LOC120565507


Basic Information

Item Value
gene id LOC120565507
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 9785792 ~ 9796989 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811353.1
AACTGCAATCAACAATTTAAAAGCTCCAACAGGACACTACAGAACCAAGCAGAGCCATTTTAAAATCATCTCAACCAATGAGGGCTTCAGAACAGTCCACAGGACAAATCATATCTTAAGAGCACAactctgagccaatcagagttttaAACTTTGATAGATCTCAGCTTGAGGTAATGAGAGCTCAACTGTTTAGATGTTTGGAAGGCTACCATCACCTCAGGAATATATTTGAAAGGTTTAACTGAATCTAGAGAGGAAATAACAGGCAGTACCAGGcattaaaactataaaaagggAAAACCGATTAAGgagataaaaagaaataaagagaaaGAGCAGAGGAAAGCAAAGGCCAAAGCAAGGATCTAAGAGAAAAGACAGGGAGGTTTTAAGTGAAGGAAGAGTGAAAAGGAGATTTTTATGATAAGGAGTCAAACAACAaagtacagtttttaaaaagtaaGAATTACAGCAGATATTGTAAAGTTGTATCAGAGAGGATGAAGCTTAGCGAGAGGAAGGCAACGCTGCTGGCCGGCACAGACACCATTGAGATGGAGCAGTTTTCTTCAGAGGAGCCTTGCATGGGGACATCAAAACAGAAGGAGGAAGGACAGCGCTTTGACAAGAGACACCTGGAGCATCCTTGTGTCACCGACTGTGAGGAGGAACCAGAGGCACGCACGCATCTCGCCATGCCCAAAACAGAGGCCAAGCACTGCCCTCCTGATCTAACATTCATGGAAGAAATTGAGATGGAAATGGAGGTGTTTCCACCCTTCAAAATGCCTGagactgaaaataaaatggTCAAATCAGCTGATCCTTCCATAATGACCCCGCCGTCCCTAAACAAAGCTAGTCGTCTCAAGTGGAAGAAACTGACTCCGCAGAAGACAGGACTGGTGGTCAAAGATGTGGTCTGTCTACCCAGAGGACACTACCTGACACAGCTGGAGAGACACAGTAAGCCACAAGGCAAAGAACGAGCATCTCTAGCGGCCATTGGAATGACTGCTCGTATCACCATTGATAATGGTTGGTCGGCCAATCAAATGGAGAGTCGGCTGGCTATGCTCTTCCAGGGGCGGTTTGTAAAACGGGCGGGACAAAGGTTCTCTTTCACAtatctgcagtgtGTACCGGGCTCCAGGGTGCTGTTTGTCCCAGACTCCCCTGCAGAGGGCTGGACTGGGGAGCAGGTACTCAGGACCTGTGGACATGGTGCTTTGTACATCCTCAGCCACCAGGACCACCCTCAGTGCATACAATTCAAATACTCTCAACAAGCACAACTGGAGAAGTCAGCAAGCAAGACACCTATGGTGAACATGATGAAGTTCTATCTGGAGGCCAGCACAGAGAGCTGCCCAGACAAAGAAAATCAGCTTGGAAGACATACCCAGCCTTGTGTTCCCAGCACTACCGAGAAGTTCAAACTGGACCTGGACTCCATCCTGAAACTGTTCAAACAGGAGAACATGGATCGAGGTGAAGAAACCcacatccaggtggggctgctCCACAGCGCTCTGAAGATGGTGAGGACGCCGGGCTTCTGTTTCAGGACAACACCTGGCGTCTCCTTCAGTGGAGAGAAGGCTGACGGCTACGAGGGACCTCTCAGAGAGTTCTTCAGATTGACTTTGTTGGAGCTGCGACAAAGCTCTGTATTTGAGGGTCTTCCGGGGCGTCTGTTGTTGACCTACGACCTCGCAGCTCTTGAAGATGGGAAGTATTACGAAGCAGgtgttctgattggctggtctCTGGCTCAGGGCGGGCCTGGACCTCGTTGTCTACACCCTGCCCTCTACCAGTTGATGTGTGGCCAGAATCCATCTTTGGAGAACTTCAACTGGAGATACATTGTTGATGCTGAAGCACAGATCCGACTGCAACAGCTGCATAGTTGTactgatgtgaagctgctttcTCCCAGTCTGTGTGACTGGGTGTCGAGCTGTGGGATCCCTGGAGTCTATTCAGCCCATTCCGATGAAATACCATCAATCTATATCCGCCTGGTCAAACATTACATCTACCACAGGGTGGCCAGTATGATCTCCCAGTTCACAGAGGGACTGAACAGCTGTGGTGGATTGTGGGATACAGTAAAGTCCCACTGGGAGGAGTTTGTGCCAGTGATGACGAACGCATATCAGCAACCTCTGACCCTGGAAGAGTTCAAACTGCTATTCACCATCTGCTACAGCTGTCCAGACAGCCAGCTGAGGGTGGCTGAGGAGGCAACAGCTGGACACTGGGAAACAGTTCTCACCATGATCAGCGACGATGGGGCAGATCTTTCCTTTGAAGACCTCCTTGCCTTCATCATTGGAGCTGATCATCTGCCTCCTCTTGGGTTAACCAGATTGATCTCCCTGCGTTTTTACTCCCAGGATGCCAGCATGTCAGGGGGGTGTCTGCCGCACACCTCCACCTGTGCTCTGGAACTCTTTCTGCCGAGAGGAGTGGCAGGGGCTGCAGACCTGATGGTGTTGCTGAGCAGAGCCGTGCATGAGGCCCTCAGCTGTACACATTACCAGACAAAGGGAGATGGAGAGGGCAGCTGCATAGAAGTGATGACAAATTTATGAATTGGACCCTCGTCTGGACACTTGACATTTTGCTTTAGCTGACTTTGTGGAGTTGAAAGGTTTCTGCAGGATATGAAAAACGTGACTCAAAAGAACAATTAATGTACAATCAATGCTTATATATTTCTATATGctttataaaacaaattaaatgttgAATTTCTTTTCAAAGGATTTATTAAAGAACACAAAATTAACACAAAGAAGCCACTTTAAATATGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811353.1 True 2827 mRNA 0.48 15 9785792 9796989

Neighbor

gene id symbol gene type direction distance location
hps3 hps3 coding upstream 652 9766076 ~ 9785140 (+)
fnbp1l fnbp1l,LOC102783810 coding upstream 114004 9614795 ~ 9671788 (+)
LOC120566020 LOC103374322,LOC104940880,LOC103131468,LOC106964853 coding upstream 182217 9589156 ~ 9603575 (+)
depdc1a depdc1 coding upstream 198123 9575258 ~ 9587669 (+)
trnah-gug_12 NA coding upstream 213423 9572298 ~ 9572369 (+)
LOC120565621 NA coding downstream 54136 9851125 ~ 9865455 (+)
fxr1 fxr1,LOC106531534 coding downstream 170365 9967354 ~ 9979742 (+)
sox2 sox2 coding downstream 315993 10112982 ~ 10115322 (+)
kng1 NA coding downstream 643569 10440558 ~ 10450982 (+)
zmat3 zmat3 coding downstream 696540 10493529 ~ 10503066 (+)
G94266 bcar3,LOC102779191,LOC102207586,LOC101480816 non-coding upstream 92759 9691929 ~ 9693033 (+)
G94259 NA non-coding upstream 106055 9662132 ~ 9679737 (+)
G94238 NA non-coding upstream 234101 9547714 ~ 9551691 (+)
G94231 NA non-coding upstream 244733 9540537 ~ 9541059 (+)
LOC120566016 NA non-coding upstream 290435 9493981 ~ 9495357 (+)
G94373 NA non-coding downstream 104206 9901195 ~ 9902122 (+)
LOC120565916 NA non-coding downstream 111918 9908907 ~ 9912100 (+)
G94400 NA non-coding downstream 184433 9981422 ~ 9983844 (+)
G94405 NA non-coding downstream 386205 10183194 ~ 10183408 (+)
LOC120565491 NA non-coding downstream 407151 10204140 ~ 10297258 (+)
G94239 NA other upstream 228224 9552296 ~ 9557568 (+)
LOC120566011 NA other upstream 242257 9384505 ~ 9543535 (+)
G94199 LOC103367571,LOC102312400,LOC100710958,LOC101467655 other upstream 616915 9147162 ~ 9168877 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other upstream 1499356 8237370 ~ 8286436 (+)
LOC120565614 NA other upstream 1880545 7896145 ~ 7905247 (+)
G94281 NA other downstream 20632 9817621 ~ 9879198 (+)
LOC120565620 NA other downstream 47282 9844271 ~ 9846275 (+)
G94376 NA other downstream 105296 9902285 ~ 9903189 (+)
ttc14 ttc14 other downstream 136624 9933613 ~ 9948237 (+)
LOC120565490 NA other downstream 188730 9985719 ~ 10159881 (+)

Expression


Co-expression Network