efcab7 (efcab7)


Basic Information

Item Value
gene id efcab7
gene name efcab7
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 12703144 ~ 12717685 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811307.1
TCTTCCAAACCCTGCGATTATTTCCGTATCACCTCATAGGGTCGACTACGGTATTACATTAGTTTTAGCTGGAACTGGAAAGTTAACGTTTGTTTCTTCTGTGTCGATTTTGATTAACCCCGATTAGTTTTTGCAGAGACGGTTACCTAGCAACTGCCAGCGAGAGAGCTACGGTGTTTGGCAAAATGTCACTGCTAAGGCGGATTTGATTCAATAAAATGCATCTCGCATGCTTTCAGATTAATTTTACGGTAtggtgaaaatgtaaaaaaaataatagcattTAGCCCAAATTAGCTTCCATATGTGGCTGTCGCCTGGATTCTAATAAGCTGGAGAGCGAGAGTGCTAAATTAGCTTTGctaacagtaacgttaacgttacccaCCGGGTCGatctgtttattcaaagatgtCTTCTCAAGAGTTACTTCGTCCtgctgatgaagaggaggctttCTACGTGCAGTGCAGAGCTGCATACCTTGCTGTGTTCAGATCTAGTTTGACGTATATAACTTCGAAACAGCAGCTATGTCGTGCTCTCCAGCAGGCTGGTAGAAATCCAACCAATGCAACTCTCAATAAATACTGGACCCAGAGAACATCCAAACTGAACTTTGATGACTTCTGTGAGATTCTTAAAAATGAGAAGAGAACTGAGGAAACAGAGCTGATGAGAGCCTTCAAAAAGATAGATGTGAACAGCGATGGCTACATTTCACACAGTGAACTGGAGAAGGCCCTCACCACTaaaggagagaaaatgaCCACCGAAGAGGTGAATGCTATTTTCTCATTGGCTGACATCAACAAAGATGGAAAACTGGACTATGCAGAATTCTGCAGATTGCTTGTGTCTACAGCAGAGCAGTGTCAGATGGCTGCTTTGGAGAGGCTCGAGGCTAACGCCAAGCTGAAGAGACAGAACTTTGGCAGTCAGTCATACAGCCCTCCGAAGAGCTCAGTGTCATcggcatcagcagcagcagcacaagcGGCAGCGACTCTCTCTCAGCCTCCAGAATCAGACACCACACTCAAGAAAGAGAGCCGATCATCCTCCCGTCCTTCTTCCGCTCGCAGTAGACGGTCGTCCCTGTCAAACTCAGTCACAATGACATCCAGCAGTACTAAGGGCAGCAAAATCCCAGAGCCTTCAGGCTTACAGGAGTGGCATCACAGTTATATGAAGGGCTGTTTCTTCTTGGAGGATGATGGGAGTATCGGCTCTCTACAGTACCAGCTCCACGTCCCCCAGACAACTAACGTCTACCTAACCATTCAACCACTCAGCTTCAGCCACGGACCCGACAAGCCTTCTTCATGGATGACAGTGGACACAGCTCTTTTTGTCATGTCAGCTGGTGAAATCAGAGAGGAATCAACTTTAGTGTGTTTCACTGAGTCGAAAGACAAAgaaAAGTATGTTTGGAAAGGAGAATTGCATGCTGGGACTTACTACCTGCTTCCCTTTACCAGTGGCTGCAAACTAAAGAAAAGGAGCAAAAAGAGCCTTTCTAATAAACCGTTAGAGCTCATCTACAGGACTGACACTGGAGAACTAGACCTCACCAGGGagctcagGGAGGTGCTGTCTGACATCTTTGAGGTGATAGACCTGGATGGGAATGGCTTGCTCAGTCTAGAGGAGTACAATTTATTTGAGCTAAGGACCAGTGGAGAGAAATGCGACAAGGATGCTTGGGCTGTCTGCAAAGAGAACTTTGATATGAGAAAGAACCAGCTAACAAAGCAGGGTTTCATGGAGCTGAACTTAATGGAGGCCACGGAGAAAGATGGAGACCCTGCAGACCTGTGGGTCACCCTGGAAGCCATGGGCTACAACCGAATGCTGGAGCTGGTAGAGGCTTGTCCATTCCAGATAGATGTGCACTGTGAAGGCACTCAGCCATCCATCCAGCCACTCAGTATGGACTCAGGGCCCAAACTTCTGATCCAGGCCCTCCAGAAGTCCATCACAGCCAGGACAGGGGCCAAAGCACTGAGGGGACAAGACAACGTCTTCATCTACACCTACCGAGGAGAACACAGGATCTCCTCCCTCATAGCCAACAAGTCCAACCAGAAAGTGACTGTCCATGTAAACAATGAGCAGAGCAGGaactgctgcagcagcagaggcATGAGTGTGTTTGCTGTTGAGGTGCCAGCCAGGACTAAGATGGTCTGCCAACACATCCTGCCCATCAATGAGAGACAAGATTGGACCTACAACTGTGTGGAGACCATACTACCCTGCTAGTAAAACTGTACTCCTGTCACTCACCTATGCTAATGATACAGATAAGCGATGGCCGGAAATGATTCATAAACCAGTGGTTTCCAATAGGATACAAAACAAATAGAAACTGTTCTATATCCACTGGCAATGTGAAAACTGTGTGACTGGTTATTTGTTTATCTGTTATTTTACTGTAACTAAGAATGTCCAAAAGGAACACTGCATAATCATTTTAACTTTTAGAAGCCCCATGTTCAAGGCTTACCTGTGAGTTTTATAATATGTCAGACATCAGGAGCTGAGACCTTCTGCCTGCTTGTGGTAAGAACTGTGTTTCAGAAGCTCTGTGACTTGATGCATCAGAGGTGTTAACTATTAACGGCAGCGAGAGACGGTCACTGTAGTGATAAAGTACAGCTGAAAATGGTTGTTACTGTTTTGCATGTGTGACATGTTTCCAAACATTTCAAAATTCCTTTTACaataattaacattttaaatgtatgaaGTGCAAA

Function

symbol description
efcab7 Predicted to enable calcium ion binding activity. Orthologous to human EFCAB7 (EF-hand calcium binding domain 7).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K23852 EFCAB7; EF-hand calcium-binding domain-containing protein 7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811307.1 True 2759 mRNA 0.45 13 12703144 12717685

Neighbor

gene id symbol gene type direction distance location
alg6 alg6,LOC102784959 coding upstream 12886 12670221 ~ 12690258 (+)
foxd3 foxd3,LOC102785247 coding upstream 39251 12661919 ~ 12663893 (+)
atg4c atg4c coding upstream 180710 12512606 ~ 12522434 (+)
angptl3 angptl3 coding upstream 204097 12494754 ~ 12499047 (+)
usp1 NA coding upstream 243999 12450052 ~ 12459145 (+)
pgm1 pgm1 coding downstream 2406 12720091 ~ 12730969 (+)
cachd1 cachd1 coding downstream 178602 12896287 ~ 12994764 (+)
ak4 ak4,LOC102785469 coding downstream 432165 13149850 ~ 13158641 (+)
dnajc6 dnajc6,LOC102786137 coding downstream 446020 13163705 ~ 13204369 (+)
lepr NA coding downstream 493796 13211481 ~ 13258561 (+)
G94813 NA non-coding upstream 783107 11916631 ~ 11920037 (+)
G94779 clg17h1orf52,LOC104926352,LOC103370521,LOC101473273,LOC102790030,LOC102310746 non-coding upstream 1044072 11651522 ~ 11659072 (+)
G94747 NA non-coding upstream 1125883 11576788 ~ 11577261 (+)
G94706 NA non-coding upstream 1462907 11238444 ~ 11240237 (+)
G94691 NA non-coding upstream 1508214 11194647 ~ 11194930 (+)
G94997 NA non-coding downstream 148227 12865912 ~ 12866251 (+)
G95002 NA non-coding downstream 277550 12995235 ~ 12995654 (+)
G95027 jak1,LOC102785183 non-coding downstream 390004 13107689 ~ 13112320 (+)
G95040 NA non-coding downstream 428620 13146305 ~ 13146795 (+)
LOC120564967 NA non-coding downstream 654759 13372444 ~ 13375668 (+)
lrp8 LOC103355569 other upstream 260064 12161638 ~ 12443080 (+)
znhit6 znhit6,LOC102790327 other upstream 881262 11789135 ~ 11821882 (+)
LOC120565923 LOC103370579,LOC100695501,LOC102794561,LOC101470646,LOC102226407,LOC102291616 other upstream 1244998 11359690 ~ 11458146 (+)
si:ch211-162e15.3 LOC103376230,LOC100712485,LOC108238459,LOC102795316,LOC102207055 other upstream 1754828 10946932 ~ 10948316 (+)
G94598 NA other upstream 1761900 10916925 ~ 10941244 (+)
ror1 ror1 other downstream 25120 12742805 ~ 12865842 (+)
raver2 raver2 other downstream 287883 13005568 ~ 13100445 (+)
G95046 NA other downstream 455340 13173025 ~ 13220372 (+)
LOC120565776 NA other downstream 618049 13335734 ~ 13342098 (+)
LOC120564964 LOC102797871,LOC101481459,LOC102301033,LOC106675533,LOC102797273,LOC102300313,LOC102200286 other downstream 661713 13379398 ~ 13382747 (+)

Expression


Co-expression Network