fbxl5 (fbxl5)


Basic Information

Item Value
gene id fbxl5
gene name fbxl5
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 39202848 ~ 39211764 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810865.1
TGTATCTGCGACTGTGCAGATGACGCACTGAGGTTCAGTGTGGAAAGATGGCTCCTTTTCCGGACGAGGTGGATGTTTTTACTGGCCCACACTGGCGAATGAAGCAGTTGGTGGGCCTATACTGCGAAAAGctgTCAAAAACCAACTTCTCCAACAACAATGATTTCCGCTCATTTCTTCAGTCGCTGTGCGCCACCTTCAAGGAGTTCAAGATGCATGAACAAATTGAGAATGAGTACATCATCGGCCTGTTGCAACAGCGCTGCTGCACTGTGTACAATGTGCACTCTGACAACAAACTCTCAGAGATGTTGTCCCTCTTTGAAAAAGGGTTGCACAACGTTAAGAGTGAATATGAGCAGCTTAACTATGCCCAGCAGCTGAAGGAGAGACTAGAAGCTTTCACACAAGACTTTCTGCCCCACatgaaggaagaagaagagGTGTTTCAGCCTATGCTTATGCAGTACTTCACCTACGAGGAGCTCAAGGACATCAAGAAGCAGGTGATAGCACAACACTGCAGCCAGCACCAATGGGACTGTGCCGCCGAGGTGCTGAAGGGCTTCAGTTTGTGGAGCCAGGCAGAGGAGCTGCAAAAGGCCTTTAAATATGCCGACCACGAGAAGACAGATTATGAACTGGAAAAGAACAGGAATTCTTCAACCCACATCTCCCAGCTTCCTACCGAAATTATGCTGAGGCTCTTCCACTATTTGGACCCTGAAGATCTGTGTCGCTGTAGTCAAGTGTGCAGCTCTTGGTCAGAGCTGGCTAAGTCTGGCTCTCTGTGGAGGCACCTCTACCCTGTGCGCTGGGCCAGAGGTGATTTTTATAGTGGCCCCCCTGGGGATCTGGACCAGGAGCCAGATGATGAGTGGGTGAAGAGTCGGCAGAATGAGGGCCGGGCCTATCAGAAATGGGATGAGGATGCTGATGTTGATGAGTCTGATGTGTCGGACCATACACAGGGCTCCCTGGCAATTAACACTGCTCAGCGAGAGAAGAGGCTTCTGCATGGGATTATCCAGAACCTCCTGCCATCTGTGGGTCCGTCCGTCAGGTCCATTGTTTTGGCGTACAGTTCTACAGTCTCTAGTAAAATGGTGCGCCAGATTCTCAGTTTCTGCCCCAATATTACTCACCTGGACCTGACCCAGACTAATGTTACAGATAGTGCATTTGACAGCTGGGCGTCTCTCGGGGCTTGTCTCTCTCTGGAGCACCTGGATTTGTCGGGGTGTGAAAAGATTACTGATCACACCATGAAGAAACTGTCAGTTGGGCTGGGTGACCTCACATCCTCCACCTGCTTTGACAAACGTTTGGACCGACGGGCCAAGCTTCTTAAAAGTTCCTCAATACCTATCACACTGGTGGAAGAGAGGAACCTTTATCCAGTGGGACGAAAGCGGCAGGCCATCATTTTTAAGCCGGGAACTGGCGTTGGGCGCTGCGCCTGCACCCCCACGCCAGTGTGGGTCCTGGACCCCTCAGACCTTGCTGATATTGAAGACGCTGCAGATTGGAGCCGCCGCGGTGGGGTGTCTCTTCCTGAAGCAGAAAGCCTTGTAGAGACACAGCTTGCGGGAAGCTCGTGCTGTtgcaggaggagcaggaggcgcGGGCACAGGACTGGCTCAAATGCCTCCTATTTGCATCAGCAGTATGCAATGTCTGGGGAAATGTTTTGTGGTCACTCCACCTGCTGCACGACTAGTGACATGGCCCTCAGGACTTTTACTGGGCCTCAGTGCGAGTCGGGCACCACCAGGAGCAGCACTGCAGAGTTTCGGACTAAATGCTCCTCATTTGGGGGGCTGCAGTGCTTGGGGCGTCAAAACAGGACTGACCAGTCAGCGGCAAAACGCTCACTGAGGTTTCTCAGCCTTTCTGGATGCTATCAAGTCACAGATTTGGGCTTAAGGGCTCTGTCACAGCGTGGAGGGCTTCCTTTCCTGGAGCATCTCAACCTGTCTGGCTGCCTCCTCATCACTGAGGTGGGGCTGCAGGAACTGGTGTCAGCCTGTCCTTCCCTCAATGATGAGCACTTCTATTACTGCGACAACATCAACGGTCCTCACGCAGACACGGCCAGCGGCTGCCAGAACCTGCAGTGTGGCTTCAGGGCCTGCTGTCGCTCCGGAGAGTGATCCCGCCAAGCAACACCTTTCGTAAAATGTCACATCTCCTTTTAATTGCACTTTATCCTGGGAATACCAGttgctgtgttttgtgtcaCTTCAAAAGTGTTTCTGGACAAAATTAAGTTTGTTCCCGttatttccatttccatttccatctatattaaatggaaatattccttaagaaaaggaaaatataaAGGGGTGAAAATGGATTTGAAGTTGTTGTACATTCTGTTTCcggttttggtttaaaaaaaataaaattaactaAAGACGCGTAAACACCAAGGCACCAAACATGTTTCTTTTGTCACTAAAACTATACTGATTTATATAAGTCTTCTTCTGCCCCTGTTGTGTTTTAGTTGATCTATTTCTAATCAGCATAGTGTAGACTGACATCAGCATCAATTAAACAAGCTGTCATTTGTTGGAGATGGTGACGAACAATTAATCAGGAGTGACTTTATTGCTGCTCCGCCTTAGATTGAAGCTGTCATTTTGTTGACCGTTACAGGTCAGAATGATTAGTCCCACTGTACATGTGTTTTCTGTTGATGTTGCCACAGTAGCCATTTAATTACACCAGGCATAAGACACCAGTAAAGGATGTACAGAGATAGGAATTGGTACATGATGTTGCAGTGTAGTCTTAACCTTTTTGTTCCACATACCAGATGTTCATaggcaccaaaaaaaaaagctcttggcttttatttttctttatgcaCTCCAATGTTGTGGGAAACAATGGACCAATGTTCATATAAGAAGGATTTTTAGCTGAAAGAGGATTAGGAATATTACCCTTAGATTGGTAGTCTACTGTGTTCTGTTTTCAGTAGATTGTACTTCATCTTTAATCGTTATGCTGCAGGatgatttttttctctcaaagtCTTGCATGAGGAGTTCCATTGAAAATGTTCAATTCATAAACAGAATAATAAAGGTATCTTGGAGTTAAAAGCTCTGTTggtcattttaattaattttgtgaACACAAAGTAAAAATTGAAACTCTTGCAAGTGGGATATACtcaacataataaataaaacggtAGGAAACTTGTATACTGAGCTACCAGTTAATGACATTTGTACATTCTAATGCAATCCAACAGCCctgcaataaatatttttgtgaaGTCTTTGA

Function

symbol description
fbxl5 Predicted to enable iron ion binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; iron ion homeostasis; and protein ubiquitination. Predicted to be located in perinuclear region of cytoplasm. Predicted to be part of SCF ubiquitin ligase complex. Orthologous to human FBXL5 (F-box and leucine rich repeat protein 5).

NR:

description
PREDICTED: F-box/LRR-repeat protein 5

GO: NA

KEGG:

id description
K10271 FBXL5; F-box and leucine-rich repeat protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810865.1 True 3303 mRNA 0.46 12 39202848 39211764

Neighbor

gene id symbol gene type direction distance location
palld palld,LOC102787062 coding upstream 72008 39075297 ~ 39130840 (+)
fryl fryl coding upstream 188068 38951570 ~ 39014780 (+)
LOC120564938 NA coding upstream 281837 38907586 ~ 38921011 (+)
sgcb sgcb coding upstream 295481 38901833 ~ 38907367 (+)
scfd2 scfd2 coding upstream 360177 38719919 ~ 38842671 (+)
ndnf ndnf coding downstream 83572 39295336 ~ 39306238 (+)
slc34a2b LOC106512275,LOC107396065,LOC108240151 coding downstream 267089 39478853 ~ 39487478 (+)
LOC120564940 LOC106537324 coding downstream 300946 39512710 ~ 39513658 (+)
LOC120564941 LOC100699266,LOC102791790,LOC102212335,LOC102290083,LOC101480793 coding downstream 305109 39516873 ~ 39544466 (+)
nhsa LOC103369891 coding downstream 385940 39597704 ~ 39661492 (+)
G101437 NA non-coding upstream 12067 39190066 ~ 39190781 (+)
G101427 NA non-coding upstream 24102 39178244 ~ 39178746 (+)
G101364 NA non-coding upstream 179268 39018380 ~ 39023580 (+)
G101365 NA non-coding upstream 185175 39016711 ~ 39017673 (+)
LOC120565971 NA non-coding upstream 259636 38936151 ~ 38943212 (+)
G101464 NA non-coding downstream 66888 39278652 ~ 39278953 (+)
G101484 NA non-coding downstream 225890 39437654 ~ 39438065 (+)
G101519 LOC103356959,LOC104928288 non-coding downstream 468314 39680078 ~ 39680526 (+)
G101579 NA non-coding downstream 659892 39871656 ~ 39872173 (+)
G101600 NA non-coding downstream 693272 39905036 ~ 39908510 (+)
usp46 usp46 other upstream 322243 38866435 ~ 38880605 (+)
G100843 NA other upstream 1712776 37463914 ~ 37490072 (+)
prrc2c NA other upstream 2244488 36932655 ~ 36958360 (+)
G100671 NA other upstream 2503979 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 2591102 36596041 ~ 36611746 (+)
prdm5 prdm5 other downstream 111820 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 242356 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 349297 39561061 ~ 39592762 (+)
LOC120565298 cdkl5,LOC103356958 other downstream 482148 39693912 ~ 39740277 (+)
atp10a atp10a other downstream 1303329 40515093 ~ 40559895 (+)

Expression


Co-expression Network