LOC120565667 (hrh4,LOC104967234,LOC100712525,LOC102292561,LOC101478323)


Basic Information

Item Value
gene id LOC120565667
gene name hrh4,LOC104967234,LOC100712525,LOC102292561,LOC101478323
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 37983334 ~ 37984742 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811592.1
ttaagtgattttatttcatttttaagtttttttttttggtggttttAATTTGGTAAACAACTGACAATGGTTTAAGATGGGCTTGCACACAGGTGTTTATAGACATTGCAACTGTCTTTTTAATTTTGAATGCTTTTAATATTTGCTTTAAATATTACGTTTTGGAAGTAATGCGCTGAGAAACCCGTCAATGTAATTCAACACATGTTCAAATTGCCTCGGAAATGCGTAGGGTATTATGAAATGTAATATTCGACCTTCTCAAAATCGTCGCCGTaagacatttattttgaaaatatgaGTGGATATAGTACCTATTTTCTCTTCTGGCAGTCTTGACATTGGTGACAAAATCCACTGTGCGCTCCGCGGTAGCGCACACCGGGCAGCCAGTACTGTTAATGCACCGGCTGactagagaggagagagagagagagagagagagagagagagagagagagcacccACAGGACCTACAATAttatcattaaaaaaattaagcTTTCAATTAAACTCTCTTAATCTCAGAACTATTCCGGAGAAATGGAAGATTTGGGGAAAGTATTTCCATTTAACCACAGGTCTCCATACATGTTTGACTCCTGGGTAAAGTGGAGCGGAACGTTGGCGGGTCGCCTAATTGGATGTGTTCGTTGTTCCTGTGCGTGAAATGAAAAAGGTCTACAATGATTTTGGCTTCCTATTAACTATGGGCGCGCATATTCTGGACTCAAATTCCAGCGGCAACCTGACTCCTGCGGTGTACGAGGCTGGGACCGTCCTCCCGGGCCACCTCGCGGTGATCTTATCGGTCCTCATGGTGACTCTGGTGGTCGTCGTGGTGGCAGGGAACGCGCTGGTCATcatggcttttgttgtggataAAAGTCTGAGAACTCAAAGCAACTACTTCTTTCTGAACCTTGCTATATCCGATTTTCTCGTGGGTGAGTTGGttccccctcctcttcttctttgtgtCTCCTCTGTCAGTCTATTCTccatatcaataaaaaaaatatcactaTTTCTACACGCCCCAAACACATTGCAATCTTCATTCATTGATGAGTTTATAGTGACCTTGCCGTCCTTTTTGCTTCATtgatgtgtaatgtaatgtatgttaTTTGTAGCATCCCTCTGTTTTATTTTAGAAAGGCATTCACATCTCTGTTATTGTGCTGCTCCTTTCCGCAGCATTAGATACATTATATAAGTCTCTTTAATGAGACAACCAATAGGCTGCTCTTGtttctaaaatatattttaccttACCTCTGCAGGGCAGCAACcagtcatttttttgtcacatgtaATGATCCCCACATCCAGGCTGTCTGGAGAGGTGTGCATGTTATTACAGTtttggttgggggggggttgAATCGTTatgcagtgtgtgtctg

Function

symbol description
hrh4 Predicted to enable G protein-coupled acetylcholine receptor activity and G protein-coupled serotonin receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway; chemical synaptic transmission; and inflammatory response. Predicted to be located in membrane. Predicted to be active in dendrite and synapse. Predicted to be integral component of plasma membrane.

NR:

description
PREDICTED: LOW QUALITY PROTEIN: histamine H3 receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811592.1 True 1409 mRNA 0.42 1 37983334 37984742

Neighbor

gene id symbol gene type direction distance location
lama3 NA coding upstream 68287 37890292 ~ 37915047 (+)
cts12 LOC104962698,LOC103357414 coding upstream 93445 37883875 ~ 37889889 (+)
LOC120566157 plekhb2 coding upstream 128975 37850073 ~ 37854359 (+)
LOC120566156 plekhb2,LOC106613863 coding upstream 133734 37843726 ~ 37849600 (+)
cep19 cep19,LOC102796355 coding upstream 145229 37836407 ~ 37838105 (+)
LOC120565755 LOC103357426,LOC102194044,LOC102293839,LOC102798827 coding downstream 108284 38093026 ~ 38136180 (+)
nrl LOC104947091,LOC103357430,LOC105353878 coding downstream 183719 38168461 ~ 38178363 (+)
LOC120564983 LOC100690982,LOC103357424,LOC102799593,LOC101477196,LOC104919101 coding downstream 194289 38179031 ~ 38188686 (+)
ppat ppat coding downstream 214254 38198996 ~ 38209487 (+)
aasdh NA coding downstream 233073 38217815 ~ 38235264 (+)
G100978 NA non-coding upstream 10143 37956604 ~ 37973191 (+)
G100963 NA non-coding upstream 109599 37871456 ~ 37873735 (+)
G100956 NA non-coding upstream 143803 37838902 ~ 37839531 (+)
G100940 NA non-coding upstream 165577 37817373 ~ 37817757 (+)
G100938 NA non-coding upstream 169294 37813783 ~ 37814040 (+)
G101066 LOC108281047 non-coding downstream 13713 37998455 ~ 37998703 (+)
LOC120565003 NA non-coding downstream 28447 38013189 ~ 38015274 (+)
G101080 NA non-coding downstream 61302 38046044 ~ 38046823 (+)
G101081 NA non-coding downstream 72846 38057588 ~ 38062672 (+)
G101130 NA non-coding downstream 215827 38200569 ~ 38201905 (+)
G100843 NA other upstream 493262 37463914 ~ 37490072 (+)
prrc2c NA other upstream 1024974 36932655 ~ 36958360 (+)
G100671 NA other upstream 1284465 36695437 ~ 36698869 (+)
sass6 sass6,LOC102776185 other upstream 1371588 36596041 ~ 36611746 (+)
smim24 NA other upstream 1448752 36495484 ~ 36534582 (+)
usp46 usp46 other downstream 881693 38866435 ~ 38880605 (+)
prdm5 prdm5 other downstream 1338842 39323584 ~ 39361733 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other downstream 1469378 39454120 ~ 39464450 (+)
reps2 reps2,LOC102792668 other downstream 1576319 39561061 ~ 39592762 (+)
LOC120565298 cdkl5,LOC103356958 other downstream 1709170 39693912 ~ 39740277 (+)

Expression


Co-expression Network