LOC120565394 (LOC104935534,LOC103395676,LOC104932847,LOC103395770)


Basic Information

Item Value
gene id LOC120565394
gene name LOC104935534,LOC103395676,LOC104932847,LOC103395770
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 4131863 ~ 4132573 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811203.1
TACACCGAAGAATAAACAACAAGATGTCTGGACGCGGGAAAGGTGTCGGTAAGACCAGGGCGAAGGCGAAGACCAGGTCCTCCCGGGCCGGGCTCCAGTTCCCGGTGGGTCGTGTACACAGACATCTGAGGAAGGGGAACTTCGCTCAGCGTGTCGGTGCCGGAGCCCCCGTGTACCTGGCGGCCGTGCTGGAGTACCTGACCGCTGAGATCCTGGAGCTGGCTGGAAACGCTGCCCGCGACAACAAGAAGACCCGCATCATCCCCCGCCATCTGCAGCTGGCCGTCCGCAACGACGAGGAGCTCAACAAGCTGCTGGGCGGAGTGACCATCGCTCAGGGCGGCGTGCTGCCCAACATCCAGGCCGTTCTGCTGCCCAAGAAGACCGAGAAGCCCGCCAAGAAGTAAACAACCCGGAAACCGATACAACAAACCCAAACAAACGGTTCTTTTAAGAGCCAAACACACTTACAACTGAAGACCGAGCTCCTTTGTTACTATGGTTACATTTTCATGACGGTTAGTGATTGTTTAACAACCAAAAACGGTACAATTAAAGACTAATTATTGTGATCCTACAGTCTATATAAATGTACATTATGAGATAAGCCTATTATTGGACTAGTTTTGTTTTAGTTTCCCGAGAAGCCCGCCAAAAAACATTCGAacaaaaggctgttttatgAAGCCTAATACAGCAAACTTGATACTA

Function

NR:

description
PREDICTED: late histone H2A.L3-like

GO: NA

KEGG:

id description
K11251 H2A; histone H2A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811203.1 True 711 mRNA 0.51 1 4131863 4132573

Neighbor

gene id symbol gene type direction distance location
LOC120565880 LOC104960898 coding upstream 277053 3826863 ~ 3854810 (+)
LOC120566051 NA coding upstream 498498 3630184 ~ 3633365 (+)
LOC120565597 sgta coding upstream 557714 3217726 ~ 3574149 (+)
LOC120565455 patj,LOC104952322 coding upstream 783647 3337832 ~ 3348216 (+)
LOC120565438 gadd45b coding upstream 1129324 2999620 ~ 3002539 (+)
LOC120565396 LOC108262407,LOC104935308,LOC104932967 coding downstream 9005 4141578 ~ 4142106 (+)
LOC120565404 si:ch73-368j24.3,LOC108247233,LOC102383489,LOC105916187,LOC107569590 coding downstream 13920 4146493 ~ 4151003 (+)
LOC120565402 LOC106958509,LOC103391927,LOC106963510,LOC107690788 coding downstream 28336 4160909 ~ 4161442 (+)
LOC120565392 LOC103395674,LOC105891059,LOC101167724,LOC101068541,LOC105888650,LOC105896821,LOC106527799 coding downstream 212086 4344659 ~ 4345129 (+)
LOC120565398 LOC108262407,LOC104935308,LOC104932967 coding downstream 233549 4366122 ~ 4366561 (+)
G93128 NA non-coding upstream 27995 4102854 ~ 4103868 (+)
G92915 NA non-coding upstream 105592 3980907 ~ 4026271 (+)
G92894 NA non-coding upstream 207564 3865706 ~ 3924299 (+)
G92893 NA non-coding upstream 242722 3876213 ~ 3889141 (+)
G92892 NA non-coding upstream 254491 3827312 ~ 3877372 (+)
G93151 NA non-coding downstream 35748 4168321 ~ 4197972 (+)
G93149 NA non-coding downstream 46542 4179115 ~ 4187462 (+)
LOC120565405 NA non-coding downstream 103235 4235808 ~ 4265365 (+)
G93170 NA non-coding downstream 148878 4281451 ~ 4299758 (+)
G93169 NA non-coding downstream 150296 4282869 ~ 4283295 (+)
frem1b LOC100693369,LOC101486624,LOC102206675,LOC102294239 other upstream 308081 3714919 ~ 3823782 (+)
G92848 NA other upstream 525038 3600978 ~ 3606825 (+)
LOC120565459 NA other upstream 536475 3540034 ~ 3595388 (+)
G92838 NA other upstream 641242 3425734 ~ 3490621 (+)
G92826 NA other upstream 667657 3351767 ~ 3464206 (+)
G93150 NA other downstream 42029 4174602 ~ 4217826 (+)
LOC120565391 NA other downstream 152182 4284755 ~ 4313515 (+)
trmt1l trmt1l other downstream 552651 4685224 ~ 4713233 (+)
G93613 NA other downstream 1902796 6035369 ~ 6051520 (+)
G93638 NA other downstream 2069512 6202085 ~ 6214017 (+)

Expression


Co-expression Network