LOC120565421


Basic Information

Item Value
gene id LOC120565421
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 2586515 ~ 2593983 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811224.1
aaaataaaagctgaaagAGCCGATGAACCCTTTTACAGAGTCTGTTTAGAAAGACTTCTCAGAAAGTAGAGAGCGGTCCAGAAATTAAAAAGATAATCTCAGAGACGAGCCAGCAAACGAAGGAAGACCCATCAGacgccttcaaaataaaagcttcttcAAAGGAGCGAGACAACAAGGGCGTCACGGCGAAGGAAGACCCATCAgatgccttcaaaataaaagcttcttcAGACACCTTCAGGCTCAGTCCTTCAAAGGAGCGAGACCACAAGGGCGCCACGGCGAAGGAAGACTCATCAGacgccttcaaaataaaagctgaaagAACTGACGAACCCTTTTTACAAAGTCTGTTCAGAAAGACTTCTCAGAAAGTAGAGAACAGTCCAGAAATTAAAAAGATAATCTCAGAGACGAGCCAGCAAACAAAGGAAGAAATGGACGCTGGTTATAAAGGAAACGTCTCGGAGCAAAACGAAGAGACAGTTGGCGCCGAGAAAATCAACAACTTGAAAGACGCGGTGAATGAAATGGAAGTAGCCAAAACTACAAGTCTGTCTGAAACACAACACGGTGAGGAAACGATCAACTGGCTGAGCTTTCTTAACTTTAAAGACGTCGCGAACGTCTTCAGACTCAGTCCTTCAAAGGAGCGAGACAATAAGGGTGCCACGGCGAAGGAAGACCCATCAgacaccttcaaaataaaagctgaaagAGCAGAAGAACCCTTTTTACAGAGTCTGTTCAAAAAGACTTCTCAGAAAGTAGAGAACGGTCCAGAAATTAAAAAGATAATCTCAGAGACGAGCCAGCAAACGAAGGAAGACTCATCAGacgccttcaaaataaaagcttcttcAAAGGAGGGAGACAACAAGGGCACCACGGAGAAGGAAGACTCATCAGacgccttcaaaataaaagctgaaagAACCGATGAACCCTTTTTACAAAGTCTGTTCAGAAAGACTCAGAAAGTAGAAATTAAAAAGATAATCTCAGAGACAAGCGAGCAGACGAAGGAAGAAATGGACGCTGGTTATAAAGGAAACGTCTCGGAGAAAAACAAAGAGACAATCGGCGCCGAGAAAATCAACAACCTGAATGAAGTGGAAGTAACTGGAACTACAGATCTCTCtgaaactcaaaatagtgaggAAACGATCAACCATCTGAGCTTTCTTAACTTTAAAGACGTCTCGAATATCTTCAGACTCGGTCCTTCAAAGGAGCGAGACCACAAGGGCGCCACGGCGAAGGCAGACTCACCAgacaccttcaaaataaaagcttcttcAAACGCCTTCAGGCTCAGTCCTTCAAAGGAGCGAGACAACAAGGGCACCACGAAGAAGGAAGACTCATCCAactccttcaaaataaaagctgaaagAACCGATGAACCCTTTTTACAGAGTCTGTTTAGAAAGACTTCTCAGAAAGTAGAGAGCTGTCCAGAAATTAAAAAGATAATCTCAGAGACGAGCCAGCAAACGAAGGAAGACTCATCAGacgccttcaaaataaaagcttcttcAAAGGAGCGAGACAACAAGGGCGTCACGGCGAAGGAAGACCCATCAgacaccttcaaaataaaagcttcttcAAAGGAGGGAGACAACAAGGGCGCCACGGCAAAGGAAGACTCATCCGacgccttcaaaataaaacctgaaagaACGGACAAACCTTTTTTACAGAGTCTGTTCAGAAAGACTTCTCAGAAAGTAGAGAGCGCTCCAGAAATTAAAAAGATAATCTCAGTGACGAGCCAGTTTGCTGGTTTTAAAGGAAACGTCTCGGAGCAAAACGAAGAGACAGACGACGCCGAGAAACTCAAAAACAACCTGAAAGACATGATGAAAGAATTGGAAGTAGCTGAAACTACAAGTTTGTCTGAAGCACACCACGGGGAGGAGATGATTCCTACATCACGGGCAGCTGAGCAGAGATGTGAGACTGAAGAGTCGAGTGAGTCAGCAGACGATGACAGGATGAACAAAGAAGACgcagaacaagaagaagaagaagaagaaaagccaTCAGAGACTCTTCCTCTGCAGCCGCTGTCCTCTGAGATCGATCTCTTCAGCCTGAGAGACCAAGACGACGAGAGGGGTCGGCCAGGAGGAATCTCGTGGACGGTGAAGAGCTTCGCCTGttatctgacctttgaccccaaCACTGCCAACTCAGAGCTGCGTCTGAGCGACAGCAACCGGACGGTGACTCGAGAGTGGACGGCGCTGTGGCCGCCGGAGCACCCGGACCGCTTCCGGCGCTGCCCGCAGGTCCTGTGCCGGGAGGGGCTGCTGGACTCGGCGtactgggaggtggagtggCGCGGCGGCGCCGACATCGGCGTCGCCTACAACGACAACTGCCGAGACGGAGACGCGGCGCGCTGCCTGCTGGGACACAACGAGCGCTCCTGGAGCCTCGAGTGCTCGGAGGGAAGCTACGCGGCGTGCCACGCTAACCGGAGGTTCAGGGCAGCCGTGGCGGCGCCTGAACCGTTCGCACGCAGGGTTGGCGTGCACCTGGACTGGTCCGCAGGCGCTCTGTCCTTCTACTGCATCTCGCCGGACGCCATGGTGCACCTTCACACCTTCAGAGACACCTTCACCGAGCCGCTGTACCCGGCCTTCTGGGTCTGGGCGTACGACGGGGCCGTGTCGCTGAGCCAGGTGGAGTTAGGCTGGGAACGGCTGCTGCAGTGAACCGCACGGACATATGGCTCAGTCACCGCGGTAACCCTCGGCTACAGGAGTGACCTCTGCTACAGGAGTGACTGCTATAGGAGTGACTGCTACAGGAGTGTCTGCTACAAGAGTGACTGCTACAGGAGTGACTGCTACAGGAGTGACTGCTACAAGAGTGACTGCTACAAGAGTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811224.1 True 2906 mRNA 0.50 4 2586515 2593983

Neighbor

gene id symbol gene type direction distance location
LOC120565432 NA coding upstream 124918 2450531 ~ 2461597 (+)
LOC120565428 NA coding upstream 159388 2423987 ~ 2427127 (+)
LOC120565427 NA coding upstream 165910 2412231 ~ 2420605 (+)
dph5 dph5,LOC102795811 coding upstream 514612 2050962 ~ 2071903 (+)
LOC120565574 NA coding upstream 592647 1980838 ~ 1993868 (+)
LOC120565422 NA coding downstream 227659 2821642 ~ 2840859 (+)
LOC120565437 LOC104954941,LOC104939024,LOC103367594,LOC105940182,LOC103463144 coding downstream 251761 2845744 ~ 2859118 (+)
LOC120565438 gadd45b coding downstream 405637 2999620 ~ 3002539 (+)
LOC120565597 sgta coding downstream 623743 3217726 ~ 3574149 (+)
LOC120565455 patj,LOC104952322 coding downstream 743849 3337832 ~ 3348216 (+)
G92578 NA non-coding upstream 6629 2579024 ~ 2579886 (+)
G92603 NA non-coding upstream 34716 2551397 ~ 2551799 (+)
G92587 NA non-coding upstream 53349 2449583 ~ 2533166 (+)
G92595 NA non-coding upstream 68098 2507039 ~ 2518417 (+)
G92594 NA non-coding upstream 85393 2497787 ~ 2501122 (+)
G92695 NA non-coding downstream 132750 2726733 ~ 2727072 (+)
G92713 NA non-coding downstream 167149 2761132 ~ 2761357 (+)
G92722 NA non-coding downstream 181510 2775493 ~ 2800033 (+)
G92740 NA non-coding downstream 246985 2840968 ~ 2841202 (+)
G92747 NA non-coding downstream 267009 2860992 ~ 2865958 (+)
G92575 NA other upstream 4144 2533744 ~ 2582371 (+)
reep6 reep6 other upstream 206255 2371988 ~ 2380260 (+)
G92333 NA other upstream 216843 2365899 ~ 2369672 (+)
G92293 NA other upstream 510411 2072182 ~ 2076104 (+)
LOC120565575 NA other upstream 560584 1988808 ~ 2025931 (+)
G92770 NA other downstream 388243 2982226 ~ 2983014 (+)
G92773 NA other downstream 416691 3010674 ~ 3094410 (+)
G92782 LOC103461136,LOC106954349 other downstream 531906 3125889 ~ 3132204 (+)
G92826 NA other downstream 757784 3351767 ~ 3464206 (+)
G92838 NA other downstream 831751 3425734 ~ 3490621 (+)

Expression


Co-expression Network