LOC120565169



Basic Information


Item Value
gene id LOC120565169
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 20652948 ~ 20662698 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039810645.1
GCAAAAACTGGCTATAAGGAAGCCCCTGGTTGCAGTCGTCCACTATCACCAGTCATGAGGGTGCTTGTGCTAGCCTTCACTGTGGCCCTTGCGGCGGGTAACCAGGTCAATTTTGCTCCAGAGTTTGCCACTGGAAAGTCCTACGTCTACAAATATGAGGCCTTTATTATGGGCGGCCTTcctgaggagggtctggcacgCGCCGGAGTGAAAGTCATCAGCAAAGTTTTAATCAGTGCCGCAGAAGCAGACACCTTCGTGCTGAAGCTTGTAGACCCGGAAATCTTTGAGTACAGTGACATCTGGCCCAAAGATGCTTTCATCCCAGCCACCAAGCTCACTTCAGCCCTGGCTGCTCAGCTCTCGACACCCATCAAGTTTGAGTATGTGAACGGTGTTGTCGGCAAAATGTTTGCACCCGCTGGCGTCTCTGAAACTGTGCTGAATGTCTTCAGAGGAATCCTCAACATCTTCCAGCTGAATATCAAGAAGACTCAGAACGTCTATGAGCTGCAAGAGCCTGGAGTACAGGGTGTGTGCAAAACCCACTACATCATCAGTGAGGACGCAAAAGCTGACCGCATCCTGTTGACCAAGACTAAGGACCTGAACCATTGCCAGGAGAGAATCATTAAGGACATCGGCTTGGCTTACACAGAGAGATGTGCTGAGTGTGAGGCTAGAGGAAAGAGCCTGAACGGAGCCGCTGCTTTTAGCTACATCATGAAGCCAGCAGCCACAGGTTCTTTGATCTTGGAGGCAACTGGTACAGAGCTCATCCAGTTCTCACCTTTCAACATCATGAATGGCGCTGCCCAGATGGAGGCTAAGCAAATCCTGACCTTCATTGAGATCGCGACGGCCGCAGTGGAACACATCAGAGATGATGTTCCATATGTTCACCGTGGATCCCTGCAGTACGAGTTTGACACCGAGCTTCTCCAGATACCCATCCAGCTTCTGAAGATCAGCAATGCTGAGGCACAGATTGTTGAGATTCTAAACCACCTGGTGACTTCCAATGTGGCCATGGTCCACGAAGATGCCCCTCTGAAATTCATTGAGCTCATCCAGCTGCTACGTGTGGCCAGATTTGAGAGTATTGAGGCCCTCTGGACTCGGTTCAAAGCTAAATCCGAATACAGGCACTGGATCCTAAATGCTGTCCCTGCCATTGGTACTCTTGCTGCTTTAAAGTTCTTCAAGGAGAAGTTCCTTGCTGGGGAGTTGAGTATTGCCGAAGCTGCTCAAGCATTTCTGGCATCTGTCCAAATGGTGACAGCCGACCTGGAGGTTATCAAGCTTGCCGAGGGCCTGGCCATGAACCCCAAGATACAAGAAAACCCAGTTCTGCGTGAGATTGTCATGCTGGGCTATGGCACCCTGGTTGCTAAATACTGTGCAGAGGACCCAACTTGCCCAGCTGAGCTAGTGAGGCCCATCCATGAACTTGTTATTCAGGCTGTTGCCAGAGGTGAAATTGAGGAGGTCATTATCACTCTCAAAGTCCTGGGTAATGCTGGACATCCTGCCAGCCTGAAGCCAATCATGAAGCTCCTGCCTGGCTTTGGAAGTGCTGCTGCTGGCCTGCCACACAGAGTTCACATTGATGCTGTTTTGGCCCTGAGGAACATTGCTAAGAAGGAGCCCAAGATGATCCAGGAAATGGCTGTTCAGCTGTTCATGGACAAGGCTCTCCACCCAGAGCTACGAATGGTTGCTGCTATCGTAATGTTTGAGACCAAGCTGCCAATGGGTCTGGTGACTACTCTCGCCAATGTCCTCTTgaaagaaaataatctgcagattgtTAGCTTTGTCTACTCCTACATGAAAGCCATGACCAAGAACACCGCTCCTGATTTTGCCTCTGTTGCTGCTGCCTGTAACGTTGCTGTGAAGCTCCTTAGCCCCAAATTTGACAGAATGAGCTATCACTTCAGCAGAGCTTTCTATTTAGATACCTACCACAACCCCTTGATGATGGGTGCTGCTGCTAGCGCCTTCTATGTTAACAATGCTGCAACTCTTTTTCCAAGAACCATTGTGGCCAAAGCTCGCACCTACTTTGCAGGAGCTTATGCTGATGTCCTTGAGctTGGAGTAAGAACTGAGGGAATGCAGGAGGCCCTTCTGAAAATACAAAAGTCTCCAGAGAATGCTGACAGGATGACGAAGATGAAACAAGTTATAAAGGCTCTTTCTGAGTGGAGGGCTCATCCTTCCAGCCAGCCTCTGGCCTCTGTGTATGTGAAATTCTTTGGACAGGAAATCGCATTTGCCAACATTGACAAAGCCATTATTGATCAGATTATTGAGctttcCAGAGGACCAGCAATCCACACTTATGGCAGGAATGCTTTGAATGCTGTGATGTCTGGGTTCGCATTTCATTTCACAAAACCAATGCTGGTTGCTGAAGTTCGTCGCATCTTTCCCACCACCGTTGGTCTGCCCATGGAGCTCAGTTTCTATACTGCTGCTGTGGCTGCTGCCTCTGTTGACCTCCAAGCCACTGTGACACCACCTCTGCCTGCGGACTTCAATGCTGCCCAGCTTCTGAAGTCTGACATCAACATCAGGGCTGACATTACTTCAAGTGTGTCCATGCATACCTACGCAGTTATGGGAGTGAATACTGCTTTCGTCCAGGCTACCCTGATGTCAAAAGCCAGAGTTCACACAACTGTTCCTGCAAAGATGGAAGCAAGAATTAACATGATTAAGGGGAACTTCAAGCTGCAGTTCCTGCCTGTTCAGGGCATCGATAAGATTGCAACTGTATTTGTTGATACTTTTGCTGTTGCAAGAAATGTGGAAGACCTTGCAGCTGCCAAAATCACACCAGTGGTTCCAGCTGAAGTTGCAGCACAGACATCAAGGGAAACCTTTTCTTCAAAGATTTCAAGGATAGCATCCTCTCTGGCTGATGATATGTCAGTGTCATCTGAAATCCTTCCTGTTGACTTGCCAAGTAGAATTGTCCCCAAGGcctttgaaaagaaaatgtgtgctGTAATCGAAACCTTCGGAATCAAGGCATGCACTGAGATTGAATCTCGCAACGCAGCCTTCATCAAAAACTGCCCACTCTACACCATAATTGGAAAACATGCGGTCGTTGTTGAGGTTGCTCCAGCTGCCGGACCAGTCGTCGAGAAGATTGAAATTGAGGTTCAGGTTGGAGATAGGGCAGTAGAAAAGATCCTCAAAGTCATTAACCTGAACGAGGAAGAGGAAATAAATGAGGACAAAAACGTCCTGATGAAACTCAAGAAAATCCTGGTTACTGGTCTGAAGAACAGCACAGCAGCATCCTCCAGCTCCAGCAGCTCCCGCTCCAGCAGCTCCTCCTCCGCATCATCCAagtcctcctccagctcctcctccgCATCATCCAagtcctcctccagctcctcctccagatcctcctccagctcctcctccgCATCATCCAagtcctcctccagctcctcctccagctcctcctccagctcctcctctcGCTCCAAGAGCAAGGCAGTTGGCAAGGCATCAAAGAGACTGAGCAGCTCCTCCAGCGCACGCTCCAGCAGTGCTTCAAGCAGCCAGTCTTCTCTCATGTCCAGCAGCCCCTcctccagctccagctccagctccagctccagctcctCAAGGGCCAGATCATTGTCCAAGCAACAACTGTATGAAATGAAGTTTATGAAGAACCACATCCACCAGCATGCCCTCTCCACAGCCCGTGCCAACAGCAAGAGCAGTGCCGACAGCTTCGAGACCATCTACAATAAGGCCAAGTACCTCTCTAATGCTCTCGCTCCTATTGTGACTATTCTCATCCGTGCTGTGAGAGATGACCACAAGGTTCAGGGATACCAGATTACAGCTTACTTTGACAGAGATACTGACAGACTTCAGGTCATTTTTGCCAACCTGGCTGAGAATGACAACTGGAGAATCTGTGCCGATGTTGTGATGCTGAGTTACCACAAGCTGATGGCCAAGATTGCCTGGGGCATTGAGTGCAAACAATACAAGACTGAGATCACAGCTGAGACTGGTCTTGTGGGTAAAGACCCTGCAGTCGGTGTTAAGGTTGCCTGGGACAAACTTCCAAAGAGCATGATGCGCTATGCAAAAAGGATCTCTCAGTACATTTCCCGTGTCGCTAAGGAATATGGAATAAGCCTGGTAAAGGCAAAAAATGTTCGTAATCAGATCAGACTTTCTGTGGCTTCTGCTTCTGAGACAAGCCTGAATGTTGTGCTGAAGACACCAAAGAGGACATTATACATATTTGGTGTGCATCTCCCTATTGCTCTGCCAATTGGTGACACTGCTGCTGAGTTAGGATCCTACCAAAGCAACTGGGCTGACAAGATCTCCTACATGCTCACCAAGGCTCATGCAGCTGAGTGTTCTATGGTCAAAGACACAGTGATCACATTCAACAACAGGAAATACAAGAACGAGATGCCCCACTCTTGCTCCCAGGTTTTAGCTCAGGATTGTACCCCGGAACTTAAATTCATTGTTCTGCTGAAGAGGGATCAACCAGAGGAACAGAACCAGATCAATGTGAAGATCGGAAACATTGATGTGGACCTGCATCCAAAGGGCAGTGTTATCATAGTGAAGGTTAACGGAGTAGAAATCCCTATCAACAACCTGCCATATCAGCATCCCAcagGCAAAATTCTGATCAGGCAGAAAGGTGAGGGTATTGCGCTCCATGCTCCCAGCCATGGTCTCCAGGAGGTCTACATTGATCTGAACGAGCTGAAGGTCAAAGTTGTGGACTGGATGAGAGGACAGACCTGTGGACTCTGTGGAAAGGCTGACGGAGAAATCAGACAGGAGTACCGCACACCCAACGAACGCCTGACCAAGAACGCAGTCAGCTATGCTCATTCCTGGGTTCTGTCTGGAAAGAGCTGCCGGGATGCCTCTGAGTGTTACATGAAGCTTGAATCTGTGAAGCTGGAGAAGCAGGTGATCCTCCATGGCCAAGTGTCCAAATGCTACTCTGTTGAGCCCGTGCTGCGCTGCCTGGCCGGCTGCATGCCTGTGAGGACAACGATCGCCACTGTTGGCTACCACTGCCTGCCCGTTGATTCTAACCTGAACGTCTCTGAGGGTCTGAGCAGCATCTACGAGAAGAGCATTGACCTGATCGAAACAGCAGAAGCCCACCTGGCATGTCGCTGCGCCGCCCAGTGCGCTTAATCTTGTGGTCTTCATTcatattatattttactttttttcataaaagtaTTTTAAGTACTTTGTTTGaactgttatttaaataaattgcA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039810645.1 True 5312 mRNA 0.49 34 20652948 20662698

Neighbor


gene id symbol gene type direction distance location
vtg2 NA coding upstream 22611 20620595 ~ 20630337 (+)
spata1 spata1,LOC102789799 coding upstream 47611 20598582 ~ 20605337 (+)
rpf1 rpf1 coding upstream 57509 20588298 ~ 20595439 (+)
LOC120565357 NA coding upstream 65333 20582506 ~ 20587615 (+)
dnase2b dnase2b,LOC108234386,LOC107392715 coding upstream 70684 20576523 ~ 20582264 (+)
LOC120565171 LOC104931934 coding downstream 6638 20669336 ~ 20671151 (+)
mfn1b mfn1 coding downstream 94089 20756787 ~ 20774813 (+)
actl6a actl6a coding downstream 147485 20810183 ~ 20816886 (+)
ndufb5 ndufb5 coding downstream 157550 20820248 ~ 20824575 (+)
usp13 NA coding downstream 162822 20825520 ~ 20867988 (+)
G96742 NA non-coding upstream 37746 20614932 ~ 20615202 (+)
G96692 NA non-coding upstream 167062 20474807 ~ 20485886 (+)
LOC120565515 NA non-coding upstream 182201 20468553 ~ 20470747 (+)
LOC120565226 NA non-coding upstream 363567 20266651 ~ 20289381 (+)
G96653 NA non-coding upstream 603731 20047879 ~ 20049217 (+)
G96753 NA non-coding downstream 8968 20671666 ~ 20674195 (+)
G96754 ssx2ip non-coding downstream 11559 20674257 ~ 20676737 (+)
G96758 NA non-coding downstream 38741 20701439 ~ 20701938 (+)
G96775 NA non-coding downstream 80369 20743067 ~ 20743775 (+)
G96777 NA non-coding downstream 86514 20749212 ~ 20749896 (+)
prkacba prkacb other upstream 88124 20548999 ~ 20564824 (+)
G96513 NA other upstream 1121271 19530767 ~ 19531677 (+)
G96418 tsc22d2 other upstream 1867312 18782600 ~ 18785636 (+)
nmur1a LOC103368681,LOC104952433 other upstream 1987835 18646703 ~ 18665113 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 2793537 17855631 ~ 17859411 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 748638 21411336 ~ 21441558 (+)
lsm7 lsm7,LOC102793261 other downstream 892196 21554894 ~ 21557731 (+)
G97093 NA other downstream 1028199 21690897 ~ 21782000 (+)
G97321 NA other downstream 1620948 22283646 ~ 22287272 (+)
LOC120565764 LOC103367403 other downstream 1822813 22485511 ~ 22491235 (+)

Expression



Co-expression Network