LOC120565509 (slc25a42,LOC103371066,LOC103150429,LOC103463696)


Basic Information

Item Value
gene id LOC120565509
gene name slc25a42,LOC103371066,LOC103150429,LOC103463696
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 27513155 ~ 27520341 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811355.1
AAATACACAGTTCTTCTAGTCAGTTCTTTAAAACCTTGAAAAGCCCAATACATCTTGTGCGCAGAACCAGGCAGTGGCAGAGGCAGATGCAACATTTCCTCGCAGGCGATATAGTCCACGATCAACACACTCTCTGCTGCAGCTTGACACCCAGCTGTCTTTTACAATCAGCTTCAGAAACGTCAACAACGTGAAAGACGTGCAGACACCTCGCAGTCGCAGCGAGTTGCAAGCTTCAAGAGCAACTGACCTGCCTTCATCGATCAGTGAAGAAATGCGTGCGAGAATCTGCAGGGCAGACTGGCGACGGATCATAACACATCGCAGACTTGTAAACACGGGGTCCTTTTAAACACAAACGAAGtgTGTTTTCCTTGAATGAGCGGCCGAGCGTCTGACAGCCCTTGGTAACCTGTGAAGGGCACACATGGCCCACGGTGTAAACAACCATCAGAGCGCTCTGCCCGTGGCCCAGGCCGCCGTGCTGGCTCTGCCACCCTCCAGCCAAGCTAAGGACTTGAGGCCCAGATGGACAGTGCTGGACTCCCTGCTGTGTGGGGCATTTGCTGGAGCTGTAGCCAAAACAGTCATTGCACCTCTGGATCGGACCAAGATCATTTTCCAAGTATCCTCCAAGAGATTCTCAGCAAAGGAGGCCTTCAGGCTCATCTACTGCACGTACATGAAGGAGGGGCTGCTGGGTCTGTGGAGAGGGAACTCTGCCACCATGGTGAGGGTCATTCCCTACGCTGCCCTCCAGTTCTGCTCACATGACCAGTACAAAAAACTGTTGGGGAGCTACTACGGCTACCAGGGCAAAGCTCTGCCTCCTTTCCCACGCTTCCTGGCTGGCTCTCTGGCCGGCACCACTGCTGCGATGCTTACCTACCCTTTGGACATGGCGCGAGCCAGGATGGCAGTCACAGCTAGAGAAATGTACAGCAACATTATGCACGTCTTTGTGCGGATCTCCCAAGAGGAGGGTGTCCGGACCCTTTACAGAGGCTTCACTCCCACTATCATGGGTGTCATCCCATATGCAGGGATCACATTCTTCACATATGAGACCCTCAAGAAGCTACACACAGAAAAAACAAAGCGACCTCAGCCGTACCCCCACGAGCGCTTGGCTTTTGGTGCCTGCGCAGGCCTGATCGGACAATCTGCCTCATATCCCCTGGACGTGGTACGTCGGCGCATGCAGACAGCTGGCGTCACCGGCTCATCATACAGCACAATTCTGGGGACCATGCGTGAGATTGTAACACAGGAGGGAGTCGTACGGGGACTGTACAAAGGCCTGAGCATGAACTGGATTAAAGGACCCATTGCTGTGGGGATGAGCCTCACCACATTTGACATCACGCACAGCCTTCTGCTCAAATTGCATCAGATGGGCTACTCCGCTCACTGAATCATTGGGGAGCGACCAAAGGACAACAAAGAAGCACAGACTGACGAGAGGGAGATGGTCACCTCTGTCACatggcaataataataaaaaaaagactcagTCGGTACAGAGCCTTCCTGCTGCACACTCCTGTTCCCTTCAGACAGGATGTCAGAGGAGGGGATGAGTGGACAGGAGATCTGTTATGCACAAAGAAACACAGTTTCTCACACTTTGGTTAATGCACAGTCTGGATTCGCTGACAGAGGGTGAAGAAGTGTCTTTATATCGTTCACACAATCACAACTTTGTTTTGAAATCACGTTGCCATGGGGGTGGCTAAAGTGATTGGCAGAGGGACTGTGGATAAAGAAAAGTTTTGTTTTTCGTGGATAATAAGGAgcattttgtgttgtgttgataAGATCATGCTTGCACTTTATTAAACCTACAACGTTCTTTCAAACTAATCATGTACTCTTTACTGAGAGAACTTGTTTTTTAATTGcatagttgttttgttttttccgtttttttttttttttttttttatcatttcaaatAGCGTGGTCGTGCAGGGGTATGAATTGTAATAAAAGGGTGATTATGcaatatgttttgttttcattttcaatgttGTGATGGTGTTATGATGAATTGAGATTGATGGAGCGAATGATTGTAGGAGGGTGATCATGTCAGCTGGACTGCACAGTTTCACTGTCCATCCAGCACTGAGGAGGTGTGATATAGTATTAAAATGTCTAATAAGAGGCTAATCAaatgtatgagaaaaaaatctaTACGTATACAAAAGATTTTTGGTTAATGTGCACATTATTGAGAGGTTTTTGTAGTGTGTCCACATTGTTGTGCAGACTCCATCATTGCTTTTACAGTACATGAGGGTAAGGCAAACGTTGTTTGCCTGAAAAATCGAAATATGCCAAAGCACTAAACTCAGTCATAAGTTTCATGTGAATAAGGAGTAATTATACTTTGACTGCTAATGTACATTTCAAAGAAGCAGTATGTTTACAGTTACAAGTTAAACTGACTCTTCAATAAAGTGTCCATCCACAAC

Function

symbol description
slc25a42 Predicted to enable adenine nucleotide transmembrane transporter activity and adenosine-diphosphatase activity. Acts upstream of or within mitochondrial membrane organization. Predicted to be located in mitochondrion. Orthologous to human SLC25A42 (solute carrier family 25 member 42).

NR:

description
PREDICTED: mitochondrial coenzyme A transporter SLC25A42

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K15085 SLC25A42; solute carrier family 25, member 42

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811355.1 True 2477 mRNA 0.47 8 27513155 27520341

Neighbor

gene id symbol gene type direction distance location
midn midn,LOC101067279 coding upstream 365999 27120698 ~ 27147156 (+)
atp5f1d atp5d coding upstream 412899 27090223 ~ 27100256 (+)
polrmt polrmt,LOC101481838 coding upstream 577272 26878308 ~ 26935883 (+)
celf5a celf5,LOC102777648 coding upstream 788754 26522344 ~ 26724401 (+)
si:dkey-110c1.10 LOC100701936,LOC102208033,LOC101482435,LOC102800276 coding upstream 1133211 26350599 ~ 26379944 (+)
tmem161a tmem161a coding downstream 57633 27577974 ~ 27584940 (+)
tmem221 tmem221 coding downstream 85619 27605960 ~ 27611082 (+)
rfxank rfxank coding downstream 92511 27612852 ~ 27615467 (+)
si:ch73-63e15.2 sbno2 coding downstream 374375 27894716 ~ 27971455 (+)
tjp3 tjp3 coding downstream 452452 27972793 ~ 27997414 (+)
G98685 NA non-coding upstream 14268 27498223 ~ 27498887 (+)
G98663 yjefn3,LOC104950619 non-coding upstream 108318 27401644 ~ 27404837 (+)
G98654 NA non-coding upstream 117872 27394321 ~ 27395283 (+)
G98653 NA non-coding upstream 120189 27392273 ~ 27392966 (+)
G98652 NA non-coding upstream 133018 27379665 ~ 27380137 (+)
G98723 NA non-coding downstream 66084 27586425 ~ 27587108 (+)
G98763 NA non-coding downstream 328392 27848733 ~ 27848938 (+)
G98766 hapln4 non-coding downstream 335335 27855676 ~ 27859123 (+)
G98770 LOC104966597,LOC101073477 non-coding downstream 358976 27879317 ~ 27882311 (+)
G98972 NA non-coding downstream 792253 28312594 ~ 28318888 (+)
si:ch211-212d10.2 LOC103371119,LOC104950605,LOC100693321,LOC101487565,LOC102778050 other upstream 136101 27372809 ~ 27377054 (+)
micos13 LOC104918748,LOC103371279,LOC104964520,LOC106536194 other upstream 716868 26791729 ~ 26796287 (+)
LOC120565098 NA other upstream 1170862 26339543 ~ 26342293 (+)
zbtb7a zbtb7a other upstream 1217773 26283052 ~ 26295382 (+)
oaz1a oaz1,LOC104950707 other upstream 1473289 26034751 ~ 26039866 (+)
ncanb ncan,LOC104966594,LOC107554802 other downstream 139355 27659696 ~ 27832855 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other downstream 507623 28027964 ~ 28084387 (+)
LOC120564865 NA other downstream 616928 28137269 ~ 28146325 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other downstream 1252021 28772362 ~ 28774553 (+)
ralgps2 ralgps2 other downstream 1255034 28775375 ~ 28865487 (+)

Expression


Co-expression Network