGTGTCACAGGAGctgtacgacagtctgcagaaGACTCTGCAGACGGGCCTGCTGAACTCTGACCCCTTGTCTCGACCCCCACTCAGCTCCCTGCtgactcatgactttttcagGAACGACTTTTTGGAAGTGAGGAATTTTCTGAAGAGCCTGACCATGAAGACGGAAGAAGAAAAGAATGAATTCTTCAAgTTTCTTCTAGACCGGGTCCAGAGTCTCCCTGAAGAGCTGATAGCTTCACGCCTTGTCCCCAAACTCCTCAACTCTCTTGTTTTTGCAGAACCCATGGCTGTGAAAAGCTTCCTGCCTCATCTTCTAAGGCCAAAGAAGGATTCCAGTGGTGGCGGTAACGATGAAGAATGCCTGCTGTCTTTGTCCCTTTACCGTAAACACGTGATTCCTCAGCTTCTCAAGCACTTCAAGATCAACGAGGAACACATCCGGATCGTGTTGCTGGCTCACATCCACATCTACGCCGAGTACTTCTCCCACGATGAACTCAAAAACCAGATCCTACCTCAGGTTTTGTTAGGAATGAGAGACACCAATGATTCCCTGGTTGCCATGACGCTGCAGAGTCTGGCAGTGTTGGTGCCCTTGTTGGGGGCTCAGGTGGTGGTTGGTGGAGAGAGGACCAAGGTCTTTAAACGCACCACACCCAACTTCACCAAGTCTACAGAGGTCACTCCTGAAACTTCACCTGTCCATATAGTTGGAGGCCCCCACCCTCAGATGGCCCAGCCTTCAAAGGTCTTGAATTTGTTCCCCAGACCGTCGGGGACTGAAGGCCTGGTCCTGGGTCACATGGGTAGCTTAGGGGGTAGTAGGGTGACACCAAGAAGTTACTCTCTGCCACCAAAATCAGAGGGCAGTAGACAGATGTCTCTACCTTTGAACGGCTTTCATCAGGACCGTGAGATGGAGCCGCTGTCACCCAGCCCAGAGCAGCCCGACAGACTTGAAGGTCCAGCGGAGGACTGGCCCGACTGGAGCGACCCTGAAGAGAGCGAGAGCAGGTCTGGACAGTCAGTCCAGATCCACATTCAGGCCTCAGAGACAGAAGGTCCAGACAGCGGCAGGCTGCCACTCTCGCGCCCGCACTTTGAAGACGAGCCGTGGGACAACTTTGAGGACACTGAACCTACCTCAGATCTCTCCCCTACAGCTCCTTTATCAGACCCAGTTATACTCACAGCGCCCAGAGGCGACACTTCTACGCCTGATGATCCGGAAGCTCTGCCGCTGGGTGCCTCCAAACCCCTCAAGTTGACCTCAACACTGCGACAATCCACACAGAGCAAGACCACTTCCTGCGATGGCTGGGCTCAAGAAGAGAGCGACTCGCACAACCCACTGAACCCCAAGCCCAAAGCTACAGTGCCACGAAAGAATGGTGGGAGAGGAGGTCTTGGGGAGGAGTTCACCATTAaggtgaagaaaaagaaagcgcCGGACCCAGAGCTGGATTTGTTTGCAGACATGGTGCCGGACATCAAACTGTCCTCTCCAGCTCTGCTGCCACTGGAAGAGAGCAGTGTGAGCGACGCTGGACTGTCTAGAGCCTCTTCAGAAAACATTAAATCTCTGCAGGTTGACTCATCCATCGATACTGTAACACTCACTGCCAAGTTCGCAGTTGCCAACCTGACTGAGACTGAAACCGATGGCTGGGGAGATGGAGATGACCTGAACTGGGAGGAAGAGACTGTCTGGTGATGTTTGAGCCATCTGCTTCATTTGGAGCAACAGAACACTGGAAAACTCCAATCCTCATTTCAGAGAGTCAGCTGGAGGTTAACTGCATGATGCAGTAAGATAATGATGGGCTGAGACTTTTTATAACCTATTCTGTTGATTCCTGGACATTATCAGTCTGTTAAGTTACTGGAAGGAGTGGAAGCTTATAGGATGGTGCTGGACTTGGACAAATGACGCCATGTTTAATTGTTTGCCAACTGATACTAGTCACCTCAATATGAATGTCATCTTGTTTTCATCTGCTTCTCaactctttttttgttgttgttttttttgtacgtGCCAACTTCACACCTGGCATGAAAATCAAGATATACTTTTTTGGCAAGGATTGACTACAAAGGCTTGCACTTTGAATGACTGTACAATAGAAATTACGTAATTTATTAGCTTTTGGTTGCTGGTGAAGTAAAGATTTTGCTGTATCAAATATGA
>XM_039810629.1
CTTTTACCGGAAGAGTCCGTGTTTACAGCGCAGCTTTCGCTCCACGTTAGCATCGTTGATTCGTCAACAAGTGAATAGGAATTTATGTTGTTCACAGTTTGATCATTTTGTAAAATTACGTATTTAATTTTGCGCCACGCCGCGTTTAGCATGGTTGTTTGGAGGCGGAAGGGCAACCGACAGGCATAGCAATGACGAGCTGGCTAACGTAGCGCCGAGGTGCAGGAACAAGCGCGGCCATGGGTGCGGAGAGCAGCGCGTTGCGGAGCTTTACCCTGGAGGAGCCGCTTCTGACCCTGCCCTCCGGACTCACCATGTACTCGGCGAAGCTCCAGGATGGAAAGCCTGCGTCCGTGTTTGTTCACAAGCGGGGCAATGAGGATAAAGTCAACAAAGCTGCCAAGcacctgaAGACCTTGAGGCACCCATGTCTGCTTCGTTTCCTGTCCTGCTCAGTGCAGGACGGCGACATCCACTTGGTGACAGAGCGTGTACAGCCTCTGGAACTGCTGCTGGACAGCCTCTCCCCAGAGGAAATCTGCGCAGGCATCTACGACCTCCTGCAAGCACTTGTGTTTCTGCACGAGAGGGGCAAATCAAGCCACAACAACGTCTGCATTTCATCTGTATTTGTCGGTGAAGACGGTCATTGGAAACTGGGAGGGATGGAGACTGTCTGCAAGTTCTCTGAAGCAACGCCTGAGTTTCTTGCAAGCATTCAGAACGTGAGGGAGGCCAGCTGCGTTCCAACAGAAGAGCAGGTTGAGGGCTTTAAAATGCTTCCGGATAAAAATGCTCACTCTCGGGACTCTTTCTCTTTTGGAATGATGGTAGAGACCCTCATCCCTCTCCTGAATGGCTACGTGTCACAGGAGctgtacgacagtctgcagaaGACTCTGCAGACGGGCCTGCTGAACTCTGACCCCTTGTCTCGACCCCCACTCAGCTCCCTGCtgactcatgactttttcagGAACGACTTTTTGGAAGTGAGGAATTTTCTGAAGAGCCTGACCATGAAGACGGAAGAAGAAAAGAATGAATTCTTCAAgTTTCTTCTAGACCGGGTCCAGAGTCTCCCTGAAGAGCTGATAGCTTCACGCCTTGTCCCCAAACTCCTCAACTCTCTTGTTTTTGCAGAACCCATGGCTGTGAAAAGCTTCCTGCCTCATCTTCTAAGGCCAAAGAAGGATTCCAGTGGTGGCGGTAACGATGAAGAATGCCTGCTGTCTTTGTCCCTTTACCGTAAACACGTGATTCCTCAGCTTCTCAAGCACTTCAAGATCAACGAGGAACACATCCGGATCGTGTTGCTGGCTCACATCCACATCTACGCCGAGTACTTCTCCCACGATGAACTCAAAAACCAGATCCTACCTCAGGTTTTGTTAGGAATGAGAGACACCAATGATTCCCTGGTTGCCATGACGCTGCAGAGTCTGGCAGTGTTGGTGCCCTTGTTGGGGGCTCAGGTGGTGGTTGGTGGAGAGAGGACCAAGGTCTTTAAACGCACCACACCCAACTTCACCAAGTCTACAGAGGTCACTCCTGAAACTTCACCTGTCCATATAGTTGGAGGCCCCCACCCTCAGATGGCCCAGCCTTCAAAGGTCTTGAATTTGTTCCCCAGACCGTCGGGGACTGAAGGCCTGGTCCTGGGTCACATGGGTAGCTTAGGGGGTAGTAGGGTGACACCAAGAAGTTACTCTCTGCCACCAAAATCAGAGGGCAGTAGACAGATGTCTCTACCTTTGAACGGCTTTCATCAGGACCGTGAGATGGAGCCGCTGTCACCCAGCCCAGAGCAGCCCGACAGACTTGAAGGTCCAGCGGAGGACTGGCCCGACTGGAGCGACCCTGAAGAGAGCGAGAGCAGGTCTGGACAGTCAGTCCAGATCCACATTCAGGCCTCAGAGACAGAAGGTCCAGACAGCGGCAGGCTGCCACTCTCGCGCCCGCACTTTGAAGACGAGCCGTGGGACAACTTTGAGGACACTGAACCTACCTCAGATCTCTCCCCTACAGCTCCTTTATCAGACCCAGTTATACTCACAGCGCCCAGAGGCGACACTTCTACGCCTGATGATCCGGAAGCTCTGCCGCTGGGTGCCTCCAAACCCCTCAAGTTGACCTCAACACTGCGACAATCCACACAGAGCAAGACCACTTCCTGCGATGGCTGGGCTCAAGAAGAGAGCGACTCGCACAACCCACTGAACCCCAAGCCCAAAGCTACAGTGCCACGAAAGAATGGTGGGAGAGGAGGTCTTGGGGAGGAGTTCACCATTAaggtgaagaaaaagaaagcgcCGGACCCAGAGCTGGATTTGTTTGCAGACATGGTGCCGGACATCAAACTGTCCTCTCCAGCTCTGCTGCCACTGGAAGAGAGCAGTGTGAGCGACGCTGGACTGTCTAGAGCCTCTTCAGAAAACATTAAATCTCTGCAGGTTGACTCATCCATCGATACTGTAACACTCACTGCCAAGTTCGCAGTTGCCAACCTGACTGAGACTGAAACCGATGGCTGGGGAGATGGAGATGACCTGAACTGGGAGGAAGAGACTGTCTGGTGATGTTTGAGCCATCTGCTTCATTTGGAGCAACAGAACACTGGAAAACTCCAATCCTCATTTCAGAGAGTCAGCTGGAGGTTAACTGCATGATGCAGTAAGATAATGATGGGCTGAGACTTTTTATAACCTATTCTGTTGATTCCTGGACATTATCAGTCTGTTAAGTTACTGGAAGGAGTGGAAGCTTATAGGATGGTGCTGGACTTGGACAAATGACGCCATGTTTAATTGTTTGCCAACTGATACTAGTCACCTCAATATGAATGTCATCTTGTTTTCATCTGCTTCTCaactctttttttgttgttgttttttttgtacgtGCCAACTTCACACCTGGCATGAAAATCAAGATATACTTTTTTGGCAAGGATTGACTACAAAGGCTTGCACTTTGAATGACTGTACAATAGAAATTACGTAATTTATTAGCTTTTGGTTGCTGGTGAAGTAAAGATTTTGCTGTATCAAATATGA

Function

symbol description
scyl3 Predicted to enable ATP binding activity and protein kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human SCYL3 (SCY1 like pseudokinase 3).

NR:

description
protein-associating with the carboxyl-terminal domain of ezrin isoform X1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG:

id description
K17542 SCYL3; SCY1-like protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810628.1 True 3137 mRNA 0.50 14 24481703 24488751
XM_039810629.1 False 3056 mRNA 0.51 14 24481703 24488751

Neighbor

gene id symbol gene type direction distance location
foxd2 LOC104918470,LOC103372816,LOC100707784 coding upstream 193014 24287104 ~ 24288689 (+)
foxe3 foxe3,LOC104952243,LOC102794361 coding upstream 200639 24278396 ~ 24281064 (+)
ankrd24 ankrd24,LOC106918341,LOC106947862,LOC102780339,LOC103142601 coding upstream 298675 24168358 ~ 24183028 (+)
s1pr3a LOC104942240,LOC103398206 coding upstream 344189 24133664 ~ 24137514 (+)
tle2b LOC103463550,LOC105936873,LOC103142606,LOC108230720,LOC101484064,LOC102310211,LOC101064354 coding upstream 483319 23913948 ~ 23998384 (+)
sele NA coding downstream 26683 24515434 ~ 24519540 (+)
LOC120565835 NA coding downstream 31883 24520634 ~ 24524358 (+)
LOC120566076 NA coding downstream 35722 24524473 ~ 24531588 (+)
atf6 NA coding downstream 101575 24590326 ~ 24627700 (+)
LOC120565979 NA coding downstream 158119 24646870 ~ 24652453 (+)
LOC120565067 NA non-coding upstream 116528 24309609 ~ 24365175 (+)
G97807 sac3d1 non-coding upstream 225622 24254470 ~ 24256081 (+)
G97789 NA non-coding upstream 267844 24211860 ~ 24213859 (+)
G97788 odf3l2,LOC104949085 non-coding upstream 272413 24208229 ~ 24209290 (+)
G97728 NA non-coding upstream 390384 24090543 ~ 24091319 (+)
G97896 LOC104918463,LOC104952282 non-coding downstream 23220 24511971 ~ 24513033 (+)
G97938 NA non-coding downstream 149715 24638466 ~ 24642085 (+)
G98014 LOC106904844,LOC106963772,LOC102314236,LOC103463589,LOC106513892,LOC102207185,LOC100706092 non-coding downstream 296045 24784796 ~ 24785342 (+)
G98015 NA non-coding downstream 298580 24787331 ~ 24787540 (+)
G98019 mknk1 non-coding downstream 344686 24833437 ~ 24835517 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other upstream 273562 24204341 ~ 24208141 (+)
cdc34a cdc34,LOC103368917,LOC104923648,LOC103397164,LOC107393183,LOC103156874 other upstream 831190 23631119 ~ 23650513 (+)
G97596 lpl,LOC108280930,LOC105906969 other upstream 1003885 23474782 ~ 23477818 (+)
LOC120565078 LOC104955513,LOC104923635,LOC103365215,LOC100690174 other upstream 1101328 23378731 ~ 23380375 (+)
pole4 NA other upstream 1158219 23321464 ~ 23323484 (+)
LOC120565649 LOC103373964,LOC107081966 other downstream 260266 24749017 ~ 24765225 (+)
G98012 dmbx1,LOC103373966,LOC108230579 other downstream 293167 24781918 ~ 24783881 (+)
elovl1b LOC106963699,LOC101078639 other downstream 363536 24852287 ~ 24873916 (+)
G98194 NA other downstream 1044074 25532825 ~ 25547089 (+)
slc35a3a slc35a3,LOC101471768,LOC102790943,LOC100705874,LOC108230529,LOC103354215,LOC106515047 other downstream 1241474 25730225 ~ 25738789 (+)

Expression


Co-expression Network