LOC120565506


Basic Information

Item Value
gene id LOC120565506
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 11105141 ~ 11107198 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811350.1
ccaaatcccagaatgcacttgcttcgctgctctacgaggccactcccaagccacgcctaccggtTCGAGAGGGCAGGAGGGAGGGAAATTcaaccttatatactgtctatgctcaAATGACTCGAAAACTGAAAAGACACCAGTTAATGTGAGTCTCCGTGACGAGTTAGTtgataaattaatttaaatactagcgtttttgttttttttcatcgaAATGGTGCTAAATTGCTTTGTACCGCGATGTACAGCCAAAACCAGGAAAGGACAAGCAGTAAGTTTCCATCATTTGCCTGTTAAACATTTGGAGCGGTGCAAACAGTGGCTGCGGGCTATCAACCACCCAAAGTTTCGAGAAGACACCGATATGGGGAACCTGAAAAACCTGAGGGTTTGCAGTCGCCATTTCAAGCTGGAAGACTACGAACCCAATGTACTTGGAATGAAGAGAATCACTCTAAAGGACACAGCAATTCCGTCGATATTCACCTTCCCAGAAGACGAACAGCCCGGGCCATCTGTTAGAAAACGCATTCGCCGAAAGACTCCAATCGCGTCTAATCCTTTAGTGTCCTCGTCGGAGGATGAAGAACAATTGCTACTGACCTCAACACCGGTCAAAATTCCTGCCTCTGGCCAAGAACAATTTtcacCTGGAGGCCTCAATACCAGCGCCGGCAGCATTGCTGAATTAACAGTCACCCTCTCATCAACATCTTCATCAGATGATGAAGGTGGAAAGGACTGGCGTGAAAAGAAGATAATTGTCAATGAATCCAGCCTCATGTCACTCTTCAAATTTTGCCAGATGTGCGGGAAACCAATTTTATCAAAGAAAATTGTCGACTTTGGGGCAAAGAGGGAGGTGGATTGGACATGTCTTGGGGGGCATTCTGGGACTTGGACATCTTCACATGACATGTGAACCTCCTTGCAgcctagggctgtgcaattaactaaaatagtataatcgagaaaaaacgaTTTATTTTTGCcctgttctgttttgcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811350.1 True 1012 mRNA 0.45 3 11105141 11107198

Neighbor

gene id symbol gene type direction distance location
LOC120566056 LOC103374891,LOC100702684,LOC101467020,LOC102305063 coding upstream 345212 10748929 ~ 10759929 (+)
LOC120566058 LOC103374891,LOC102305063,LOC100702684,LOC101467020 coding upstream 371180 10722902 ~ 10733961 (+)
tm4sf18 LOC100702951,LOC102305373,LOC101466751,LOC102228636,LOC103155263,LOC104936000,LOC103374892,LOC105936905 coding upstream 390259 10696023 ~ 10714882 (+)
LOC120565966 LOC101466472,LOC102777579,LOC108238401,LOC101066382,LOC106527066 coding upstream 414055 10681539 ~ 10691086 (+)
slc25a24 slc25a24,LOC104951356,LOC104935995 coding upstream 436255 10653639 ~ 10668886 (+)
ccdc17 NA coding downstream 115324 11222522 ~ 11237901 (+)
LOC120565497 LOC103370597 coding downstream 141236 11248434 ~ 11304093 (+)
trnam-cau_8 NA coding downstream 141377 11248575 ~ 11248647 (+)
LOC120566075 LOC101470345,LOC102300495,LOC102205443,LOC103370586 coding downstream 204540 11311738 ~ 11356871 (+)
LOC120565022 NA coding downstream 366158 11473356 ~ 11490038 (+)
G94677 NA non-coding upstream 619 11104221 ~ 11104522 (+)
G94676 NA non-coding upstream 2326 11102476 ~ 11102815 (+)
G94674 NA non-coding upstream 3572 11101328 ~ 11101569 (+)
G94613 NA non-coding upstream 107940 10996477 ~ 10997201 (+)
G94609 NA non-coding upstream 128076 10963548 ~ 10977065 (+)
G94680 lrrc7,LOC103129487,LOC106524106 non-coding downstream 7200 11114398 ~ 11114677 (+)
G94681 NA non-coding downstream 8506 11115704 ~ 11116031 (+)
G94682 NA non-coding downstream 9701 11116899 ~ 11117140 (+)
G94683 lrrc7 non-coding downstream 10133 11117331 ~ 11117684 (+)
G94684 lrrc7 non-coding downstream 11080 11118278 ~ 11118503 (+)
si:ch211-162e15.3 LOC103376230,LOC100712485,LOC108238459,LOC102795316,LOC102207055 other upstream 156825 10946932 ~ 10948316 (+)
G94598 NA other upstream 163897 10916925 ~ 10941244 (+)
atp11b atp11b other upstream 690315 10363462 ~ 10414826 (+)
LOC120565490 NA other upstream 945260 9985719 ~ 10159881 (+)
ttc14 ttc14 other upstream 1156904 9933613 ~ 9948237 (+)
LOC120565923 LOC103370579,LOC100695501,LOC102794561,LOC101470646,LOC102226407,LOC102291616 other downstream 252492 11359690 ~ 11458146 (+)
znhit6 znhit6,LOC102790327 other downstream 681937 11789135 ~ 11821882 (+)
lrp8 LOC103355569 other downstream 1054440 12161638 ~ 12443080 (+)
ror1 ror1 other downstream 1635607 12742805 ~ 12865842 (+)
raver2 raver2 other downstream 1898370 13005568 ~ 13100445 (+)

Expression


Co-expression Network