echdc2 (echdc2)


Basic Information

Item Value
gene id echdc2
gene name echdc2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 28746989 ~ 28755022 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811386.1
TCTGTGGTGTGGTGCACTGCCTTGTGTCAACCTGTTGGCACTGCTGCTTTGAAAGGAAGGTCAGGAACAGCCAAGTCCCTCCTCTTACAGGAAGAAACCTGCACCAAATATCCTGCATCTCTTCCTGcttctaaaaaaaactaataaacagAGATTGAACAACCAGCATGGCAACTCTCCTTCGCAGACTGGCAGAGCCCATGTGCTTATCGAGGCGGTGGCTGGGAGTGATTCTTCGGGAAACTCATGGCCGAACTTCCCATTGCATCCCCCGGAACGGATCGCGACTGCTGCCCGGTGGCGGTCGCCCTCTGACGGTGTACAGCCGCAGGCAGCACACGGCGGCAGGTCCGGTGACGTTAGAGGTGGATATAAAGCGGCTAGAGGGGGAAGACAACGggATAGTAGAGGTGTTGATGTGCCGACACAAGGCAAAAAACGCTCTGGGCCATATGTTTGTGTCACAGATGAGGGAGCTGGTGTTCACTCTGTCCAATGACTCGGCAGCTCATGTGGTTGTCTTCAGGAGTTTAGTGCCGGGGGTCTTCTGTGCAGGTGCAGACCTGAAAGAGAGAGCTCAGATGAACCACCGTCAGTCTGATCTGTTTGTTCACGGCCTGCGTTCCCTCATGACTCAGATAGCATCGTTGCCCATGCCGACCATCGCGGCGATGGACGGCGTTGCCCTGGGAGGCGGTCTGGAGCTGGCCTTGGCCTGTGATCTCCGCACCGCTGcCTATTCTGCACAGATGGGTCTGATTGAGACGACACGGGGGCTGCTTCCAGGGGCGGgGGGCAGTCAGCGGCTGCCGCGGATGGTCGGCATCACTCTGGCCAAAGAGCTCATCTTCACAGGTAAGCGTGTGGGAGGTCAGACAGCTCTGGAGATGGGGCTTGTAAATAGAGCTGTAGAACAGAACCAGACAGGAGACGCTGCCTACAGAGAGGCATTCAGCCTGGCCAGAGAGATACTGCCACAGGCTCCTATCGCTGTGCGGCTGGCAAAAGAGGCAATAAACCGAGGCATTGAGGTTGACATGAGCTCAGCAATGGCAATAGAGAGGATGTGTTACGCTCGGGTCATCCCCACACGGGACAGACAGGAGGGAATGGCTGCCTTCTTAGAGAAGAGACCCCCGCGGTACACTGGGGAATAAAACTCTTTTGCACTGTTGGATTTCTCTCTCAcggacacacactctctccataACCTCGTGTCTGATAGACAattaacactgtgtgtgtgtgtgtgtgtgtgtcccagccagTATCAATACATTTAGTTAGGGTCAGGATGAGTTGTGTTTCCTTTTGTGACATTCAGGATGAGACATTGATTAAAACTATGGCACAAAAGTATGCTGGTTATTATTAAACTTGTGAATCTTATatttggaataaaaa
>XM_039811387.1
CTGTGGTGTGGTGCACTGCCTTGTGTCAACCTGTTGGCACTGCTGCTTTGAAAGGAAGGTCAGGAACAGCCAAGTCCCTCCTCTTACAGGAAGAAACCTGCACCAAATATCCTGCATCTCTTCCTGcttctaaaaaaaactaataaacagAGATTGAACAACCAGCATGGCAACTCTCCTTCGCAGACTGGCAGAGCCCATGTGCTTATCGAGGCGGTGGCTGGGAGTGATTCTTCGGGAAACTCATGGCCGAACTTCCCATTGCATCCCCCGGAACGGATCGCGACTGCTGCCCGGTGGCGGTCGCCCTCTGACGGTGTACAGCCGCAGGCAGCACACGGCGGCAGGTCCGGTGACGTTAGAGGTGGATATAAAGCGGCTAGAGGGGGAAGACAACGggATAGTAGAGGTGTTGATGTGCCGACACAAGGCAAAAAACGCTCTGGGCCATATGTTTGTGTCACAGATGAGGGAGCTGGTGTTCACTCTGTCCAATGACTCGGCAGCTCATGTGGTTGTCTTCAGGAGTTTAGTGCCGGGGGTCTTCTGTGCAGcCTATTCTGCACAGATGGGTCTGATTGAGACGACACGGGGGCTGCTTCCAGGGGCGGgGGGCAGTCAGCGGCTGCCGCGGATGGTCGGCATCACTCTGGCCAAAGAGCTCATCTTCACAGGTAAGCGTGTGGGAGGTCAGACAGCTCTGGAGATGGGGCTTGTAAATAGAGCTGTAGAACAGAACCAGACAGGAGACGCTGCCTACAGAGAGGCATTCAGCCTGGCCAGAGAGATACTGCCACAGGCTCCTATCGCTGTGCGGCTGGCAAAAGAGGCAATAAACCGAGGCATTGAGGTTGACATGAGCTCAGCAATGGCAATAGAGAGGATGTGTTACGCTCGGGTCATCCCCACACGGGACAGACAGGAGGGAATGGCTGCCTTCTTAGAGAAGAGACCCCCGCGGTACACTGGGGAATAAAACTCTTTTGCACTGTTGGATTTCTCTCTCAcggacacacactctctccataACCTCGTGTCTGATAGACAattaacactgtgtgtgtgtgtgtgtgtgtgtcccagccagTATCAATACATTTAGTTAGGGTCAGGATGAGTTGTGTTTCCTTTTGTGACATTCAGGATGAGACATTGATTAAAACTATGGCACAAAAGTATGCTGGTTATTATTAAACTTGTGAATCTTATatttggaataaaaa

Function

symbol description
echdc2 Predicted to enable enoyl-CoA hydratase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be active in mitochondrion. Is expressed in brain; otic vesicle; pronephros; and sensory system. Orthologous to human ECHDC2 (enoyl-CoA hydratase domain containing 2).

NR:

description
PREDICTED: enoyl-CoA hydratase domain-containing protein 2, mitochondrial

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811386.1 True 1404 mRNA 0.53 12 28746989 28755022
XM_039811387.1 False 1223 mRNA 0.52 10 28746990 28755022

Neighbor

gene id symbol gene type direction distance location
mmachc mmachc coding upstream 83711 28659938 ~ 28663278 (+)
LOC120565214 LOC103376736 coding upstream 97245 28639746 ~ 28649744 (+)
si:dkey-183n20.15 LOC104925996,LOC104959169,LOC100703951,LOC102207780,LOC101477488 coding upstream 161639 28577592 ~ 28585350 (+)
LOC120564927 LOC103354187,LOC101478050 coding upstream 181740 28552630 ~ 28565249 (+)
LOC120564926 NA coding upstream 223365 28521773 ~ 28523624 (+)
fam20b fam20b,LOC102783880 coding downstream 110621 28865643 ~ 28887058 (+)
agxta agxt,LOC102212595,LOC102798621 coding downstream 198353 28953375 ~ 28959096 (+)
dtymk dtymk coding downstream 204132 28959154 ~ 28966583 (+)
hdlbpa hdlbp coding downstream 287882 29042904 ~ 29065102 (+)
sox14 sox14,LOC101484987,LOC103365676,LOC104926635,LOC100695210 coding downstream 511340 29266362 ~ 29268436 (+)
G99108 NA non-coding upstream 58871 28687882 ~ 28688118 (+)
G99007 hook1,LOC102781169,LOC106584290 non-coding upstream 176131 28569648 ~ 28570858 (+)
LOC120565132 NA non-coding upstream 286779 28449543 ~ 28460210 (+)
G98972 NA non-coding upstream 428101 28312594 ~ 28318888 (+)
G98770 LOC104966597,LOC101073477 non-coding upstream 864678 27879317 ~ 27882311 (+)
G99189 NA non-coding downstream 215465 28970487 ~ 28972086 (+)
LOC120566147 NA non-coding downstream 237206 28992228 ~ 28992610 (+)
G99217 NA non-coding downstream 264513 29019535 ~ 29034406 (+)
G99238 NA non-coding downstream 401662 29156684 ~ 29157107 (+)
G99261 NA non-coding downstream 683140 29438162 ~ 29438722 (+)
LOC120564865 NA other upstream 600664 28137269 ~ 28146325 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other upstream 662602 28027964 ~ 28084387 (+)
ncanb ncan,LOC104966594,LOC107554802 other upstream 914134 27659696 ~ 27832855 (+)
si:ch211-212d10.2 LOC103371119,LOC104950605,LOC100693321,LOC101487565,LOC102778050 other upstream 1369935 27372809 ~ 27377054 (+)
micos13 LOC104918748,LOC103371279,LOC104964520,LOC106536194 other upstream 1950702 26791729 ~ 26796287 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other downstream 17340 28772362 ~ 28774553 (+)
ralgps2 ralgps2 other downstream 20353 28775375 ~ 28865487 (+)
G99297 NA other downstream 908611 29663633 ~ 29665090 (+)
si:ch73-389b16.1 ccdc18 other downstream 1672481 30427503 ~ 30429291 (+)
G99545 NA other downstream 2055496 30810518 ~ 30811236 (+)

Expression


Co-expression Network