LOC120565357


Basic Information

Item Value
gene id LOC120565357
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 20582506 ~ 20587615 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811110.1
TACCCTGACCATGCCCAGTAGCCAGCTACaaatcagactgtggttgtactagtgtgtgtgtcagtatgctGTTGCCTTACTTCCTTGATTGAATGAAGGGAATCTGTAATAACACAAGATGTATCTATTTGatgtttagttatattttacCCAGGTGAAGACTCTGACTGCATTGCATTGGCCATCACCATGTCTGGGTAGTTAATACAGGAAGGTGCAATTGGTGTATCCAGTATTTGAGGTAAACAGGGCCATCTTGTGGTCAGACTAGACGGTACGATACTGTAGGTGTCTGTGGATCATTACTGCTCTTTACATTCAGCCTGTTATTGCATTCTCAATTATTTCCCTTAAACAAACTAAGAATCCTGCCACAGGGGTGAGCTTATTTCATATTTTCCATACCCGTCAAGTTATTCAAGGATTTTCTACAATCTCATTTCTACAAAACAGCACTTGTAGCAATAAGGAATCACAGTTTAAATCCAAACCTACCCTcagcttttgattttttttttaaaagaacatcTATGGTTCTTGTTTCATCACCACTTTTATCATTTAATGTTCGACTCAAAATGGAGGAGATTTTAATATCTCAACTCCAGTGTCATGCTGACCCCCTTGTACCTGTGGGACAAAACTGGTTCGACCAGCAGAGACAAACAAACCTGTTCTTCAAGCAAAGAAAAACTTGTAATCACTGTACTTGTTTTGACTTGTTCTGTTGTAATGCCCTGGAAGTGCCAAATGGTTGCCATAATTCAGATTGTGTCACACGATTTGTCAATTCACATTTCACTTTCATAATGACTATTCTTCCTTAGAAATATTCAAAACGGTTTCTTGAATCCTCAAAATGTACTAATACATTAATTTTAagatcacattcatacagtagTTAATTCTTAGTGGATGTAGAACGTCTTTCAAAAGCTTTATGCTTGAGCTATGGTGGAAGTGTTCAGTTTGAAGAGTATCTTACTCTTATCAGTGTCATCGTGTCCATATTTATTAAAACAGCCTGTCAAACTACTGTATTTCAAAGGCAGATAAACCCTTACATTTTACCAGCTTGTCAACAGGCAGATCAACATTCTGGTGTTAGGCACAAAATCTATGAATCCTTTACAATGATGTGTCTGAGCAAGGAACAAGGAACAAGGAAGCAGATGAAATGTGAAAGATGTGGGTGTCAGTTTGGtctaactgaaatatcacagcTTTGTAACACAGATGCACAGTTGACTGTGAAGAGAAATGGCAATGGCTAGATACAGGACAATGATGAAATTCCTCATCAGTGTTGGGATCCTTTTCCAAGGGTGTGATTCAGATGTGAAATGCCGGGATGACAAAGGAAAAGAGGTGGACTGGTATATTCTATACAAGTTGCCCCGTGTGAAGGATGACGGTTTGTCATATCTGTACATGGATGAGAGCACCAACGGATGGAAAGCCAGCAAAGAGACAATCAACAGTAAATCTAGCACTCTGGCGAACACCCTGAACCCTCTTCTTGACTTCTACGACAGAAAGATTGAAGGCTTTGGATACATGCTCTATAATGATCAACCTCCAGAACCATACGCTGCTCCTGCATCATTTGGCCACAGTAAAGGAGTTGTGATGCTGGACAAAAAAAGTGGAGTTTGGCTTTCACACAGTACACCAAAATTTCCAACATATCGCAGTAAAGACTTCTGGCCAGACAGTGGAACCGCTAATGCTCAAACATTTATGTGCGTGACTTACTCTTATAATCACTTCAAAGAAATAGGATTGCAGCTGAAGTACATCCATGCTTATTCATATGACTCTGACATCCCGACAACCTTTCACAAAGAGCTGCAATGTGTTGCACAGCGAAGCTGCTACCCAAAGAAGGAACCCTGGTTTCGTGTAAAGATGCTGACTTCAATGACAGGACATAATTTCTCTAGCTTTGCGAAATACACCCGTTTTTGGGATGATCTTTACTCTGGCCTTATTGTTAACCATTTGAAGCAGGATCTCTACATTAAGAGCTGGGGGAAGATGCGTAAACCTCTGCCTTCTAACTGCAGCACAGACATCCCTCATCATGTGTACAATGTGAAGGAAGTAAAGCTCCTAAAGGGGAAGCCCTTTGGTGATACTGTTGATCACTCCAAGTGGTGTGTAACTTCTGGTGGTGGCTGGACCTGCATAGCTGATATGAACAGGGAAGAGAGTCAGATGAAAAGAGCTGGAGGAGCAATATGCACAGATAATGTTGCTGTTGGGAAGGCTTTCCATGCACTGATCACACAGTATGAACCATGTAAACATGACCTTCCACATTCTGAGGCTCAACACAGAGAGCTTTAAAGGCACAGGCCTTCGTGGAAATGTAAGGAAAAGTATAGCAGATCTCCAAAAAAAGTATAAGAAAAGACTGGAGCCTGATATCACTTAATAATAACACTAACTACGCCATTACATATCCAGACTTAAAATTGTTGGTTGCAAGCTTTACATTTTGCACAATGTGTTGGTGTAGTATATTAATTCCtgtcttttgtgttttgtattatgtattttaaTCAATGAAAAActgcagtgtttttattttgaaaatcatgCATTAAGCATTTGTCTATACAATCAGGATACTAGAATTCCAGATGAAATAAATTTAACTGAATGATTAGA
>XM_039811111.1
ACCCTGACCATGCCCAGTAGCCAGCTACaaatcagactgtggttgtactagtgtgtgtgtcagtatgctGTTGCCTTACTTCCTTGATTGAATGAAGGGAATCTGTAATAACACAAGATGTATCTATTTGatgtttagttatattttacCCAGGTGAAGACTCTGACTGCATTGCATTGGCCATCACCATGTCTGGGTAGTTAATACAGGAAGGTGCAATTGGTGTATCCAGTATTTGAGGTAAACAGGGCCATCTTGTGGTCAGACTAGACGGTACGATACTGTAGGTGTCTGTGGATCATTACTGCTCTTTACATTCAGCCTGTTATTGCATTCTCAATTATTTCCCTTAAACAAACTAAGAATCCTGCCACAGGGGTGAGCTTATTTCATATTTTCCATACCCGTCAAGTTATTCAAGGATTTTCTACAATCTCATTTCTACAAAACAGCACTTGTAGCAATAAGGAATCACAGTTTAAATCCAAACCTACCCTcagcttttgattttttttttaaaagaacatcTATGGTTCTTGTTTCATCACCACTTTTATCATTTAATGTTCGACTCAAAATGGAGGAGATTTTAATATCTCAACTCCAGTGTCATGCTGACCCCCTTGTACCTGTGGGACAAAACTGGTTCGACCAGCAGAGACAAACAAACCTGTTCTTCAAGCAAAGAAAAACTTGTAATCACTGTACTTGTTTTGACTTGTTCTGTTGTAATGCCCTGGAAGTGCCAAATGGTTGCCATAATTCAGATTGTGTCACACGATTTGTCAATTCACATTTCACTTTCATAATGACTATTCTTCCTTAGAAATATTCAAAACGGTTTCTTGAATCCTCAAAATGTACTAATACATTAATTTTAagatcacattcatacagtagTTAATTCTTAGTGGATGTAGAACGTCTTTCAAAAGCTTTATGCTTGAGCTATGGTGGAAGTGTTCAGTTTGAAGAGTATCTTACTCTTATCAGTGTCATCGTGTCCATATTTATTAAAACAGCCTGTCAAACTACTGTATTTCAAAGGCAGATAAACCCTTACATTTTACCAGCTTGTCAACAGGCAGATCAACATTCTGGTGTTAGGCACAAAATCTATGAATCCTTTACAATGATGTGTCTGAGCAAGGAACAAGGAACAAGGAAGCAGATGAAATGTGAAAGATGTGGGTGTCAGTTTGGtctaactgaaatatcacagcTTTGTAACACAGATGCACAGTTGACTGTGAAGAGAAATGGCAATGGCTAGATACAGGACAATGATGAAATTCCTCATCAGTGTTGGGATCCTTTTCCAAGGGTGTGATTCAGATGTGAAATGCCGGGATGACAAAGGAAAAGAGGTATATTCTATACAAGTTGCCCCGTGTGAAGGATGACGGTTTGTCATATCTGTACATGGATGAGAGCACCAACGGATGGAAAGCCAGCAAAGAGACAATCAACAGTAAATCTAGCACTCTGGCGAACACCCTGAACCCTCTTCTTGACTTCTACGACAGAAAGATTGAAGGCTTTGGATACATGCTCTATAATGATCAACCTCCAGAACCATACGCTGCTCCTGCATCATTTGGCCACAGTAAAGGAGTTGTGATGCTGGACAAAAAAAGTGGAGTTTGGCTTTCACACAGTACACCAAAATTTCCAACATATCGCAGTAAAGACTTCTGGCCAGACAGTGGAACCGCTAATGCTCAAACATTTATGTGCGTGACTTACTCTTATAATCACTTCAAAGAAATAGGATTGCAGCTGAAGTACATCCATGCTTATTCATATGACTCTGACATCCCGACAACCTTTCACAAAGAGCTGCAATGTGTTGCACAGCGAAGCTGCTACCCAAAGAAGGAACCCTGGTTTCGTGTAAAGATGCTGACTTCAATGACAGGACATAATTTCTCTAGCTTTGCGAAATACACCCGTTTTTGGGATGATCTTTACTCTGGCCTTATTGTTAACCATTTGAAGCAGGATCTCTACATTAAGAGCTGGGGGAAGATGCGTAAACCTCTGCCTTCTAACTGCAGCACAGACATCCCTCATCATGTGTACAATGTGAAGGAAGTAAAGCTCCTAAAGGGGAAGCCCTTTGGTGATACTGTTGATCACTCCAAGTGGTGTGTAACTTCTGGTGGTGGCTGGACCTGCATAGCTGATATGAACAGGGAAGAGAGTCAGATGAAAAGAGCTGGAGGAGCAATATGCACAGATAATGTTGCTGTTGGGAAGGCTTTCCATGCACTGATCACACAGTATGAACCATGTAAACATGACCTTCCACATTCTGAGGCTCAACACAGAGAGCTTTAAAGGCACAGGCCTTCGTGGAAATGTAAGGAAAAGTATAGCAGATCTCCAAAAAAAGTATAAGAAAAGACTGGAGCCTGATATCACTTAATAATAACACTAACTACGCCATTACATATCCAGACTTAAAATTGTTGGTTGCAAGCTTTACATTTTGCACAATGTGTTGGTGTAGTATATTAATTCCtgtcttttgtgttttgtattatgtattttaaTCAATGAAAAActgcagtgtttttattttgaaaatcatgCATTAAGCATTTGTCTATACAATCAGGATACTAGAATTCCAGATGAAATAAATTTAACTGAATGATTAGA
>XM_039811113.1
AAAGCCCATACCCTGACCATGCCCAGTAGCCAGCTACaaatcagactgtggttgtactagtgtgtgtgtcagtatgctGTTGCCTTACTTCCTTGATTGAATGAAGGGAATCTGTAATAACACAAGATGTATCTATTTGatgtttagttatattttacCCAGGTGAAGACTCTGACTGCATTGCATTGGCCATCACCATGTCTGGGTAGTTAATACAGGAAGGTGCAATTGGTGTATCCAGTATTTGAGGTAAACAGGGCCATCTTGTGGTCAGACTAGACGGTACGATACTGTAGGTGTCTGTGGATCATTACTGCTCTTTACATTCAGCCTGTTATTGCATTCTCAATTATTTCCCTTAAACAAACTAAGAATCCTGCCACAGGGGTGAGCTTATTTCATATTTTCCATACCCGTCAAGTTATTCAAGGATTTTCTACAATCTCATTTCTACAAAACAGCACTTGTAGCAATAAGGAATCACAGTTTAAATCCAAACCTACCCTcagcttttgattttttttttaaaagaacatcTATGGTTCTTGTTTCATCACCACTTTTATCATTTAATGTTCGACTCAAAATGGAGGAGATTTTAATATCTCAACTCCAGTGTCATGCTGACCCCCTTGTACCTGTGGGACAAAACTGGTTCGACCAGCAGAGACAAACAAACCTGTTCTTCAAGCAAAGAAAAACTTGTAATCACTGTACTTGTTTTGACTTGTTCTGTTGTAATGCCCTGGAAGTGCCAAATGGTTGCCATAATTCAGATTGTGTCACACGATTTGTCAATTCACATTTCACTTTCATAATGACTATTCTTCCTTAGAAATATTCAAAACGGTTTCTTGAATCCTCAAAATGTACTAATACATTAATTTTAagatcacattcatacagtagTTAATTCTTAGTGGATGTAGAACGTCTTTCAAAAGCTTTATGCTTGAGCTATGGTGGAAGTGTTCAGTTTGAAGAGTATCTTACTCTTATCAGTGTCATCGTGTCCATATTTATTAAAACAGCCTGTCAAACTACTGTATTTCAAAGGCAGATAAACCCTTACATTTTACCAGCTTGTCAACAGGCAGATCAACATTCTGGTGTTAGGCACAAAATCTATGAATCCTTTACAATGATGTGTCTGAGCAAGGAACAAGGAACAAGGAAGCAGATGAAATGTGAAAGATGTGGGTGTCAGTTTGGtctaactgaaatatcacagcTTTGTAACACAGATGCACAGTTGACTGTGAAGAGAAATGGCAATGGCTAGATACAGGACAATGATGAAATTCCTCATCAGTGTTGGGATCCTTTTCCAAGGGTGTGATTCAGATGTGAAATGCCGGGATGACAAAGGAAAAGAGGTGGACTGGTATATTCTATACAAGTTGCCCCGTGTGAAGGATGACGGTTTGTCATATCTGTACATGGATGAGAGCACCAACGGATGGAAAGCCAGCAAAGAGACAATCAACAGTAAATCTAGCACTCTGGCGAACACCCTGAACCCTCTTCTTGACTTCTACGACAGAAAGATTGAAGGCTTTGGATACATGCTCTATAATGATCAACCTCCAGAACCATACGCTGCTCCTGCATCATTTGGCCACAGTAAAGGATTGCAGCTGAAGTACATCCATGCTTATTCATATGACTCTGACATCCCGACAACCTTTCACAAAGAGCTGCAATGTGTTGCACAGCGAAGCTGCTACCCAAAGAAGGAACCCTGGTTTCGTGTAAAGATGCTGACTTCAATGACAGGACATAATTTCTCTAGCTTTGCGAAATACACCCGTTTTTGGGATGATCTTTACTCTGGCCTTATTGTTAACCATTTGAAGCAGGATCTCTACATTAAGAGCTGGGGGAAGATGCGTAAACCTCTGCCTTCTAACTGCAGCACAGACATCCCTCATCATGTGTACAATGTGAAGGAAGTAAAGCTCCTAAAGGGGAAGCCCTTTGGTGATACTGTTGATCACTCCAAGTGGTGTGTAACTTCTGGTGGTGGCTGGACCTGCATAGCTGATATGAACAGGGAAGAGAGTCAGATGAAAAGAGCTGGAGGAGCAATATGCACAGATAATGTTGCTGTTGGGAAGGCTTTCCATGCACTGATCACACAGTATGAACCATGTAAACATGACCTTCCACATTCTGAGGCTCAACACAGAGAGCTTTAAAGGCACAGGCCTTCGTGGAAATGTAAGGAAAAGTATAGCAGATCTCCAAAAAAAGTATAAGAAAAGACTGGAGCCTGATATCACTTAATAATAACACTAACTACGCCATTACATATCCAGACTTAAAATTGTTGGTTGCAAGCTTTACATTTTGCACAATGTGTTGGTGTAGTATATTAATTCCtgtcttttgtgttttgtattatgtattttaaTCAATGAAAAActgcagtgtttttattttgaaaatcatgCATTAAGCATTTGTCTATACAATCAGGATACTAGAATTCCAGATGAAATAAATTTAACTGAATGATTAGA

Function

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process
GO:0000737 DNA catabolic process, endonucleolytic biological_process
GO:0004531 deoxyribonuclease II activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811110.1 True 2673 mRNA 0.40 7 20582514 20587615
XM_039811111.1 False 2664 mRNA 0.39 7 20582515 20587615
XM_039811113.1 False 2522 mRNA 0.40 6 20582506 20587615

Neighbor

gene id symbol gene type direction distance location
dnase2b dnase2b,LOC108234386,LOC107392715 coding upstream 242 20576523 ~ 20582264 (+)
samd13 samd13,LOC103130842 coding upstream 14394 20564975 ~ 20568112 (+)
adgrl2a adgrl2,LOC106923620 coding upstream 325912 20156410 ~ 20256594 (+)
cth cth coding upstream 995861 19574855 ~ 19586645 (+)
LOC120565772 srsf11,LOC103363396 coding upstream 1053012 19520942 ~ 19529494 (+)
rpf1 rpf1 coding downstream 683 20588298 ~ 20595439 (+)
spata1 spata1,LOC102789799 coding downstream 10967 20598582 ~ 20605337 (+)
vtg2 NA coding downstream 32980 20620595 ~ 20630337 (+)
LOC120565169 NA coding downstream 65333 20652948 ~ 20662698 (+)
LOC120565171 LOC104931934 coding downstream 81721 20669336 ~ 20671151 (+)
G96692 NA non-coding upstream 96620 20474807 ~ 20485886 (+)
LOC120565515 NA non-coding upstream 111759 20468553 ~ 20470747 (+)
LOC120565226 NA non-coding upstream 293125 20266651 ~ 20289381 (+)
G96653 NA non-coding upstream 533289 20047879 ~ 20049217 (+)
LOC120565691 NA non-coding upstream 535134 20047018 ~ 20047372 (+)
G96742 NA non-coding downstream 27317 20614932 ~ 20615202 (+)
G96753 NA non-coding downstream 84051 20671666 ~ 20674195 (+)
G96754 ssx2ip non-coding downstream 86642 20674257 ~ 20676737 (+)
G96758 NA non-coding downstream 113824 20701439 ~ 20701938 (+)
G96775 NA non-coding downstream 155452 20743067 ~ 20743775 (+)
prkacba prkacb other upstream 17682 20548999 ~ 20564824 (+)
G96513 NA other upstream 1050829 19530767 ~ 19531677 (+)
G96418 tsc22d2 other upstream 1796870 18782600 ~ 18785636 (+)
nmur1a LOC103368681,LOC104952433 other upstream 1917393 18646703 ~ 18665113 (+)
nppc nppc,LOC104932751,LOC103372810 other upstream 2723095 17855631 ~ 17859411 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other downstream 823721 21411336 ~ 21441558 (+)
lsm7 lsm7,LOC102793261 other downstream 967279 21554894 ~ 21557731 (+)
G97093 NA other downstream 1103282 21690897 ~ 21782000 (+)
G97321 NA other downstream 1696031 22283646 ~ 22287272 (+)
LOC120565764 LOC103367403 other downstream 1897896 22485511 ~ 22491235 (+)

Expression


Co-expression Network