LOC120565304 (b3gnt3)


Basic Information

Item Value
gene id LOC120565304
gene name b3gnt3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 16216296 ~ 16225462 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039810979.1
TTAAAACCACCTCCAGACTATCTGTAGCATCTCCAGTAATGTTTAATGCTCTGCATGAGCATGTATATTGCTCAATCTAGAGCAGAGTTGCACAATTCTGACTTCAGGATGACCAACAGACAACCAAAGTACTCTGGTGTGTGCTAACTTCAATGCCAGTGTTTGAACTGGGGCTTTCTAAAGTTAACTGTGGAGTTGGATGTTTGAGTTGGAGTGGATCAGGCACAGCAACTGCAACTACAAGATTTTCGAGGATGAGAAAGCTCAGAGCGAAAATCTTCTTGCTGGCGGGAGCTCTTGGTCTGTTGGCCCTCcatctttttaaagatttttttgacTACAAAACCGTCCGACTCCACGTAGATGTGATAGAGAATGACATTCAAGTAAGGCGACCCaccacaaaaaagtcatatgtaTACTCCTGgtcaaaatgtcaacaaaatgtGAGTGCTGCCAACATCACAGGCTTCAGCTCTCTTCCTGGTGACATAAAAGACTTTCTCTATTATCGACACTGTCGCCATTTCCCCATGCTGCTGGACCTTCCTGACAAATGTGGAGGAGCTGATAAATCTGCAGAAGTCTTTCTTTTCCTGGTCATTAAAAGTTCCCCTGTGAACTACGACCGCCGAGAGGTGCTGCGTAAAACCTGGGCTAAAGAGAGGTTACACAATGGTGTGTGGATCCGAAGGATCTTCATCTCAGGAACAATTGATACTGGTTTTGAGAAGGAGAGACTGAACAAACTACTCGAGCTGGAGAAACGTGAGTACAATGACATTCTCCAGTGGGACTTTAATGAAGGATTCTACAACCTCACCTTAAAGCAGATACTTTTCCTGGAATGGATGGAAAGGAGCTGTCCGAACGCTCGCTTCCTGCtaaatggtgatgatgatgtctttgccaacacaaacaacatggttGAGTATCTTCAGAGCCTCAAGGAAAATGATGGAAGCAAGCACCTCTTTACTGGACATCTGATCCAGAATGTAGGACCCATTAGAATATCACAGAGCAAATATTTTATCCCAGTTCAGGTGCAGGAGTCAGACTCATATCCTCCCTACTGTGGTGGTGGAGGCTTCCTACTGTCTGGCTATACAGCTTTGGTCATATACAATATGTCCCAGTCCATTCCCATTCTTCCCATTGATGATGTATACATGGGGATGTGTCTGGCCAAAGCAGGACTTGTTCCTGATTCTCATATGGGTGTGAAGACGGCAGGACTGCAGATTCCCTCCAGCACACTAGATGGATACGATCCTTGCTATTATAAAGAAGTTCTACTGGTACACAGATTCCTTCCAGCTCACATGTATCTCATGTGGCAGAGAATACATGATTCTAATCTGAAATGTGGGCCCTCCAAGTCAAGGCTTTAGCATCACAAAACTGTAACTTACATGTAGTGAGAGAGTTTGTTGGCAATTTGTTTCCTGCACCTGCTCTTAGGTTGTGAGTGCAGGTTTGACTCGCTTCATTTCATCATGAGAAAATCTTTGGACTGTTTTTCTACCACTGTTCGGCTGCAGGCTTCAGCACAGTTCAATGGAActtattattttattctttgtCATCAATGTGGGCGAGCAGCAGTCAGCCTGACTCAAAGGGGCACAGCAGTAGTTAGTGTAGGTGTATTGCCCACATACTGTGTGGGTGAGCAACTTTTACTGGAATTAAAAATAGGGTTGCTTGGTATCAGGCTTCAATGTTgtgggttttgtttttcttttctttgttggtACCAAATACTTCTACCTTCTTATTGTTTGATCAGATACTTACTGTTTAAATTATACTTTTATAAAGTAgctatactgtatttatgtaaacTTCTTGTACATCATTATCGAACCAATACCCAGCTGGTGTAAGTGATGCAGGGGGATAAGGTATGCTGTGGTGTCCACAGTCTTACACAAATATAATAAAACTCAGGTTTTCTTAAGACTAGTATGCAGTTTTctgtaatgaaataaaaaaatattaagtaTGCACCTGTATATTTGTGCTCAGAAAGATACTAATGTAGCCTATGTTTTTGTGCCTTAAATCAGTGCTTCTCTAACATATATCACTGGAATTTTGGATGTACTGTCAAATCCCCTTTATATTTATAAGTCAGTAAGAACCATTACAAGGGGTCTCAAATTTTCATGTAAGATTACTGTGTGCTTTCAGGACTTTGTATATTGAAATAAATTGATTACCATgtattttaccattagttaattGAATGTACTGAAATTCATTTTCCTGCTGCTAAGAAGAGGTAATATATTgtgtgattttaaaatgaatggctTTGAGGTTACTGTATATTGTGTACTGCATATAacaaatatgtatt
>XM_039810980.1
ctttttgaaaatggtcaTACTGTTATGTAGCAGGATGACAGGATAGTTATCATGTTCATCCCAGATACCAAACAGTCATTGAAACTATGTTAAATCAACATTCCGTTGTCAACATTAAGTCATTGAATCAACATCAAACTCTGATGTTGATTTAACATAGTTTCAATGACTATGACTATGACTTGCTATCTGGGGCCCATGCCATTCCAATGATTTAGCTTCTCATTGATGCCGTGCTTCAGACTGTGTTGCCCTATGGGGAACAAATAAAGGAGATGAGTTGACTCTATTGCGCTGTTTAAAGGAGCTTTTATAAAGGTAGGTCCTATAGCCTGCAGTGAATCAATCTGTTGACATAATGAAAATGATGTCCAAGAAAAGTACAAGGCCTGAGATTGTTTCATAGCTCACCTATGTAAACAACGGTGCTGTTGTTATAGATCCATGTCAGGACAGAAACATTGGGGAGAAAACACACATTCTCATTTCGCTAATCAACTAAAGTCTTCAATGAAAGCACGTTATCTTGGTCTACCAAATGGTTTAGTGTTTCTGGCATCAAATGAGTCTCACATAGGTGTTCAGTTGGGTCTTGATCAGCACAGAGAGAAAGCAGGTTGAAAACATGTCTTGttctatatctgtatatctgtatatctgtagcaCAATGTCTGTGTCACCGGCAGTGACAGATGCCGCCCACAAAGAGCCTGCACTGTCTGAGTTTCTGCCTATAAGGAAGTTTTCCCCCGCCACTGTACCAAATGCTTGCTtgtgggaaattgttgggtctttgtacaTTATAGTGTGTTCTAGACCTAGCTACtcaatctgtaaagtgtctacAGTTaattattgttatgatttgatactataaataaaattgaatcgaaaaatttaatttaatataatttcaTTTTTCGTTGTTCCTTGTCATGGTGATATTTATGTTATCGGCATCAGTCACACAACAAGTAGTGAAACAGGAACCGCCCAACATGCGGTCGGCAGACCGGAGCACGCGAGCCATGCTGATGCACACTGGACTTATCTTTGGAGCTGCAAAGACACACGAGAGAAACTATCTCCTTTTAACGATTTTCGAGGATGAGAAAGCTCAGAGCGAAAATCTTCTTGCTGGCGGGAGCTCTTGGTCTGTTGGCCCTCcatctttttaaagatttttttgacTACAAAACCGTCCGACTCCACGTAGATGTGATAGAGAATGACATTCAAGTAAGGCGACCCaccacaaaaaagtcatatgtaTACTCCTGgtcaaaatgtcaacaaaatgtGAGTGCTGCCAACATCACAGGCTTCAGCTCTCTTCCTGGTGACATAAAAGACTTTCTCTATTATCGACACTGTCGCCATTTCCCCATGCTGCTGGACCTTCCTGACAAATGTGGAGGAGCTGATAAATCTGCAGAAGTCTTTCTTTTCCTGGTCATTAAAAGTTCCCCTGTGAACTACGACCGCCGAGAGGTGCTGCGTAAAACCTGGGCTAAAGAGAGGTTACACAATGGTGTGTGGATCCGAAGGATCTTCATCTCAGGAACAATTGATACTGGTTTTGAGAAGGAGAGACTGAACAAACTACTCGAGCTGGAGAAACGTGAGTACAATGACATTCTCCAGTGGGACTTTAATGAAGGATTCTACAACCTCACCTTAAAGCAGATACTTTTCCTGGAATGGATGGAAAGGAGCTGTCCGAACGCTCGCTTCCTGCtaaatggtgatgatgatgtctttgccaacacaaacaacatggttGAGTATCTTCAGAGCCTCAAGGAAAATGATGGAAGCAAGCACCTCTTTACTGGACATCTGATCCAGAATGTAGGACCCATTAGAATATCACAGAGCAAATATTTTATCCCAGTTCAGGTGCAGGAGTCAGACTCATATCCTCCCTACTGTGGTGGTGGAGGCTTCCTACTGTCTGGCTATACAGCTTTGGTCATATACAATATGTCCCAGTCCATTCCCATTCTTCCCATTGATGATGTATACATGGGGATGTGTCTGGCCAAAGCAGGACTTGTTCCTGATTCTCATATGGGTGTGAAGACGGCAGGACTGCAGATTCCCTCCAGCACACTAGATGGATACGATCCTTGCTATTATAAAGAAGTTCTACTGGTACACAGATTCCTTCCAGCTCACATGTATCTCATGTGGCAGAGAATACATGATTCTAATCTGAAATGTGGGCCCTCCAAGTCAAGGCTTTAGCATCACAAAACTGTAACTTACATGTAGTGAGAGAGTTTGTTGGCAATTTGTTTCCTGCACCTGCTCTTAGGTTGTGAGTGCAGGTTTGACTCGCTTCATTTCATCATGAGAAAATCTTTGGACTGTTTTTCTACCACTGTTCGGCTGCAGGCTTCAGCACAGTTCAATGGAActtattattttattctttgtCATCAATGTGGGCGAGCAGCAGTCAGCCTGACTCAAAGGGGCACAGCAGTAGTTAGTGTAGGTGTATTGCCCACATACTGTGTGGGTGAGCAACTTTTACTGGAATTAAAAATAGGGTTGCTTGGTATCAGGCTTCAATGTTgtgggttttgtttttcttttctttgttggtACCAAATACTTCTACCTTCTTATTGTTTGATCAGATACTTACTGTTTAAATTATACTTTTATAAAGTAgctatactgtatttatgtaaacTTCTTGTACATCATTATCGAACCAATACCCAGCTGGTGTAAGTGATGCAGGGGGATAAGGTATGCTGTGGTGTCCACAGTCTTACACAAATATAATAAAACTCAGGTTTTCTTAAGACTAGTATGCAGTTTTctgtaatgaaataaaaaaatattaagtaTGCACCTGTATATTTGTGCTCAGAAAGATACTAATGTAGCCTATGTTTTTGTGCCTTAAATCAGTGCTTCTCTAACATATATCACTGGAATTTTGGATGTACTGTCAAATCCCCTTTATATTTATAAGTCAGTAAGAACCATTACAAGGGGTCTCAAATTTTCATGTAAGATTACTGTGTGCTTTCAGGACTTTGTATATTGAAATAAATTGATTACCATgtattttaccattagttaattGAATGTACTGAAATTCATTTTCCTGCTGCTAAGAAGAGGTAATATATTgtgtgattttaaaatgaatggctTTGAGGTTACTGTATATTGTGTACTGCATATAacaaatatgtat
>XM_039810981.1
ctttttgaaaatggtcaTACTGTTATGTAGCAGGATGACAGGATAGTTATCATGTTCATCCCAGATACCAAACAGTCATTGAAACTATGTTAAATCAACATTCCGTTGTCAACATTAAGTCATTGAATCAACATCAAACTCTGATGTTGATTTAACATAGTTTCAATGACTATGACTATGACTTGCTATCTGGGGCCCATGCCATTCCAATGATTTAGCTTCTCATTGATGCCGTGCTTCAGACTGTGTTGCCCTATGGGGAACAAATAAAGGAGATGAGTTGACTCTATTGCGCTGTTTAAAGGAGCTTTTATAAAGGTAGGTCCTATAGCCTGCAGTGAATCAATCTGTTGACATAATGAAAATGATGTCCAAGAAAAGTACAAGGCCTGAGATTGTTTCATAGCTCACCTATGTAAACAACGGTGCTGTTGTTATAGATCCATGTCAGGACAGAAACATTGGGGAGAAAACACACATTCTCATTTCGCTAATCAACTAAAGTCTTCAATGAAAGCACGTTATCTTGGTCTACCAAATGGTTTAGTGTTTCTGGCATCAAATGAGTCTCACATAGGTGTTCAGTTGGGTCTTGATCAGCACAGAGAGAAAGCAGGTTGAAAACATGTCTTGttctatatctgtatatctgtatatctgtagcaCAATGTCTGTGTCACCGGCAGTGACAGATGCCGCCCACAAAGAGCCTGCACTGTCTGAGTTTCTGCCTATAAGGAAGTTTTCCCCCGCCACTGTACCAAATGCTTGCTtgtgggaaattgttgggtctttgtacaTTATAGTGTGTTCTAGACCTAGCTACtcaatctgtaaagtgtctacAGTTaattattgttatgatttgatactataaataaaattgaatcgaaaaatttaatttaatataatttcaTTTTTCGTTGTTCCTTGTCATGGTGATATTTATGTTATCGGCATCAGTCACACAACAAGTAGTGAAACAGGAACCGCCCAACATGCGGTCGGCAGACCGGAGCACGCGAGCCATGCTGATGCACACTGGACTTATCTTTGGAGCTGCAAAGACACACGAGAGAAACTATCTCCTTTTAACGATGGCAGCTCAATACAACCACCTCTCAACagttgatgctaaaagtctgtGCTTCTAAAATGAAGTATAACTCCACGATTTTCGAGGATGAGAAAGCTCAGAGCGAAAATCTTCTTGCTGGCGGGAGCTCTTGGTCTGTTGGCCCTCcatctttttaaagatttttttgacTACAAAACCGTCCGACTCCACGTAGATGTGATAGAGAATGACATTCAAGTAAGGCGACCCaccacaaaaaagtcatatgtaTACTCCTGgtcaaaatgtcaacaaaatgtGAGTGCTGCCAACATCACAGGCTTCAGCTCTCTTCCTGGTGACATAAAAGACTTTCTCTATTATCGACACTGTCGCCATTTCCCCATGCTGCTGGACCTTCCTGACAAATGTGGAGGAGCTGATAAATCTGCAGAAGTCTTTCTTTTCCTGGTCATTAAAAGTTCCCCTGTGAACTACGACCGCCGAGAGGTGCTGCGTAAAACCTGGGCTAAAGAGAGGTTACACAATGGTGTGTGGATCCGAAGGATCTTCATCTCAGGAACAATTGATACTGGTTTTGAGAAGGAGAGACTGAACAAACTACTCGAGCTGGAGAAACGTGAGTACAATGACATTCTCCAGTGGGACTTTAATGAAGGATTCTACAACCTCACCTTAAAGCAGATACTTTTCCTGGAATGGATGGAAAGGAGCTGTCCGAACGCTCGCTTCCTGCtaaatggtgatgatgatgtctttgccaacacaaacaacatggttGAGTATCTTCAGAGCCTCAAGGAAAATGATGGAAGCAAGCACCTCTTTACTGGACATCTGATCCAGAATGTAGGACCCATTAGAATATCACAGAGCAAATATTTTATCCCAGTTCAGGTGCAGGAGTCAGACTCATATCCTCCCTACTGTGGTGGTGGAGGCTTCCTACTGTCTGGCTATACAGCTTTGGTCATATACAATATGTCCCAGTCCATTCCCATTCTTCCCATTGATGATGTATACATGGGGATGTGTCTGGCCAAAGCAGGACTTGTTCCTGATTCTCATATGGGTGTGAAGACGGCAGGACTGCAGATTCCCTCCAGCACACTAGATGGATACGATCCTTGCTATTATAAAGAAGTTCTACTGGTACACAGATTCCTTCCAGCTCACATGTATCTCATGTGGCAGAGAATACATGATTCTAATCTGAAATGTGGGCCCTCCAAGTCAAGGCTTTAGCATCACAAAACTGTAACTTACATGTAGTGAGAGAGTTTGTTGGCAATTTGTTTCCTGCACCTGCTCTTAGGTTGTGAGTGCAGGTTTGACTCGCTTCATTTCATCATGAGAAAATCTTTGGACTGTTTTTCTACCACTGTTCGGCTGCAGGCTTCAGCACAGTTCAATGGAActtattattttattctttgtCATCAATGTGGGCGAGCAGCAGTCAGCCTGACTCAAAGGGGCACAGCAGTAGTTAGTGTAGGTGTATTGCCCACATACTGTGTGGGTGAGCAACTTTTACTGGAATTAAAAATAGGGTTGCTTGGTATCAGGCTTCAATGTTgtgggttttgtttttcttttctttgttggtACCAAATACTTCTACCTTCTTATTGTTTGATCAGATACTTACTGTTTAAATTATACTTTTATAAAGTAgctatactgtatttatgtaaacTTCTTGTACATCATTATCGAACCAATACCCAGCTGGTGTAAGTGATGCAGGGGGATAAGGTATGCTGTGGTGTCCACAGTCTTACACAAATATAATAAAACTCAGGTTTTCTTAAGACTAGTATGCAGTTTTctgtaatgaaataaaaaaatattaagtaTGCACCTGTATATTTGTGCTCAGAAAGATACTAATGTAGCCTATGTTTTTGTGCCTTAAATCAGTGCTTCTCTAACATATATCACTGGAATTTTGGATGTACTGTCAAATCCCCTTTATATTTATAAGTCAGTAAGAACCATTACAAGGGGTCTCAAATTTTCATGTAAGATTACTGTGTGCTTTCAGGACTTTGTATATTGAAATAAATTGATTACCATgtattttaccattagttaattGAATGTACTGAAATTCATTTTCCTGCTGCTAAGAAGAGGTAATATATTgtgtgattttaaaatgaatggctTTGAGGTTACTGTATATTGTGTACTGCATATAacaaatatgtat

Function

symbol description
b3gnt3 Enables N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity. Involved in poly-N-acetyllactosamine biosynthetic process. Predicted to be integral component of plasma membrane. Predicted to be active in Golgi membrane.

NR:

description
PREDICTED: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3

GO: NA

KEGG:

id description
K07970 B3GNT3; beta-1,3-N-acetylglucosaminyltransferase 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039810979.1 False 2365 mRNA 0.41 2 16221639 16225462
XM_039810980.1 False 3217 mRNA 0.40 2 16216296 16225461
XM_039810981.1 True 3293 mRNA 0.40 3 16216296 16225461

Neighbor

gene id symbol gene type direction distance location
LOC120566178 LOC103355552 coding upstream 2743 16209374 ~ 16213553 (+)
LOC120565120 NA coding upstream 11551 16174908 ~ 16204745 (+)
ndufa7 ndufa7 coding upstream 42727 16170463 ~ 16173569 (+)
mast3b mast3 coding upstream 50479 16131146 ~ 16165817 (+)
il12rb1 NA coding upstream 114745 16088746 ~ 16101551 (+)
slc5a5 slc5a5,LOC104958014 coding downstream 31396 16256858 ~ 16275695 (+)
cluap1 cluap1 coding downstream 52583 16278045 ~ 16284985 (+)
ccdc124 ccdc124 coding downstream 60236 16285698 ~ 16288901 (+)
uhrf1 uhrf1,LOC102797162 coding downstream 76461 16301923 ~ 16317498 (+)
LOC120565628 NA coding downstream 232725 16458187 ~ 16459800 (+)
G95952 NA non-coding upstream 46452 16166202 ~ 16169844 (+)
G95929 NA non-coding upstream 88356 16070354 ~ 16127940 (+)
G95877 NA non-coding upstream 234798 15980690 ~ 15981498 (+)
G95876 NA non-coding upstream 235670 15979752 ~ 15980626 (+)
G95873 NA non-coding upstream 241946 15973181 ~ 15974350 (+)
G96070 NA non-coding downstream 277683 16503145 ~ 16503811 (+)
G96075 NA non-coding downstream 367414 16592876 ~ 16593182 (+)
G96076 NA non-coding downstream 450745 16676207 ~ 16676577 (+)
G96086 NA non-coding downstream 546507 16771969 ~ 16772170 (+)
G96088 NA non-coding downstream 652414 16877876 ~ 16878081 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 583484 15523929 ~ 15632812 (+)
dennd1b NA other upstream 1292451 14810368 ~ 14923845 (+)
LOC120565380 NA other upstream 1511943 14689382 ~ 14704353 (+)
G95460 NA other upstream 1594883 14619358 ~ 14621413 (+)
LOC120564965 LOC102299696 other upstream 2816552 13390823 ~ 13399744 (+)
kcnn1b LOC104945110,LOC103355562 other downstream 64361 16289823 ~ 16301000 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other downstream 95032 16320494 ~ 16376449 (+)
nppc nppc,LOC104932751,LOC103372810 other downstream 1630169 17855631 ~ 17859411 (+)
nmur1a LOC103368681,LOC104952433 other downstream 2421241 18646703 ~ 18665113 (+)
G96418 tsc22d2 other downstream 2557138 18782600 ~ 18785636 (+)

Expression


Co-expression Network