LOC120565214 (LOC103376736)



Basic Information


Item Value
gene id LOC120565214
gene name LOC103376736
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 28639746 ~ 28649744 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039810759.1
atcacacTCCTCCTTCAGTCCTTCCAGCCACGCACACACTGGCAGGGCAGCTGTCTGCATTGGGTTGTACAGTAGCCTATGCTGCCTGGGATTGTTTTGAAACTACCTTTCCTTAAAGTCTGGCATCGGACGGTGAacgagggagaaagagagagtccgagaagagacgagacgagatttGTTTTGGTAATCTTCTTACTGTGTAGCCGGAGGACAGAGATGATGGGGACCAAAGTGTGGATTGCGCTTTGTGCGCTGCTACTCATTAACTCGGGATCCGCTGATCAAAATGGTGAATTTGCTGCTGACTCCTCTGCTCCAAAAAGTGCTTCTAGTAGTCAGGCGGCTCCGACGGCTCCAGAGTCTGTACCCGGTTCTACCGTGGACCCCATCAGTTCTACCACACTTTCCAAACCAAGTTCAAGAGACACCAGCTGTTTGAGCAGCAACACGACTACAAAAGGGGAAACCATCTCTGCGACACCCGAACCAAAGAGAGTTAACGATACCAAGACCCACTCTCCCTCAGAGGCTGCCCTTCCTGAAACCAATGTGACTATACAGCCTTCAGTCCCTCCTGAGAGCCACGCCCCGGCCACTGACACCCCCCTTACCCCCACCGCCGCCGTCCCCGCACCCACAACTCACCCTACCACTGTGGACACACCGACCACCACGCCACCCACAACACATCCTGCTGCACTTCCACCTGACTCCAGTACCCCATCAAACCAGCCCACTCACAACGTAACACACCCATCCACTCCTGTCCCAACGCCAAAGCCTGAAACTACCACGACCACTGTCGTCGCCCAGGCCAGTTCAACATCCAGCACCAGCTCCTCTCAAAAGCCCCCGAATTCTGAGTCGCCGACGCTGACATCTCCACGACACACTTCGCAGTCCGACGGGCATCCTGAGACCTCCAGCGAAGCCCACCTAAAGTCCACCATCAACCCGCCGAGCAGCCCCTCCGCGCAGGCCAATCCCCGTGCTGAAACCCCCTCCCAGCTCAACGTTGGGGGAGACCCGACGATGGTCCATGACTCGCCCACATTAGACCCCCTCCTGGCTGGCCTGGTGTCAGCCTTCATCATCACTGCTGTCATCATCactctgctcctcttcctcaaaCTGCGCCAGAGAGACAACAGACCAGAGTTCCGCAGGCTGCAGGACCTACCTATGGACGATATGATGGAGGACACACCCTTGTCCATGTACAGCTACTGATGGAGGCATGACTGAAAAATGTTGGCGACCAAATACTCtccttgaatccaggctgatgcTGCAGCGGTTGCCGAACTTTCCTTAATCTGCACCAAACAGAAAGAATCCTGGGTAGGTGTGAGCAAACATCTGGATCGCTTCCATTTTCCTAGCTCCCACTGACATGTAGGAAAAAGGACATGACTGAATGGACAATAAAGATATGGCCCATGTTGGGGtcgttttcttttttgcaaaaGTCCATTTTGGTGCCTGTAATTACAAATTAGGCCCACGCCTCTGTTGAATACTGTATGCTTAATATTTTTCAGCCCATGTTTTGGGGTGTGGGAGTTGTATAATATATTTGGATTTCCCTAGCGTTGAAAAGGGTCGGTTTGAAACACACCTGGACACAGATTCAGCCTGTCCTGCTAGACTCTTACCTGAGGGCACTCGTCTAATTAGTGTTAAAAAGTCTGGCACCCTAAGAGGCCAGATAAAAGAAATGAACATAAGAAATGGCCTGATTATAGTGTTAAAAAAGTTGCACTTTACTTTTTCAGCAGTGGAAAGAAATGGAcaaatatgtttgtgtatgaGAAAAAGTTTTGCGTGCATACGTAAGTGCAGGCATAGCAGTGTGTAcgtttgtaggtgtgtgtgagtctgttaAAGAAAGGTGCATGTGTGGATTTTTGAAGGCATGGCAGGAGATATGTaagtgttttctctttttttctgtttctgtgttgaaGGTCCTGCTGCCTCTTGGCCTGATTTTgatatgtgcagtgtgtgttttttgtttctttcctgGAGTTTCATGTCCAGGAGAGAGTGCCTTACACAGTATAGGAACAGCTCTTATtgtatactgtatttatatattcaaaCCAACTAACTCCCAGATTTACAAGTCATTCCCGGTGCTTTGTGCGATACCCATTTAAACACACTCAGGGCCAGGGAGCTGCTCTGACTTGCCCCTGTTTGAACACTAGCCTTGAGCGTGTTCACCATTAGGCTCTCATTCATACAATGACAGTTGCAGACTAAAATTGGCCAGTGGCCTTTCCACACAAAGTTGGCATTGTCCTGTGCGTTGTAAATACTACTGATTGCATCATGCAAAGACAACTTTATGAAACTCTTCATCTTAGTTCTTGCTTTCGTGTTCACCagtcacaaaacacacaaacctaTTGAAGATGTTACATGGACTGACCTGACAGCACCTTGTTCTCTCACAAGGCACGTTCACAAATATCCCGTTGATTATGCTGTGCATTAGCCTCGCTGTGTATTTGCTCTGCAAACGTGCAGGAGAATCGGAGTGGAAATGAGATACGTACATGATGAAAGGAAAAACCCACGTCAATAGAAATCAATTGTGTCTTGTGTTTACTATATATGCCATGAATAACAGATGGGTGACAAATTGAAGGGAAATCAGCATAAAATGTCTTAGTAAGGCGTTGGGCCACAAAGTGAGAGTCTTCAGAGGGCTTCATTGCATATTATATAAGTCTCTACTGGAGGGATAAACACCTAAAGTTATTCCCTTTTTTGAGGTTTTGAACCCACGTTTTTTCCTTTTGTCACCCGTCTGTACATCCAGTTCTAAATTAATACACTTGAGATTTCTGATATTACTGTTAAAAATTGTAAGTATCCTGAATGCATAATGAGGCTTTGCTGGCAGATGTGGAATATTGACTGTTGGGTGTTTTATgattaaaagtattttgaaaccATC
>XM_039810760.1
atcacacTCCTCCTTCAGTCCTTCCAGCCACGCACACACTGGCAGGGCAGCTGTCTGCATTGGGTTGTACAGTAGCCTATGCTGCCTGGGATTGTTTTGAAACTACCTTTCCTTAAAGTCTGGCATCGGACGGTGAacgagggagaaagagagagtccgagaagagacgagacgagatttGTTTTGGTAATCTTCTTACTGTGTAGCCGGAGGACAGAGATGATGGGGACCAAAGTGTGGATTGCGCTTTGTGCGCTGCTACTCATTAACTCGGGATCCGCTGATCAAAATACCAAGACCCACTCTCCCTCAGAGGCTGCCCTTCCTGAAACCAATGTGACTATACAGCCTTCAGTCCCTCCTGAGAGCCACGCCCCGGCCACTGACACCCCCCTTACCCCCACCGCCGCCGTCCCCGCACCCACAACTCACCCTACCACTGTGGACACACCGACCACCACGCCACCCACAACACATCCTGCTGCACTTCCACCTGACTCCAGTACCCCATCAAACCAGCCCACTCACAACGTAACACACCCATCCACTCCTGTCCCAACGCCAAAGCCTGAAACTACCACGACCACTGTCGTCGCCCAGGCCAGTTCAACATCCAGCACCAGCTCCTCTCAAAAGCCCCCGAATTCTGAGTCGCCGACGCTGACATCTCCACGACACACTTCGCAGTCCGACGGGCATCCTGAGACCTCCAGCGAAGCCCACCTAAAGTCCACCATCAACCCGCCGAGCAGCCCCTCCGCGCAGGCCAATCCCCGTGCTGAAACCCCCTCCCAGCTCAACGTTGGGGGAGACCCGACGATGGTCCATGACTCGCCCACATTAGACCCCCTCCTGGCTGGCCTGGTGTCAGCCTTCATCATCACTGCTGTCATCATCactctgctcctcttcctcaaaCTGCGCCAGAGAGACAACAGACCAGAGTTCCGCAGGCTGCAGGACCTACCTATGGACGATATGATGGAGGACACACCCTTGTCCATGTACAGCTACTGATGGAGGCATGACTGAAAAATGTTGGCGACCAAATACTCtccttgaatccaggctgatgcTGCAGCGGTTGCCGAACTTTCCTTAATCTGCACCAAACAGAAAGAATCCTGGGTAGGTGTGAGCAAACATCTGGATCGCTTCCATTTTCCTAGCTCCCACTGACATGTAGGAAAAAGGACATGACTGAATGGACAATAAAGATATGGCCCATGTTGGGGtcgttttcttttttgcaaaaGTCCATTTTGGTGCCTGTAATTACAAATTAGGCCCACGCCTCTGTTGAATACTGTATGCTTAATATTTTTCAGCCCATGTTTTGGGGTGTGGGAGTTGTATAATATATTTGGATTTCCCTAGCGTTGAAAAGGGTCGGTTTGAAACACACCTGGACACAGATTCAGCCTGTCCTGCTAGACTCTTACCTGAGGGCACTCGTCTAATTAGTGTTAAAAAGTCTGGCACCCTAAGAGGCCAGATAAAAGAAATGAACATAAGAAATGGCCTGATTATAGTGTTAAAAAAGTTGCACTTTACTTTTTCAGCAGTGGAAAGAAATGGAcaaatatgtttgtgtatgaGAAAAAGTTTTGCGTGCATACGTAAGTGCAGGCATAGCAGTGTGTAcgtttgtaggtgtgtgtgagtctgttaAAGAAAGGTGCATGTGTGGATTTTTGAAGGCATGGCAGGAGATATGTaagtgttttctctttttttctgtttctgtgttgaaGGTCCTGCTGCCTCTTGGCCTGATTTTgatatgtgcagtgtgtgttttttgtttctttcctgGAGTTTCATGTCCAGGAGAGAGTGCCTTACACAGTATAGGAACAGCTCTTATtgtatactgtatttatatattcaaaCCAACTAACTCCCAGATTTACAAGTCATTCCCGGTGCTTTGTGCGATACCCATTTAAACACACTCAGGGCCAGGGAGCTGCTCTGACTTGCCCCTGTTTGAACACTAGCCTTGAGCGTGTTCACCATTAGGCTCTCATTCATACAATGACAGTTGCAGACTAAAATTGGCCAGTGGCCTTTCCACACAAAGTTGGCATTGTCCTGTGCGTTGTAAATACTACTGATTGCATCATGCAAAGACAACTTTATGAAACTCTTCATCTTAGTTCTTGCTTTCGTGTTCACCagtcacaaaacacacaaacctaTTGAAGATGTTACATGGACTGACCTGACAGCACCTTGTTCTCTCACAAGGCACGTTCACAAATATCCCGTTGATTATGCTGTGCATTAGCCTCGCTGTGTATTTGCTCTGCAAACGTGCAGGAGAATCGGAGTGGAAATGAGATACGTACATGATGAAAGGAAAAACCCACGTCAATAGAAATCAATTGTGTCTTGTGTTTACTATATATGCCATGAATAACAGATGGGTGACAAATTGAAGGGAAATCAGCATAAAATGTCTTAGTAAGGCGTTGGGCCACAAAGTGAGAGTCTTCAGAGGGCTTCATTGCATATTATATAAGTCTCTACTGGAGGGATAAACACCTAAAGTTATTCCCTTTTTTGAGGTTTTGAACCCACGTTTTTTCCTTTTGTCACCCGTCTGTACATCCAGTTCTAAATTAATACACTTGAGATTTCTGATATTACTGTTAAAAATTGTAAGTATCCTGAATGCATAATGAGGCTTTGCTGGCAGATGTGGAATATTGACTGTTGGGTGTTTTATgattaaaagtattttgaaaccATC

Function


NR:

description
PREDICTED: cell wall protein DAN4-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039810759.1 True 2971 mRNA 0.47 5 28639746 28649744
XM_039810760.1 False 2755 mRNA 0.47 4 28639746 28649744

Neighbor


gene id symbol gene type direction distance location
si:dkey-183n20.15 LOC104925996,LOC104959169,LOC100703951,LOC102207780,LOC101477488 coding upstream 54396 28577592 ~ 28585350 (+)
LOC120564927 LOC103354187,LOC101478050 coding upstream 74497 28552630 ~ 28565249 (+)
LOC120564926 NA coding upstream 116122 28521773 ~ 28523624 (+)
LOC120565126 LOC104959127 coding upstream 260715 28373583 ~ 28379031 (+)
LOC120565127 LOC101485093,LOC102207510 coding upstream 285990 28346415 ~ 28353756 (+)
mmachc mmachc coding downstream 10194 28659938 ~ 28663278 (+)
echdc2 echdc2 coding downstream 97245 28746989 ~ 28755022 (+)
fam20b fam20b,LOC102783880 coding downstream 215899 28865643 ~ 28887058 (+)
agxta agxt,LOC102212595,LOC102798621 coding downstream 303631 28953375 ~ 28959096 (+)
dtymk dtymk coding downstream 309410 28959154 ~ 28966583 (+)
G99007 hook1,LOC102781169,LOC106584290 non-coding upstream 68888 28569648 ~ 28570858 (+)
LOC120565132 NA non-coding upstream 179536 28449543 ~ 28460210 (+)
G98972 NA non-coding upstream 320858 28312594 ~ 28318888 (+)
G98770 LOC104966597,LOC101073477 non-coding upstream 757435 27879317 ~ 27882311 (+)
G98766 hapln4 non-coding upstream 780623 27855676 ~ 27859123 (+)
G99108 NA non-coding downstream 38138 28687882 ~ 28688118 (+)
G99189 NA non-coding downstream 320743 28970487 ~ 28972086 (+)
LOC120566147 NA non-coding downstream 342484 28992228 ~ 28992610 (+)
G99217 NA non-coding downstream 369791 29019535 ~ 29034406 (+)
G99238 NA non-coding downstream 506940 29156684 ~ 29157107 (+)
LOC120564865 NA other upstream 493421 28137269 ~ 28146325 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other upstream 555359 28027964 ~ 28084387 (+)
ncanb ncan,LOC104966594,LOC107554802 other upstream 806891 27659696 ~ 27832855 (+)
si:ch211-212d10.2 LOC103371119,LOC104950605,LOC100693321,LOC101487565,LOC102778050 other upstream 1262692 27372809 ~ 27377054 (+)
micos13 LOC104918748,LOC103371279,LOC104964520,LOC106536194 other upstream 1843459 26791729 ~ 26796287 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other downstream 122618 28772362 ~ 28774553 (+)
ralgps2 ralgps2 other downstream 125631 28775375 ~ 28865487 (+)
G99297 NA other downstream 1013889 29663633 ~ 29665090 (+)
si:ch73-389b16.1 ccdc18 other downstream 1777759 30427503 ~ 30429291 (+)
G99545 NA other downstream 2160774 30810518 ~ 30811236 (+)

Expression



Co-expression Network