cldn34a


Basic Information

Item Value
gene id cldn34a
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 39816828 ~ 39823367 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810935.1
GGTTAAGACTTTGGAGTATCTTTATTAGTCAGGTGTTAACAGCTTTTCTCTCACATAACCAAAGCAAAATGTAGACTATCCCTCCGGTTCATTCTCCTGTGATAAATAAAGCACCTGTGGAAGGGGGATTCAGTTTATATTTGGAACATCACATCGAAACTTAAGACTTGTCGAGGTGAGTGACAGGACAAAGGCCTTTTATTTCACTGCATAACACGAAGGATTTAAATGGACAATCATTAACTCCAGTAATGCTTTCACAGACTGTACCTACAGGCTTTCTCCTCACTTTGACTGCTGCCTTGAGGAGTTTGATTCTACTACCTCTCAACATAATTGatcaaaatttcaatttccaTTTTGGATGGTATTGAAGTTTATTCTAAAACTTGCCAAGGAGGTGCGATGGCTGTCAGGCACACTGTGTGAATTCAACAATGTGTTGGCTCAGCGGTCCGTCTCTCTGACCTTTAGCAATCACACCGGGCAGGATGGTTTACCTGGCTCACACAGCTCACCGGCAGTTCCTGGGCCTGATGGCCGGGGTCATGGCCTGGATCCTCATCATGACCACAACCGGCCTCAACGAGTGGCGGCTGTGGTACGTGGCCGATGAGTCCGTCATCACCTCGGGCGTGGCCTGGGTGGGCATCTGGAGGGCGTGTTTCTACAGTCATGTCCTTCCCAGGATAGAGAACTGTCAGAGCATCGGCATCTCGGACCCCTTTGCTCCTGCAGAGATCCCTGTGGCTCAGGTGCTGATGGTGCTGGCGCTGATCTGCGGCCTGGTGGGGAACATCACCGCTGCAGTGGCTGTGAGGATGGTCTACTTCTCTATAGAGAATCGTAGGAACATAAGGCTGGTCTTTGTGCTGGCAGGGACCCTGTATGTGCTGACTGGGACGTTGTCATTGGTGCCGTTGATGTGGAACATGAGCTCTGTGCTTAAAAACAGCACCATAGGCTTTCCTCCTGAGTTCCACCTCCCCGCAGCTCCTGTCAGGCAGCAAGTCGGCTCGGCCATCGGAGTGGGCATCTTCGCCTCCATCCTGATGCTCATAAGCGGGGCGCTTCTCCTCTGCTACCGCTACGCCTGGGCGGCCCTCAGCACAAAGGCCCCCAGAGACACCCGGGATCCGCTCCAAGGTCCCTGGACAGAAACAACCCTAGCGCAGAAGTCTGAATTCCTAGATGGAACCAACCAAGGCAGGGATAATCCTGCATTTCACAGAGAAGAAATCTCATGATGGCAAAACATCAGAACACTTCATTTACAATCTTGGATTTGGATCTTTTTAATCAATGGGAAAGTGACTTAGACAGTGTCATTGGGGAAAAGTTTAAAGATTTCAAGCCGAGTGCTGCTCACAACATTTCTTAATGACTAAAGACTTACAGAATGAGTTTAGCCTTTCTTGTGGAACATCAACCATGTTATATTACAAGAAACACTGTGGTATTGATTATATAGCTGCTTTAATATTCTACGTTAATACAGCATGTTATGTATGATATGCCCGCTGGCTTGTGTAAAGTGAAGCTCTCTTGGATTTGTGTTGCCAGAGTTCAGGGACGGACGCATATCTGCAGATGTTATCATAAACTTTATCTCTCCAGTGTTATCCAATAGTGCTGTTTGGAGTGAGCGATCTGAGCGTCTCTGTAATGACTGGGGGAGgtgacatgacatgacatgcCAAGGTGTGGGCTTCTAACGGGGCCCCATGTGAGGAAGGATCTTAGAGGGTCAAGTTGACTGGGGGCCCTGCTCATGTGACCTGGGTAGGAGGCTGACGAGAGCAGGCATGTGAGTCTGGAGAGGGGGCCGCCTCACAGTAGTGATTGTTGCCagggaagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactgcacctcTCTGGAGGAGGAACAAAAGGCCCTCTTCAGCTGAGTACAGCTCTCTGTCAAAAACACAAGTCCCAGAAGTGGATGAAAGGTAGCTGTGACCACTCGTGCAACATGGTGAGGTGCTCCATCACAGACTTGATGCCAGTAATCTGTAATAGGAGAACCACTGATATTAATTTAATTGAGTATAACCAGTATTCACATTCCTCTAGATAAGAGATTTTGGGAAAGTATTTAAATcattctttgtctctgtcttcaTCCACCCTCCCACCTCTCTCTTGCACATTCCCCTCTATAGATAAGCCTGACATAATCGCCTGAGCTGGTTATGTTTTATCTAATCTGTTATTCTAAGTCATATACTCTATCAGTTATAATAATTAATGGAGGAAAACTCATAAGAAGGCTctgagagaggaaggaaggtgATCAGTGCAATTAAAAACCCTCATGTCAAAGTATGTTGCCAAACGTACCATAGGTTTACAAAGATGGCATTTTATTTGCAGTTAACTAGATTCAAGAGAGATGACTGGGGGGGGTAAAGCTCCAAGCAGATGAGCAATTATGTTCTTTTATCTTCTTCAGAGATTCCTGCATCGGATGAACATTATTATAGCCAGGGCCATCTCCATGTAAGTAACTACAGTCATCTGAAAGATatagttactggttacttttcagatttgccataaaaaagaaagacatttatGATACGTTTTTTTCGTATTGTGCTTGTGACAAAAAAAGCAGTGCCTAGTTAGGACCCCTTGTTACAGATAAGTGTTTTATCAAAGCGTGATTTCCTctcttaaaggggaactccaccgattttacacatcaaagtctgtttacaggtgtTACACCTGTGTACCTTTGTGGCTTCAGGGGGAGCTGCGCCAAAGCTGTtaaattgcctcaagtgatgtcacttgcgTCAGCGTCGGCTGGAGCTGAAAACAAgtttataaatgaaataaatctggaggtgtggagttagaaagaagtggtGTAACCAGACATCCGTAGTCCGCTCCTAATCTCTGCTAGAGGCTAGCAGCTCAAGGCTACATTAGCCACAACTAGCATAACACACCTAAATGTCCAGGCTGAGCTTTTGGAAGTTAATGTAGGCGCCAGGTTTTGATAAGGAAAGAATGCATAGAACAAAAAAGACGACATCACTGCTTCTGCTGCAATGAttttgatcctttttttaaCCGTCCATCCTGAGTCCGACATGGTTATAGGACTGCAATGCTTAACCCGTAGAGAGAGCTCTTTTAAATTCTCAGATGGTTTCATTAAGATAGCTGTTCAAGGCTCATTTCCTCTCCCATTAATCATCTCACAACCCCAAAGATTTATCTTGCGACCCTCTAAAGCAGACCACGCCCTGGGGGCCATTTTTCTGTACTTATCAAaaggacttttacttttgatactttcagtacatttagctgaaaataaaggaacattATCATGATGGTTTATTTGTTCTGAGTATTGAGTACTGATTTCACAAAACTGCAATTCTTAACATGTTGCACTGACATCATATCTGATCAAAGTTTCTCCATGTACATCTGAACAGTCAGTGTAGAAAGTCACGTTACATGTAACAATGGGACAAAGTTGTACCTTTTCTAGAGGTACTTTGTTGTGCCTTTGTTTAAGGTACATTATTGATCCTCAAAAGTATAATAGTGTCCCTTTAGAAGGTACAAACAAGTAAGGTACAATTTTGTTCCATTGACTAAAGGTACAACAATGTACTTTTGAGGGTACCACCCCAGTGACACGCTTTTGTTCCTTAAAGGTActgttttgtacttttttcctTTGTGCTGTGAGAAGTTTgcttatcaatttttttttctggtttgcAGTCGGATGCATTTAAACATAATTAGTAGGCGACATGTCATTTCCTTAATGTTGCTGCACTGCCCGGCCCTAAAGCAAATGGAGTCTTACGGTAATCAAGGAGAACATCTCTGCAGTTGTTTTTCGCTGCCTCCCCTGCTGATAGCTGCTCTCACACTGGGAGACACCAGGCCCTCCCCTACAGCCTGCGTGGCGTCAGAGGATAGGAGGGTGCCTCTCGATACTCTCCATGTTCTCTGGCTCTGTGAGGCCTGGCTGGCAGAACCACTTTTTCTATCCTCAAAAGCAAAGTCTGTCATGTCTCGGCCCCCATATGCTTCTGTGACATCATTATCCCTTATTAACTTCATTCTATACACAAAAAGTACAATCATTAGAATGTGGAGGTTTAAAAGTCATACTTCTCCCATGCAATAACACATTT
>XM_039810936.1
GGTTAAGACTTTGGAGTATCTTTATTAGTCAGGTGTTAACAGCTTTTCTCTCACATAACCAAAGCAAAATGTAGACTATCCCTCCGGTTCATTCTCCTGTGATAAATAAAGCACCTGTGGAAGGGGGATTCAGTTTATATTTGGAACATCACATCGAAACTTAAGACTTGTCGAGGAGGTGCGATGGCTGTCAGGCACACTGTGTGAATTCAACAATGTGTTGGCTCAGCGGTCCGTCTCTCTGACCTTTAGCAATCACACCGGGCAGGATGGTTTACCTGGCTCACACAGCTCACCGGCAGTTCCTGGGCCTGATGGCCGGGGTCATGGCCTGGATCCTCATCATGACCACAACCGGCCTCAACGAGTGGCGGCTGTGGTACGTGGCCGATGAGTCCGTCATCACCTCGGGCGTGGCCTGGGTGGGCATCTGGAGGGCGTGTTTCTACAGTCATGTCCTTCCCAGGATAGAGAACTGTCAGAGCATCGGCATCTCGGACCCCTTTGCTCCTGCAGAGATCCCTGTGGCTCAGGTGCTGATGGTGCTGGCGCTGATCTGCGGCCTGGTGGGGAACATCACCGCTGCAGTGGCTGTGAGGATGGTCTACTTCTCTATAGAGAATCGTAGGAACATAAGGCTGGTCTTTGTGCTGGCAGGGACCCTGTATGTGCTGACTGGGACGTTGTCATTGGTGCCGTTGATGTGGAACATGAGCTCTGTGCTTAAAAACAGCACCATAGGCTTTCCTCCTGAGTTCCACCTCCCCGCAGCTCCTGTCAGGCAGCAAGTCGGCTCGGCCATCGGAGTGGGCATCTTCGCCTCCATCCTGATGCTCATAAGCGGGGCGCTTCTCCTCTGCTACCGCTACGCCTGGGCGGCCCTCAGCACAAAGGCCCCCAGAGACACCCGGGATCCGCTCCAAGGTCCCTGGACAGAAACAACCCTAGCGCAGAAGTCTGAATTCCTAGATGGAACCAACCAAGGCAGGGATAATCCTGCATTTCACAGAGAAGAAATCTCATGATGGCAAAACATCAGAACACTTCATTTACAATCTTGGATTTGGATCTTTTTAATCAATGGGAAAGTGACTTAGACAGTGTCATTGGGGAAAAGTTTAAAGATTTCAAGCCGAGTGCTGCTCACAACATTTCTTAATGACTAAAGACTTACAGAATGAGTTTAGCCTTTCTTGTGGAACATCAACCATGTTATATTACAAGAAACACTGTGGTATTGATTATATAGCTGCTTTAATATTCTACGTTAATACAGCATGTTATGTATGATATGCCCGCTGGCTTGTGTAAAGTGAAGCTCTCTTGGATTTGTGTTGCCAGAGTTCAGGGACGGACGCATATCTGCAGATGTTATCATAAACTTTATCTCTCCAGTGTTATCCAATAGTGCTGTTTGGAGTGAGCGATCTGAGCGTCTCTGTAATGACTGGGGGAGgtgacatgacatgacatgcCAAGGTGTGGGCTTCTAACGGGGCCCCATGTGAGGAAGGATCTTAGAGGGTCAAGTTGACTGGGGGCCCTGCTCATGTGACCTGGGTAGGAGGCTGACGAGAGCAGGCATGTGAGTCTGGAGAGGGGGCCGCCTCACAGTAGTGATTGTTGCCagggaagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactgcacctcTCTGGAGGAGGAACAAAAGGCCCTCTTCAGCTGAGTACAGCTCTCTGTCAAAAACACAAGTCCCAGAAGTGGATGAAAGGTAGCTGTGACCACTCGTGCAACATGGTGAGGTGCTCCATCACAGACTTGATGCCAGTAATCTGTAATAGGAGAACCACTGATATTAATTTAATTGAGTATAACCAGTATTCACATTCCTCTAGATAAGAGATTTTGGGAAAGTATTTAAATcattctttgtctctgtcttcaTCCACCCTCCCACCTCTCTCTTGCACATTCCCCTCTATAGATAAGCCTGACATAATCGCCTGAGCTGGTTATGTTTTATCTAATCTGTTATTCTAAGTCATATACTCTATCAGTTATAATAATTAATGGAGGAAAACTCATAAGAAGGCTctgagagaggaaggaaggtgATCAGTGCAATTAAAAACCCTCATGTCAAAGTATGTTGCCAAACGTACCATAGGTTTACAAAGATGGCATTTTATTTGCAGTTAACTAGATTCAAGAGAGATGACTGGGGGGGGTAAAGCTCCAAGCAGATGAGCAATTATGTTCTTTTATCTTCTTCAGAGATTCCTGCATCGGATGAACATTATTATAGCCAGGGCCATCTCCATGTAAGTAACTACAGTCATCTGAAAGATatagttactggttacttttcagatttgccataaaaaagaaagacatttatGATACGTTTTTTTCGTATTGTGCTTGTGACAAAAAAAGCAGTGCCTAGTTAGGACCCCTTGTTACAGATAAGTGTTTTATCAAAGCGTGATTTCCTctcttaaaggggaactccaccgattttacacatcaaagtctgtttacaggtgtTACACCTGTGTACCTTTGTGGCTTCAGGGGGAGCTGCGCCAAAGCTGTtaaattgcctcaagtgatgtcacttgcgTCAGCGTCGGCTGGAGCTGAAAACAAgtttataaatgaaataaatctggaggtgtggagttagaaagaagtggtGTAACCAGACATCCGTAGTCCGCTCCTAATCTCTGCTAGAGGCTAGCAGCTCAAGGCTACATTAGCCACAACTAGCATAACACACCTAAATGTCCAGGCTGAGCTTTTGGAAGTTAATGTAGGCGCCAGGTTTTGATAAGGAAAGAATGCATAGAACAAAAAAGACGACATCACTGCTTCTGCTGCAATGAttttgatcctttttttaaCCGTCCATCCTGAGTCCGACATGGTTATAGGACTGCAATGCTTAACCCGTAGAGAGAGCTCTTTTAAATTCTCAGATGGTTTCATTAAGATAGCTGTTCAAGGCTCATTTCCTCTCCCATTAATCATCTCACAACCCCAAAGATTTATCTTGCGACCCTCTAAAGCAGACCACGCCCTGGGGGCCATTTTTCTGTACTTATCAAaaggacttttacttttgatactttcagtacatttagctgaaaataaaggaacattATCATGATGGTTTATTTGTTCTGAGTATTGAGTACTGATTTCACAAAACTGCAATTCTTAACATGTTGCACTGACATCATATCTGATCAAAGTTTCTCCATGTACATCTGAACAGTCAGTGTAGAAAGTCACGTTACATGTAACAATGGGACAAAGTTGTACCTTTTCTAGAGGTACTTTGTTGTGCCTTTGTTTAAGGTACATTATTGATCCTCAAAAGTATAATAGTGTCCCTTTAGAAGGTACAAACAAGTAAGGTACAATTTTGTTCCATTGACTAAAGGTACAACAATGTACTTTTGAGGGTACCACCCCAGTGACACGCTTTTGTTCCTTAAAGGTActgttttgtacttttttcctTTGTGCTGTGAGAAGTTTgcttatcaatttttttttctggtttgcAGTCGGATGCATTTAAACATAATTAGTAGGCGACATGTCATTTCCTTAATGTTGCTGCACTGCCCGGCCCTAAAGCAAATGGAGTCTTACGGTAATCAAGGAGAACATCTCTGCAGTTGTTTTTCGCTGCCTCCCCTGCTGATAGCTGCTCTCACACTGGGAGACACCAGGCCCTCCCCTACAGCCTGCGTGGCGTCAGAGGATAGGAGGGTGCCTCTCGATACTCTCCATGTTCTCTGGCTCTGTGAGGCCTGGCTGGCAGAACCACTTTTTCTATCCTCAAAAGCAAAGTCTGTCATGTCTCGGCCCCCATATGCTTCTGTGACATCATTATCCCTTATTAACTTCATTCTATACACAAAAAGTACAATCATTAGAATGTGGAGGTTTAAAAGTCATACTTCTCCCATGCAATAACACATTT

Function

NR:

description
PREDICTED: claudin-34

GO:

id name namespace
GO:0030054 cell junction cellular_component
GO:0016020 membrane cellular_component

KEGG:

id description
K06087 CLDN; claudin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810935.1 True 4232 mRNA 0.45 2 39816828 39823367
XM_039810936.1 False 4010 mRNA 0.45 2 39816828 39823367

Neighbor

gene id symbol gene type direction distance location
shroom2a shroom2 coding upstream 112 39775793 ~ 39816716 (+)
LOC120565276 ap1s2,zgc:162858,LOC106942561,LOC107095773,LOC106921341,LOC103356955,LOC102795551,LOC101477195,LOC103463884,LOC102192022,LOC102311043 coding upstream 50649 39747748 ~ 39766179 (+)
LOC120566071 rai2 coding upstream 141268 39665221 ~ 39675560 (+)
nhsa LOC103369891 coding upstream 155336 39597704 ~ 39661492 (+)
LOC120564941 LOC100699266,LOC102791790,LOC102212335,LOC102290083,LOC101480793 coding upstream 272362 39516873 ~ 39544466 (+)
wwc3 wwc3 coding downstream 5589 39828956 ~ 39863261 (+)
tomm70a tomm70 coding downstream 88263 39911630 ~ 39920790 (+)
tbc1d23 tbc1d23 coding downstream 100191 39923558 ~ 39939407 (+)
nit2 nit2 coding downstream 122320 39945687 ~ 39954254 (+)
gtpbp6 gtpbp6,LOC103356937,LOC102777366 coding downstream 135691 39959058 ~ 39963536 (+)
G101519 LOC103356959,LOC104928288 non-coding upstream 136302 39680078 ~ 39680526 (+)
G101484 NA non-coding upstream 378763 39437654 ~ 39438065 (+)
G101464 NA non-coding upstream 537875 39278652 ~ 39278953 (+)
G101437 NA non-coding upstream 626047 39190066 ~ 39190781 (+)
G101427 NA non-coding upstream 638082 39178244 ~ 39178746 (+)
G101579 NA non-coding downstream 48289 39871656 ~ 39872173 (+)
G101600 NA non-coding downstream 81669 39905036 ~ 39908510 (+)
G101666 NA non-coding downstream 161103 39984470 ~ 40018693 (+)
G101674 rp2 non-coding downstream 177538 40000905 ~ 40003839 (+)
LOC120565265 NA non-coding downstream 220815 40044182 ~ 40045506 (+)
LOC120565298 cdkl5,LOC103356958 other upstream 76551 39693912 ~ 39740277 (+)
reps2 reps2,LOC102792668 other upstream 224066 39561061 ~ 39592762 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other upstream 352378 39454120 ~ 39464450 (+)
prdm5 prdm5 other upstream 455095 39323584 ~ 39361733 (+)
usp46 usp46 other upstream 936223 38866435 ~ 38880605 (+)
atp10a atp10a other downstream 691726 40515093 ~ 40559895 (+)
G102165 NA other downstream 1629307 41452674 ~ 41453306 (+)

Expression


Co-expression Network