abhd17ab (abhd17a,LOC102787648,LOC100697085,LOC102288803,LOC101468085)


Basic Information

Item Value
gene id abhd17ab
gene name abhd17a,LOC102787648,LOC100697085,LOC102288803,LOC101468085
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 25468399 ~ 25476235 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811561.1
CGGACGCGGCAGCGAAGAAGGAAAACACCGCACGTAGCTACTACATGGATTCATTGGAATGACAAGACGCCATCCATAAATTCCGAGGAGACGGCAGCACCTTCCAGAGTGGATTCATGAAGACGAATACACCCGTCGGAAACGATGTGTTAACGGTGTTTTACGTCGGGTGTCCGCGAATAAGcgttgttattattttttttactgagtagccgtgtttttgttttcttgctaGCTTAAGCCAGCGTAGCGTTAGCTGCTACGCTTGTCCTTATTCTTGATATATCACTCAATTAGTACAGGAGGAGACGGTGCTGTGCGTGTTTGATTGCGATTGACAAGCGTTCAGGATTTgctttttttggtcactttgcAAGGTAGACCGCTTTGGAAACGCTCGTTCCTCACTGTCAAAGACAAGTAAGTTACAAAAGTGATAGTTTACCTAAAAATATCCAGGGCACGTTTGGGGAAACAAACATTGTGTCTGAAGTGACTCGTCAACGTCTCAACAAATGGACAAAATGGATGTGATCTGGACTTCAGTCCCCACACAGGCAACACAGCAGATACTTTGTAAATAACACTTCCTTGTCAGTCTActactttctcctcctcctcctcctgctgacAGGGCAACTTTACAAACAGTATCCTGTTTTGGAATTTGACTGAAGTGGAGGAAGTCttccttgttttatttttgttttgggcGCAACTTCTTTTTGACTTTAACTTAGGCTAGGCTCTTCAGCTCAACAGTGAAGGATGAATGGTCTCTCTTTCGGCGAGCTCTGCTGCCTGTTCTGCTGCCCGCCCTGCCCCGGCCGCATCGCAGCCAAGCTCGCCTTCCTGCCCCCTGAGCCCACGTACGCCTTTCTTCCAGACCCAGAGGCAGTCCCTGCTGCACCTGGGGCAACGGGGACATCCAGCCTGCGGGCGCGGAGCATTGCATCAGTTGCTGGAAGCGGAGGGGCCGTGCCCTTGGATGGGAGGTGGAAGCTCCACCTGACAGAGCGAGCAGAGTTCCAGTACTCGCAGAGAGAGCTGGACACGACAGAGGTGTTCCTCACACGGTCCAGCCGAGGAAACCGAATCGGCTGCATGTACATTCGCTGTGTCCCTAATGCCAGATTCACAGTGCTCTTCTCCCACGGCAACGCCGTCGACCTGGGCCAGATGAGCAGTTTCTACATCGGCCTCGGCACCCGCATCAACTGCAACATCTTCTCCTACGACTACTCAGGCTACGGTGTCAGCACTGGCAAGCCCTCTGAGAAGAACCTCTATGCAGACATAGATGCTGCCTGGCACGCCCTGCGCACACGGTATGGCATCAGCCCAGAGAATATTATCCTGTATGGACAGAGCATTGGTACAGTACCCACTGTAGACCTGGCGTCACGGTACGAGTGTGCCGCCGTGGTTCTTCACTCACCTCTAACATCTGGCATGAGAGTGGCCTTTCCTGACACAAAGAAAACGTATTGCTTCGACGCGTTCCCCAACATTGAGAAAGTGTCCAAAATCACATCCCCGGTGCTCATCATCCACGGGACAGAGGACGAGGTCATTGACTTCTCCCATGGCCTGGCTCTGTTCGAGCGCTGCCCCAAGGCTGTGGAGCCTCTCTGGGTGGAGGGAGCGGGACACAACGACATTGAATTGTACAGCCAGTATCTGGAGCGCCTGCGCCACTTCATAGGACAGGAGTTGGCGGTACAGCACGCCTGACCGTCGCCACCAGGATCATCATCAACGTCATCATTACCATTTTTCCGTGTCCAAGATGGAGACGTGTCCAAGAGTCATCTCCCTCCGCTTACCACTGCTCCCGGGGCTTTAACGCTTCGCATACTGCAGTGCTTTATTCCCGGGGCACAGTACGCCTTTAATGGACCATGGTATGATGCGACATGGAGACAACAAGTGTGTTCATAAACTCCCGGAAGTGCGTGAGTGTGAAAATCTTCACAACTGCATTTTtagactgttttgtttttctttcttctttttctttttttagcagTTACTTTAACAGTACAGCTGCCATGTGTTACGTGGCAGCAAATATATTCCGATGCTGTGCAATAATACGGACAGTGTCCACAGGAAAAAATACTTCAAATGATTAAAAGGAGAtttaacacaacaacaaactcaTAAGTAATCATGTAGATCAATTACATTGTGGTCCGCATGAACATTTTCCATCAATTTTCCAGCCTACTCATAGTTTGTGTGTAACTTTTAATTGGATGGTTAAATGGTAATGGTGGAGAATGGGGAAACACTAAAGAAGACTCTCAAAAGTGCTTGTGACACCTGTTGGGGAATTTTTAAGTTTTCTCATGATCAGAATAGCAGGTTTGTAACTAAGTTCTCTGCGGTTTCTGTTAGTATGCCCTGTCCAATTTTTAATGCAATCCAAATTCAAAGCACTACAGCCGTGTTTccattcacacttttttttgcgTATTTCAAAGTTTTGGGATTCTTTTTTCAATAGGCCCAACCTAGAATAACAGaatccttaaaggaacacgccgacttattgggactttagcttattcaccgtaacccccagagttagataagtccatacatacccttcatatctctgtgttgta

Function

symbol description
abhd17a Enables palmitoyl-(protein) hydrolase activity. Involved in protein depalmitoylation and protein localization to membrane. Located in endosome membrane; nuclear speck; and plasma membrane.

NR:

description
protein ABHD17A-like isoform X1

GO: NA

KEGG:

id description
K01076 ABHD17; abhydrolase domain-containing protein 17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811561.1 True 2630 mRNA 0.48 5 25468399 25476235

Neighbor

gene id symbol gene type direction distance location
zgc:77486 LOC104918432,LOC103358789,LOC101467589,LOC102787348,LOC100705167 coding upstream 1396 25457253 ~ 25467003 (+)
plin3 plin4 coding upstream 11240 25444399 ~ 25457159 (+)
mpnd mpnd coding upstream 240118 25219482 ~ 25228281 (+)
LOC120565286 LOC103358799 coding upstream 289646 25096838 ~ 25178753 (+)
ssbp3b ssbp3,LOC100703237 coding upstream 384477 25069211 ~ 25083922 (+)
npl npl coding downstream 125646 25601881 ~ 25613413 (+)
sec22bb LOC104918424,LOC104948961,LOC100705437,LOC106584381,LOC103354218,LOC106613829 coding downstream 177627 25653862 ~ 25663704 (+)
notch2 LOC104948964,LOC103354216 coding downstream 202301 25678536 ~ 25729476 (+)
rex1bd clg23h19orf60,LOC104918420,LOC103354213,LOC102791516,LOC102205217 coding downstream 272640 25748875 ~ 25755656 (+)
tmem59l tmem59l,LOC104948969 coding downstream 293758 25769993 ~ 25784438 (+)
G98163 NA non-coding upstream 209913 25253473 ~ 25258486 (+)
G98123 NA non-coding upstream 235999 25229382 ~ 25232400 (+)
G98128 NA non-coding upstream 276561 25191064 ~ 25191838 (+)
G98033 LOC104965512 non-coding upstream 578023 24885420 ~ 24890376 (+)
G98021 NA non-coding upstream 592733 24837613 ~ 24875666 (+)
G98177 NA non-coding downstream 3113 25479348 ~ 25479604 (+)
G98186 NA non-coding downstream 35621 25511856 ~ 25512252 (+)
G98188 NA non-coding downstream 38815 25515050 ~ 25515742 (+)
LOC120565050 NA non-coding downstream 44637 25520872 ~ 25521287 (+)
G98196 NA non-coding downstream 81878 25558113 ~ 25608391 (+)
elovl1b LOC106963699,LOC101078639 other upstream 594483 24852287 ~ 24873916 (+)
G98012 dmbx1,LOC103373966,LOC108230579 other upstream 684518 24781918 ~ 24783881 (+)
LOC120565649 LOC103373964,LOC107081966 other upstream 703174 24749017 ~ 24765225 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other upstream 1260258 24204341 ~ 24208141 (+)
cdc34a cdc34,LOC103368917,LOC104923648,LOC103397164,LOC107393183,LOC103156874 other upstream 1817886 23631119 ~ 23650513 (+)
G98194 NA other downstream 56590 25532825 ~ 25547089 (+)
slc35a3a slc35a3,LOC101471768,LOC102790943,LOC100705874,LOC108230529,LOC103354215,LOC106515047 other downstream 253990 25730225 ~ 25738789 (+)
dot1l dot1l,LOC102793654 other downstream 515271 25991506 ~ 26019371 (+)
oaz1a oaz1,LOC104950707 other downstream 558516 26034751 ~ 26039866 (+)
zbtb7a zbtb7a other downstream 806817 26283052 ~ 26295382 (+)

Expression


Co-expression Network