LOC120565613


Basic Information

Item Value
gene id LOC120565613
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 7263547 ~ 7285759 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811515.1
TAGCCTTCAAAACAAATGGACAGAGCTCCAAACCAGTTAAAATCCCCCTCCTCCGGAGCGGAGCGCAGCAGAGGGCGAGAGGGTCCAGCGCCGCTGTCCGGCTCAAACATGGCGGGCCGTGGAGGCGACGTGATGTGTTCGTGGTCCGGGTTCGGCTCTGCCACCGACCTCCCATCTGTAGCCGTGTCCGAGGAGCAGAAAccgaggaagagaaggagagctTTCTGCCTGAGCAGGATGAAGTCCCGCGGCAAACAGCAACAGCCCCAGCCCGccgcaaacaacaacaacatgccGTTCATGATGCACTGCCAGCTGGGAAAAGAGATCAAACACATCTGCCGCAACTGCCGGGGAGTGGAGCCGCTGGACGCTGAGGAAGTGGAGAGGTTGGCAGCGATGCGCTCTGATTCGCTGGTTCCGGGAACACACACGCCTCCCATTCGGCGGCGGAGCAAATTTGCCACCCTGGGACGTCTGTTCAAACCCTGGaaatggaggaagaagaagagtgaAACGTTCAAGCAGACCTCTGCGGTGTTGGAGAGGAAGATGTCCACTCGccagagcagagaggagctcATCAAGAAAGGAGTGCTGAAGGAGGTTTATGAGAAAGACGGCTCTTCCCCGGCTGTACGCGAGGATGCGAAGATGGAGAACGGGCGATCTCTGCTGCTCGCCTCCGCCATGTTGGAGTCTGAAGGCTCTCTGGAGTTCCAGATGCCAAGTGAGGGCGCGTGTCAACAGGACTACGGGCAAAAATCCACGGAGAAGTCCACTGTGTATCCGTCTGACGGCGCTGAATCAACGCTCTCCAGACCCCCCGCGCTACACAAACAACCTCCTGCGCTGCCACCCAAACCCTTCAACAGGCTACCTAATCACATCATAGACGGTGCCCCGGTGAAGTTGCCGTGTATGTTGTCGAAGTTGTCTCCTCCTCTACCTCCAAAGAAACTCATGATCTCCGTACCTGCAGGGAGCATGGAGCCCTCTTTGCTCGCCTTCCAGAAGTGCCCCCCTCCCAGCCACGCTCCAATGGGCGGGCACTCCCTGCAGTACGGGGCGCTACCCCTCCACCCCCCCAGCCGAATAATAGAGGAGCTCAACAAGACCCTGGCCCTGACCATGCAGAGGTTTGAAAGCTCCATGATGCACGCCGTTCCCACGGTGATGATCGAGTGTGACGACGACAAAGAGAACCTCCCCAACGAGGTGGACTACGAGGACCTGCctgacgaagaagaagaagaagaagaggagcaagaggaggaagaagacgaCGACGATGAGGAAGAcgaagatgaagaggaggaggatgatgatgatacatTGTTTACAaGCGTACTGGCCATGAAGGTTTTACGAAAGGACTCTCTGGCCATCAAGCTGAGTAACCGTCCATCGAAGAGGGAGCTGGAGGACAAAAACATCCTGCCGATGCAGTCGGACCAAGAGAGGTTCGAGTCTCGGCAACAAACGGCCACAAAACTGACCAGGCGATTAAGTCAACGACCGACAGCAGAGGAACTGGAACAGAGGAACATACTCAAACCTCGAAACGAtctggaggagcaggaggagaagagggagatcAAGAGACATTTGTCCAAAAAGGTAAGACAGAGTGGAGATGGACAGAGCGTCTCCACATCAGTGCAcatgcttaacccttgtgttgtcttcgcgTCAACCTTTAAAgGTTTCATCGGCCATAAGGTGGACTAG

Function

GO:

id name namespace
GO:0007166 cell surface receptor signaling pathway biological_process

KEGG:

id description
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811515.1 True 1731 mRNA 0.56 12 7263547 7285759

Neighbor

gene id symbol gene type direction distance location
igfbp3 LOC103358919 coding upstream 136275 7108149 ~ 7127272 (+)
si:ch211-191a24.3 LOC103358916 coding upstream 195613 7007170 ~ 7067934 (+)
si:ch211-191a24.4 LOC104966872 coding upstream 292247 6965547 ~ 6971300 (+)
ghrhrb LOC100710271,LOC101475240,LOC103357300 coding upstream 540270 6672071 ~ 6723277 (+)
cyldl NA coding upstream 622427 6627642 ~ 6641120 (+)
LOC120565797 slc22a23,LOC102794535 coding downstream 68089 7353848 ~ 7379344 (+)
LOC120566053 dusp22 coding downstream 112379 7398138 ~ 7413692 (+)
LOC120566212 irf4,LOC104941070 coding downstream 129682 7415441 ~ 7423820 (+)
foxq1b foxq1,LOC104946962 coding downstream 294433 7580192 ~ 7581837 (+)
foxf2b foxf2,LOC102792585 coding downstream 300382 7586141 ~ 7590299 (+)
G93906 NA non-coding upstream 27828 7233146 ~ 7235719 (+)
G93896 LOC102798054,LOC101466326,LOC100702846,LOC102303795,LOC102210503 non-coding upstream 106828 7156335 ~ 7156719 (+)
G93888 LOC104954812,LOC103358918,LOC104927721,LOC102210208 non-coding upstream 129115 7131348 ~ 7134432 (+)
G93851 NA non-coding upstream 132796 7127314 ~ 7130751 (+)
G93834 NA non-coding upstream 270385 6992856 ~ 6993162 (+)
G93931 NA non-coding downstream 33083 7318842 ~ 7321455 (+)
G93932 LOC103399850 non-coding downstream 36307 7322066 ~ 7323426 (+)
G93933 NA non-coding downstream 41412 7327171 ~ 7327686 (+)
LOC120566054 NA non-coding downstream 108614 7394373 ~ 7395278 (+)
G93985 NA non-coding downstream 239231 7524990 ~ 7525343 (+)
rhpn1 rhpn1 other upstream 881949 6354892 ~ 6381598 (+)
G93638 NA other upstream 1049530 6202085 ~ 6214017 (+)
G93613 NA other upstream 1212027 6035369 ~ 6051520 (+)
trmt1l trmt1l other upstream 2550314 4685224 ~ 4713233 (+)
LOC120565391 NA other upstream 2950032 4284755 ~ 4313515 (+)
G93938 NA other downstream 64051 7349810 ~ 7350587 (+)
LOC120565294 pycrl other downstream 593160 7878919 ~ 7890177 (+)
LOC120565614 NA other downstream 610386 7896145 ~ 7905247 (+)
G94073 rgs5,LOC107393027,LOC104951458,LOC100708109,LOC105932873 other downstream 951611 8237370 ~ 8286436 (+)
G94199 LOC103367571,LOC102312400,LOC100710958,LOC101467655 other downstream 1861403 9147162 ~ 9168877 (+)

Expression


Co-expression Network