LOC120565628


Basic Information

Item Value
gene id LOC120565628
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 16458187 ~ 16459800 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811532.1
ATGAGCTCCATAAGATTTACAACTGAAGAAGTTTTAGCACAGATCTTTGATGGAAATAGTGATGTAGAGGAAGAGGTTTCAGAGTCAGAGGATCTTTCCGAGACTGAGGACAATGCTATTGACGATCCAGATTGTGAATTTTCCTATGATGAAGAGGATTCAGACGACCACTCTGCCGTAGTCTCTCCATCAGCTGAAAACAATGGGCAGCAATCATCTTCAACAGAGGGGACATGGACATCTAAAGATGGTAACATAAAATGGTCAACATCACCACACCGAAGCCAAGGCAGACTGTCATCTTCCAATGTCATCAAAATGACTCCAGGCCCTACAAGATTGTCTGCCACACGAGTTGATGATATTCAGTCAGCATTTCATCTCTTCATATCCCAACCAATAGAGAGGATCATACTGGACATGACCAACTTGGAGGGGAGGCGTGTATTTCAAGAGAAATGGAAGCCACTGGATCAGATTGACTTGCATGCATACATTGGAATCCTGGTATTAGCTGGAGTGTACAAGTCAAAGGGAGAAGCAACTGCCAGTCTGTGGAATGAAGAGAGTGGAAGGCCGATCTTTCGAGCAACCATGTCTCTGGAGTCATTTCATATGATATCTCGGGTGATCCGGTTTGACAACCGTGACACCAGAGCTGGTCGAcgtgaaagagacaaacttgCTGCGATCAGAGATGTATGGGATAAATGGGTCGAAATTCTACCTGTGTTGTACAATCCTGGTCCCCATGTCACTGTAGATGAACGCCTTGTTCCATTCAGGGGACGGTGTCCCTTCCGACAGTACATGCCCAACAAGCCTGCCAAGTATGGTATCAAAATATGGGCAGCGTGTGATGCCAAATCTAGCTATGCATGGAATATGCAAGTGTACACCGGAAAGCTACCTGGAGGAGCATCTGAGAAGAATCAGGGGATGCGTGTTGTGCTGGAGATGAGTGAAGGGCTGCAAGGTCATAACATCACCTGTGACAACTTCTTCACATCTTACCGCCTTGGAGTTGAACTTCAGAAGAGAAAGCTGACCATGGTCGGAACAGTCAGAAGAAATAAGCCAGAACTTCCCAGTGAAATTCTGAAGATTCTGAAGCCACAAATGATCCTGGACTACAACTCCAACAAAGGAGGAGTTGACAATCTGGACAAAGTCACAGCAACATACAGCTGCCAGCGCAAGACTGCACGTTGGCCCTTGGTGATTTTCTACAACATTGTGGACGTGTCTGCTTACAATGCCTATGTCCTGTGGACTGAAGTCAACCAGCAATGGAATGCTGGAAAATTGTACAAACGTCGGCTTTTCCTGGAAGAGCTTGGCAAAGCACTCGTCACTCCCAAGATCCAGAGGCGAGACCGGCCAGCTCGatccccagcagcagcagctgtcatTCAAAAGGTTCAAGCTCAGTCATCCAACCCCCCATCCAACCAACCTGCAATGGGTCCAGGAGATACACCTGTAAAGAAACGGAAAAGATGCCAGGTCTGTCACCCCCGAGAGGACAGTAAAACAAGCACCTCTTGTGTGAAATGCAAGAATTTCATCTGCAGAAAGCACACTGTTACATTCTGCCCATCATGCGGAGAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811532.1 True 1614 mRNA 0.47 1 16458187 16459800

Neighbor

gene id symbol gene type direction distance location
uhrf1 uhrf1,LOC102797162 coding upstream 140689 16301923 ~ 16317498 (+)
ccdc124 ccdc124 coding upstream 169286 16285698 ~ 16288901 (+)
cluap1 cluap1 coding upstream 173202 16278045 ~ 16284985 (+)
slc5a5 slc5a5,LOC104958014 coding upstream 182492 16256858 ~ 16275695 (+)
LOC120565304 b3gnt3 coding upstream 232725 16216296 ~ 16225462 (+)
ptprsa LOC103355422,LOC108234298 coding downstream 466819 16926619 ~ 17177885 (+)
tbxa2r NA coding downstream 746970 17206770 ~ 17217790 (+)
si:zfos-943e10.1 LOC103364910,LOC104945262,LOC104928005 coding downstream 776574 17236374 ~ 17255548 (+)
ddx59 ddx59 coding downstream 878025 17337825 ~ 17343549 (+)
kif14 kif14 coding downstream 884365 17344165 ~ 17369090 (+)
G95952 NA non-coding upstream 288343 16166202 ~ 16169844 (+)
G95929 NA non-coding upstream 330247 16070354 ~ 16127940 (+)
G95877 NA non-coding upstream 476689 15980690 ~ 15981498 (+)
G95876 NA non-coding upstream 477561 15979752 ~ 15980626 (+)
G95873 NA non-coding upstream 483837 15973181 ~ 15974350 (+)
G96070 NA non-coding downstream 43345 16503145 ~ 16503811 (+)
G96075 NA non-coding downstream 133076 16592876 ~ 16593182 (+)
G96076 NA non-coding downstream 216407 16676207 ~ 16676577 (+)
G96086 NA non-coding downstream 312169 16771969 ~ 16772170 (+)
G96088 NA non-coding downstream 418076 16877876 ~ 16878081 (+)
kdm4b kdm4b,LOC104945107,LOC108234360,LOC108412081 other upstream 81738 16320494 ~ 16376449 (+)
kcnn1b LOC104945110,LOC103355562 other upstream 157187 16289823 ~ 16301000 (+)
LOC120564959 LOC104946909,LOC103360792,LOC102294988,LOC101486556,LOC102197099 other upstream 825375 15523929 ~ 15632812 (+)
dennd1b NA other upstream 1534342 14810368 ~ 14923845 (+)
LOC120565380 NA other upstream 1753834 14689382 ~ 14704353 (+)
nppc nppc,LOC104932751,LOC103372810 other downstream 1395831 17855631 ~ 17859411 (+)
nmur1a LOC103368681,LOC104952433 other downstream 2186903 18646703 ~ 18665113 (+)
G96418 tsc22d2 other downstream 2322800 18782600 ~ 18785636 (+)
G96513 NA other downstream 3070967 19530767 ~ 19531677 (+)
prkacba prkacb other downstream 4089199 20548999 ~ 20564824 (+)

Expression


Co-expression Network