LOC120565623


Basic Information

Item Value
gene id LOC120565623
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 10592837 ~ 10609226 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811527.1
ATGTACTGGGAGGAAAGTGGGGGAGTGGAGCTCTACATGGCCACTGCCAACAGCAGCATGGGGATGACGCTGAAGTGCAACTCCACCAACTCCACCTGCCAGTTCCCAAACTTGTACTGCGGGAAAACCTACACATTCTCTGTAACTGCATACAGTAAGATGTGCTACAGTGAAATCAGCAGAACGGTGGAGATTCAGACAGaccCCTGCCGGCCGACTGGCCTGACAGTCACTGGGTCCTGTAACAACGAGACGGTGGTGTTGGATTGGTTGGCGGCTCAAGGGGCATTAGCCTACGTGGTGACAGTCACAGGAGACCTGGGGTACGCCACAGCTTTCCAAACCAATATGACAACAGTAAGGGCTCAGCTGCCCTGTGGACAACTATTCATCTTCACTGTAACAGCTCAAGATGATCGATGTGACAGCGCTGTGAGCCTGCCTAAAAAATTCAAGACAGGTCCCTGCGTGCCTGAGCATGTAAAGAGCTTTACACAGTGTGAGAACAGTCTGGGCTCGGTCAGCTGGGGCAAAAGCGATGGAGCCGAGTCCTACATGGCCATCGCAATAGGACGTGACCTCCAAACCCACATGTGCACCACAAACACCACCAACTGCACCTGGGACGACCTGCGCTGTGGAGAGCAGTACACAGTTCACGTCATTGCCAACGACTACCTGTGCAGCAGCATGCCGAGCAACAGCACTTCAATACGAATggCACCATGTATTCCTCAGAACTTGACATCATCTCTGAACTGCACAATGAAgGTGGGATCGCTGACCTGGAATGCCAGTCAAACTGCTGAGTTTTACGTTGTGACGGCAACGACCAACAATGGCCACCAAGTGCAGCTTAGCACCAACGACACCTGGACCTTCATTTCTGAGTTCATGTGCGGCCAGGAGTACTTCCTGTCTGTTCAGGCAGTAGACTCTGTGTGCACAAGCCTCCCCAGTCAGCCATCAAAGCTCGAGTCAGAGCCCTGTCCTCCTACCGGCGTCTCCAGCTTCATGAACTGCCTCTCTAACATCGCTGTGGTCTCGTGGTACAGCTCGGCTGGGGCGGACTTCTACACCGCCACGGTGACACAGGGAGACGGCCAATCACAGAGCTGCTGGTCTGACAGCGAGAAGTGTGGCATGCCCAACGTCAACTGTGGACAGAACTACACAGTGACGGTCGTCGCCTCGAATGAGAATTGCAACTCTGACACGAGCCAGGCTGACACACTGCAGTCAGTGCCCTGTGTTCCTACTGGCGTGGATGTGAAGATGGACTGCTCTACTAATAAGGCTCTCGTGTCCTGGATTTCCAGCAAGGGCGCCCTATCCTACAAAGTGACGGCTCAGAGCACACAGGGAGCCATGTCCTTCTGCCATAGTACAAACCTAATGTGCACCTTGGCCAACCTGACCTGTGGGCAGGACTACTCTGTCCAGGTGGTGGCGCAGGATGATATTTGCTCAAGTTTACCGAGCCCAGCTACAAAGTTCGCATCAGtTCCCTGCACACCTAGCATCGGCTCAGTGGTTCTGGACTGCTTCACCAACTCGGCCCTCTTGGACTGGGCCCACGCCGAGGGTGCCCTGAACTACACCGCTACAGCCCAGACCTCTAGCGGCCATGTTTCCACCTGCACCTCCAACATCACCAACTGCGAGCTGATGGACCTGCAGTGTGGTCAGACCTATAATGTTTTCACTGTGGCCTCAAATGAAAATTGCAGCAGCCCTCCAAGCACCATGTTGCAGGTGGAGTCAGTGCCTTGTCTCCCTGGAGATGTTGTGACCGTACTGAACTGCTCTACCAACACAGCCCTTGTGAAGTGGCAGGCCAGCATAGGGGCCGATTACTATATTGTCCAAGCCTTCGGTGTGGAAGAACATGAATCTGGCTGCGAGACAGACACGCAGTCCTGCGTCCTCCCAGACCTTATGTGTGGCTTCACCTACAACATCAGTGTGATTGCTGTCAATAGCGTGTGCAATGTATCgcagagtgacatgacacagcTGCAAGCAGTGCCCTGTGTACCACAGCAGGTGAAGGCCCAGGTGGTTTGTAATTCTGGCGCTGTGGCGGTCTCCTGGGAGCCCAGCAATGGGGCATCATTATACACCACAGTTGCCCAGGGCAATGGCGGCTACGCGTCAACGTGCAAGAGCAACGGGACAGCATGCCTCTTCAATGATTTGCTGTGCGGCCTAAACTACTCCATCACTGTTAGTGCTTCAGATGAGAAGTGTAGCAGCGCTAGAAGCTCTGCTGTGCAGCTCAACACAGtGGCGTGCGTACCAAGGAATGTAACAGCAAAGATGGTGTGCAGTAATAACACAGGCGTTGTGTCATGGGAAGGAGAGGGTGTGTCCTCCTACATGGTGAAAGCTTTTGGGCTCGATGGCCACAAGATACAGTGTAACACCACCACAACCAGTTGCCAGCTACCCAACATGCATTGTGGCCAGCTCTACAACCTGACAGTAACAGCTCAGGATGGACTGTGTGACAACAGCCGTGCCTACCTCAACCTGCAGTCAGTGCCTTGCAGGCCAACCTACGTCAAGGCTTCCCTATTGTGCTACTCAAACTCTGCTGCAGTGACATGGGAGCAAGCCAGTGGAGCGCTCTCCTATCTTGCCGTGGGTGTTACAGCAAACGGAAGCCACCAGACTGAATGTAACAACACCATGACCTACTGTACTCTGAGAAACCTGCAGTGTGGACAGACCTACAATGTGAGCGTGTTCAGCCAGGATGAGTCCTGCTCCAGTGTGGCGAGCGACAAGGCTTACATGCGGACAGcCCCCTGCGCACCCCAGGATGTGGCTATTAATACACAGTGTGATGATGGTGCCATGAACGTGTCATGGTCCCCCAACCCCGACGCCCAGTACTTCCATGTAGCAGCAGTGAGCAACAACTGGGCAATACTCTACTGTAACTCCAGTAACACTTATTGCAACATAAGGGGTTTACCATGTGGACAGAAATACAACGCGACTGTGCTGTCCGTGAGAGATGACTGTGAGAGTAAGCCCAGCGCTGTGGTAAAGACTTCCTCAGCTCCGTGTGTGCCCAAGAACGTGGAGGGCCATCTGGACTGCGTAACAAACTCTGTTTGGGTGACGTGGGACGCCTCAGAAGGAGCTCTCAGCTACTTTGTGCGGGCCAAAGGGGTCGGAGGTCACAACTCCAGCTGCACTACCACCTCCTCTCCCTGTAATGTCCCAGATCTGAAATGTGGAACGCGTTACACCTTCCACGTCACTGCTGTCAACAAATACTGCAACAGCAATCACAGCACCCCCTTTGAGCTTGAGACAGGTCCCTGTGCTCTAACATCCGTTAGTGTAGTGACAGAATGCGACAACGACACAATCCTGGTTAACTGGGAGATGACGAAGGACGCACCGCTCTACCTTGTGACCGCTGAGGGCAATGACCAAAGCCTCATATCCTGTAACAGCTCCTCCAACTCATGTGTACTCCCAGATATCCGCTGTGACATGCATTATAGCATCATAGTATCAGCTTCTTCTGATAAgtgcagcagcctcagaagcCCACCAAAGAAGATCATAACAGCGCCCTGTGTCCCACACAACGTGACAGTGTTAGCATCATGTGAGAAGAATGGTGCCACAGTGACGTGGGGACAATCCCCTGTGGCTACATCCTACCTTCTGACAGCCACAGGAAGGGATGGACATGTTGCAAGCTGCAACACCTCAGTAAACAACTGCAATCTGACTGATCTGCACTGCGGACAGACGTACAGCTTAAACATCACTGCCAGTGGAGACAACTGCACCAGCAAGCCCCGCACTTCATCCTTCAGAACAGTGCCCTGTAATTCCTCTGGCCTCGCTGTGGATATTAATTGTGAGACCCACTCTGCCATGCTGTCTTGGGGTGCCAGTGAGGGCGCTGTGGAGTATTTTGGCTTTGCCCAAGCTTTGGATGGAAAGATGCTCTACTGCCACAGCACTGTCCCCTTCTGCACCATGGAAGACCTGGAATGTGGTCACGTTTACAATTTCTCTGTTAAAGCCTCAAATGGTGTCTGCAACAGCTCGCTCAGTGCACCTCTGCAGGCGGGAGCAGCTCCATGCGCTCCGACTGCTCTGAAAGTCCAAATGCAGAAGATAGGCCAAGCTCACTGGGCCATGACGTCATGGGACAGCGTCAATTGTTCTGACGTAGAGTACCTTGCGGAGATAACCGGTCGAATCCAGAACAACCCACAAGCCCTGATGGAGGTCTTTTCCTACTGGCTGCCCAGGAGATACTTTGAGTTCCCAATGCCTTGCAGCACAGCATATAACCTGACTGTACGCGCCAGAAACTCAGGCGGGGTCAGCAAGCCATCCACTGCCTTTACTGGAGTCACAGTCCCCTGTTCTCCACAGAATGTGAGATACAGTGGGAACAGAGACTCTGCTGTGCTTTCCTGGGATGCATCAGTGTTTGCCACAAGGTACACTGTCTACAGTGTGTCGGGGTCAGGCCGTGTCCAGCTTTGCAACACCACTGGGCTCTACTGCCAGCTGACCAACTTCTATCCTAACGCCACTGAAGTGACAGCAAGCAACGCAGCGGGAGAGAGCATCCCTAACCAAAATATTACAGGTCCAGTACAAGCTCGCAGAAGAAGAGATTTGCGGACCAGTGAAATCTTTGCCCATTTTGACAAAGatctTGAAACCCCAGCAGTGACTGTGACAGTAAGTGGAGTTTCCTTGTATGTGAATTGGACGACCGTGAAGGATGCGACAGAGTACACGGTTGTGATTGAGGAGGAACAGAAAGACCAGGAGGCCATTCAGCCACCTATAGTGAGAACCACGGAAGGTAATTTTTACAAAGTGACTGACCTCAAGCCTTGGACCACCTACTGCATCAGGCTGGCCGCCAAAAACACCATCAAGCAAAGCAACTACTCCATTAGGCCAATATGCAGAAGCACTGGTGCCTCCAAATGAACCACAGATCCACTTAATAAACAGACACTGGACTCGGCAGAAATAAGGGTTATAGGTTTGTTTTCTTCACTCTGTAGCATCCATAACATAACTGTCAACAGTTCAATCTCTAAAAACTTTAGAAggaaaattgtaaaaagaaagTAATTACAACTACAAAGCTACGGCATCATTCTTCTGTTTGGGGTATATCTTACATACCACGAATAAATTGTGATCAAACCTGAGGAGAACCTTTAGATTTGAATGCTTATGAATCTTTGTTAGCAATAGCATatatacattttcattattttggcTGGTATCATAGCATAACAATGTATTGCTGAAATTCTATTTATCAAAAAATGGTTTTATTTTCGAGATAGGTTATTAAGATTCTCTGGATGATTGTTAAACTAAAAAAGTAGTGTAAACAAATAAACTCATAATTTATCAAGCAATATTTTTTGAAACCATGCAGTATATTTCCTTTTTGATGTACTGTACTATGTGACTTCTCATTTTGTGAACACGTtgacagatcttttttttttaacagatgaaggaataaaaaaaaaaaaaacatctgtgaaACAATAAAACTCCCCTCTGTTTAAACATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811527.1 True 5591 mRNA 0.50 21 10592837 10609226

Neighbor

gene id symbol gene type direction distance location
LOC120565703 NA coding upstream 38985 10543708 ~ 10553852 (+)
zmat3 zmat3 coding upstream 89771 10493529 ~ 10503066 (+)
kng1 NA coding upstream 141855 10440558 ~ 10450982 (+)
sox2 sox2 coding upstream 477515 10112982 ~ 10115322 (+)
fxr1 fxr1,LOC106531534 coding upstream 613095 9967354 ~ 9979742 (+)
henmt1 NA coding downstream 8149 10617375 ~ 10627039 (+)
slc25a24 slc25a24,LOC104951356,LOC104935995 coding downstream 44413 10653639 ~ 10668886 (+)
LOC120565966 LOC101466472,LOC102777579,LOC108238401,LOC101066382,LOC106527066 coding downstream 72313 10681539 ~ 10691086 (+)
tm4sf18 LOC100702951,LOC102305373,LOC101466751,LOC102228636,LOC103155263,LOC104936000,LOC103374892,LOC105936905 coding downstream 86797 10696023 ~ 10714882 (+)
LOC120566058 LOC103374891,LOC102305063,LOC100702684,LOC101467020 coding downstream 113676 10722902 ~ 10733961 (+)
G94515 NA non-coding upstream 61456 10530696 ~ 10531381 (+)
G94450 NA non-coding upstream 83299 10507652 ~ 10509538 (+)
G94426 NA non-coding upstream 187604 10339236 ~ 10405233 (+)
G94427 NA non-coding upstream 234049 10346197 ~ 10358788 (+)
LOC120565491 NA non-coding upstream 295579 10204140 ~ 10297258 (+)
G94587 NA non-coding downstream 101977 10711203 ~ 10711496 (+)
G94604 NA non-coding downstream 339277 10948503 ~ 10948822 (+)
G94609 NA non-coding downstream 354322 10963548 ~ 10977065 (+)
G94613 NA non-coding downstream 387251 10996477 ~ 10997201 (+)
G94674 NA non-coding downstream 492102 11101328 ~ 11101569 (+)
atp11b atp11b other upstream 178011 10363462 ~ 10414826 (+)
LOC120565490 NA other upstream 432956 9985719 ~ 10159881 (+)
ttc14 ttc14 other upstream 644600 9933613 ~ 9948237 (+)
G94376 NA other upstream 689648 9902285 ~ 9903189 (+)
LOC120565620 NA other upstream 746562 9844271 ~ 9846275 (+)
G94598 NA other downstream 307699 10916925 ~ 10941244 (+)
si:ch211-162e15.3 LOC103376230,LOC100712485,LOC108238459,LOC102795316,LOC102207055 other downstream 337706 10946932 ~ 10948316 (+)
LOC120565923 LOC103370579,LOC100695501,LOC102794561,LOC101470646,LOC102226407,LOC102291616 other downstream 750464 11359690 ~ 11458146 (+)
znhit6 znhit6,LOC102790327 other downstream 1179909 11789135 ~ 11821882 (+)
lrp8 LOC103355569 other downstream 1552412 12161638 ~ 12443080 (+)

Expression


Co-expression Network