LOC120565564 (LOC102210819)


Basic Information

Item Value
gene id LOC120565564
gene name LOC102210819
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1537999 ~ 1574777 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811453.1
atgggtcgtggctgggtcttccagCATGACAGCAACCCGAAACCCACTGCCCGGGCAACTAAGGAGTGGCTCAACCCCCGGAGAACTCCGCCAGACCCCCGCCAGACCCCCCAGACCCCCACCCCCGCAGACCCCGCGAGGCCCAGGACCCCCGCCCAGACCCCCCCCGAACTCCGCCAGACCTCCCGCAGCCCCGACCTCCGCCAGACCTCCCCGGCCCGAACCCCAGACCTCCGCCAGACCTCCGCCAGACCCCCGCCAGACCTCCGCCAGACCCCCGCCAGACCCCCGCCAGACCTCCGCCAGACCCCCGCCAGAACCCGGATGTTCCAGCTCCGAGACATGCTGCACCGCGACCCATGCAACAGtgaTCTGgatcgatgcatcacgatgaaacagaaacagaaaagtcCTGAGATCCTCCGTGACGGTTCTCGTCCCCGATTGGTCCGCCGGGTCTCCACCAACAGTCGGGAGCGTTGGCGGCAGCAGAACGTTAACGGAGCGTTCACCGAGCTGCGGAGTCTCATTCCCACGCACCCCCCCGACAGGAAGCTCAGCAAGAACGAGATCCTGCGTCTCGCTCTCCGGTACATCAGCTTCCTGGACCAGGTGCTGACGGACCAGGTGCTGACGAGCAGGTGCTGACGGACCAGGACCGGGCGGCGCCCCGGTGCCGAGCGGGTAGCGTGGACCAGGAAGACGCGTCACAGGGAACGATGTCGCCAAACTCTAGCTGTGAGAGTTCAGCGGACGGAGACTCGGACTGTGGAGGGCTTCTGCAGTTCCTCCACCTGGCGAGCAGCTACAGCTGATCAGACGGATCCAGCAGAGACCGGCAGGACGGGTCCGCCATATTGGCTCTGACAGGGGGCACATCACAGAAACTTCCCCGTCTTTTCCCAATTTGGTATTACAGAAGCTTTACTTCATCCTGTCTTATCGCAGGGTAGAAAATCCTAAAAACCGACATTGGTCTGGCTGGAAGGGATGCAGATCCTCGCACAATCTAGGgtcatataataatataatgttaATACTTTCactagggctgccacctcttagtctcct

Function

NR:

description
PREDICTED: T-cell acute lymphocytic leukemia protein 1 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811453.1 True 1071 mRNA 0.62 4 1537999 1574777

Neighbor

gene id symbol gene type direction distance location
LOC120566171 LOC108248660 coding upstream 157085 1322405 ~ 1380914 (+)
plppr3b NA coding upstream 512856 1010747 ~ 1025143 (+)
med16 med16 coding upstream 528786 983651 ~ 1009213 (+)
grin3bb grin3b coding upstream 582763 886359 ~ 955236 (+)
wdr18 wdr18 coding upstream 683501 832241 ~ 854498 (+)
LOC120565565 LOC108250349,LOC108249964 coding downstream 50797 1625574 ~ 1630680 (+)
sid1 NA coding downstream 61186 1635963 ~ 1637498 (+)
serpinc1 NA coding downstream 316777 1891554 ~ 1908999 (+)
LOC120565574 NA coding downstream 406061 1980838 ~ 1993868 (+)
dph5 dph5,LOC102795811 coding downstream 476185 2050962 ~ 2071903 (+)
LOC120565414 NA non-coding upstream 42632 1494808 ~ 1495367 (+)
G92080 NA non-coding upstream 61220 1458163 ~ 1476779 (+)
LOC120565412 NA non-coding upstream 101385 1433658 ~ 1436614 (+)
G92183 NA non-coding upstream 125128 1391329 ~ 1412871 (+)
G92076 NA non-coding upstream 130317 1356878 ~ 1407682 (+)
G92083 NA non-coding downstream 3742 1578519 ~ 1615013 (+)
G92195 NA non-coding downstream 7385 1582162 ~ 1582542 (+)
G92194 NA non-coding downstream 7867 1582644 ~ 1583710 (+)
G92213 NA non-coding downstream 10342 1585119 ~ 1586085 (+)
G92196 NA non-coding downstream 12960 1587737 ~ 1588264 (+)
LOC120565410 camk4,LOC102194929,LOC102785978 other upstream 2143 1463719 ~ 1535856 (+)
G92169 dbt,LOC102778223 other upstream 281805 1241387 ~ 1256194 (+)
trmt13 NA other upstream 309320 1220810 ~ 1228679 (+)
G92157 NA other upstream 333953 1202887 ~ 1204046 (+)
G92146 NA other upstream 367953 1168821 ~ 1170046 (+)
G92201 NA other downstream 4178 1578955 ~ 1910061 (+)
G92234 NA other downstream 122197 1696974 ~ 1804395 (+)
G92264 NA other downstream 292875 1867652 ~ 2000993 (+)
LOC120565570 NA other downstream 292944 1867721 ~ 1889087 (+)
LOC120565575 NA other downstream 414031 1988808 ~ 2025931 (+)

Expression


Co-expression Network