LOC120565674


Basic Information

Item Value
gene id LOC120565674
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 4515052 ~ 4519593 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811597.1
ATTTACAGCGAGGCAGAAGTTGGAGATCACTGACTTTATACCAGCTGAATGATGAGTGCTGCTCAGAGTCAAACAACGCTGGAGTCCAAACTGGAGGCCCTGCAGTGCCACTTCACCTGGGATCTGGAGACCAGCAAGTCCATGCTGTTACGTCGCAAGGACAACCTGGAGGACATCGGCACCGAGGAGGGGAACAGCTGGCTGGGTCACATTTACAACCTGCGGGGGTTCATTCAGTACAAGCTGGGGTTCACCGAAGACGCCCAGAGTTTCTTCAACAAGGCTGCAGAGGCCTTCAGCAAGATAAGAAACGCAGATGAGGGTCCCTGGTTGGTGGTGAACTACGGGAACCTGGCGTGGCTGCACCACCACCTGGGAGACCAAGCAGAGAGTCAGGCTTACCTGTCAAAGGTCAACGCCCTGATGAATAAATACCCATCTCCATCCCAGGATGAGCTTGATCCAGAGATCTACGCTGAGAAAGGCTGGACCCTGATGAAGTTCAGCAGAGAACAAAAGAAAGAGGCTGCAGATTACTTCCAGAGAGCCATCAGGATGCAGCCGGACATGGTGGAGTGGAACACCAGCTACGTCTTAGAGTTAATGTATGATTTCAGGGAAAACAACGAGGGGCAGGAGGCTGACATTTTGGATAAAATGAGAACTGCCAAGGAACAGGATCCAGAGAACTTGTACCTCGCTGTTCTCTACCTCGAGCAATGTacaaagaaaggagaaagaatCGAAGATGAAGCACGTGAGTTGGCAAGAAAGGTTTTGAGAAATCCTGTCAGCAGCTACagtggtattaaaccattactaaGGGTTTACTTAAACCATGTATCTATTGATGAAGCCATTGATTTGGCAGAGGAGGCTCTGGGAAAACATCCAGATAAGCGTCATCTTAAGAAATGTTGCGCATTCTGCTACAAATGGAAGATCTTCAGGGAAAGCCCAGAGCAAAGCCTGATAGACAGAGCAATCAGTCTCCATGAGGAGGTGATTTCTCTTTACCCTGATTCTTCACTTGTGAAGGAAATAAACCTCGCAAAGATATACTCAAATTTAAATAACAGCCAGGATAAAGTTGAGCAGATATACCAGGAAGTACTAGAAAGAGATCTGGAACCTCTAGACAAACAGATGATTTACAGCACCTATGCAAAACATTTATCATGGAATCGACAAGACAGTGGAGGGTCAGTACGATATCACATGAAGGTGGCAAAGATACCACAAGAATCTATATATCGGGAGACCAGCATCAAAACCCTGAAGAAGATTAGAGACAGAGGCAGGAGCCACATGTGTAGAGAAATAGAGGAGTTTCTGGAAAACCTGCCAGAGCCATAGTGTTTTTCACATTCGCCCAAAGCAAAGCGTGATAGACAGAGCAATCAGTCTCAATAAAGAGGTGATTGCTTTTTACCCTCCTTCTTTCCTTATGAAGAAACTAGAACTCGCAAATATCTATATGCAAAATTAAATTACACCCAGGAAAAAGCATAGAAGTAATACCAGGAACTGATCTGGAACCTGCAGACAAACAGATGTTTTGTAAGGCTTCTATGCAAAATATTTAAACTGTAATCGTCAGGAGTACCAAAGGGTCAATACTTGAAGCAGTAGTACCACATCGATCCTCCTCTCGTTGTAACAGCATCACAACTCTGAAAAAGATTAAAAGACAGAGACAAAACCCAATGTGTAGAGAAATAGAAGAGTTTCTGGCAAACCTGCAAGAGCCATAGTGTTATTAAAAGCACTGGTTCTAAATCCAGATTAAGTGTAGGTACACACATGACATTATATTGATTACAGTCATCAGGAAAACCTGTTTCCTTCTGTTGGTCTGCTGGTCCAGAAGCAGCAACACCTTATTCAGAACATGTACGATCAACtagttgttggttttggtcttttaatgGTTATCACAAAGATATGTATCATATAAAGACAACTGTGTGCGCTTTAGTACAGTTAATAGAAGACAAAGActcttatgtgtgtgttgttatgtgtGCACCATAGTGTAGCACTTTTAATTTCGTTGTATGTACTTACAATGAGAATAAAGTCAATTCTGAttctgtttcaaaataaaaataactttaacaTTGACTCTGAAACCTGTCAGCAGTAGTACACTAGATCTGTATCAAACAAGCTGAATCATTTAATAACACTGGTCCTTTAAATAACATCCACTGTGGACATGTTCAGATGTCATTACATAATTAATTCATATATATTTTGATCAGATGTTTTTCTTAACTTTATCACGGTGTTTATTATATTCCTGTTGTGTTAATTGTTTTCATGTTTAAGTTTAAATAAGTACATAATACTGTGTGTATGAAGTTTGCTTTGCTGTCAGAAATATAAACAGTTGTTAATGTAATAGTTAATTTGATGTATAACCTGAATAGATCGCCATTTGTAGCCTACACAATACTATTAAATATACATTATATGAACTAAGAAA
>XM_039811598.1
ATTTACAGCGAGGCAGAAGTTGGAGATCACTGACTTTATACCAGCTGAATGATGAGTGCTGCTCAGAGTCAAACAACGCTGGAGTCCAAACTGGAGGCCCTGCAGTGCCACTTCACCTGGGATCTGGAGACCAGCAAGTCCATGCTGTTACGTCGCAAGGACAACCTGGAGGACATCGGCACCGAGGAGGGGAACAGCTGGCTGGGTCACATTTACAACCTGCGGGGGTTCATTCAGTACAAGCTGGGGTTCACCGAAGACGCCCAGAGTTTCTTCAACAAGGCTGCAGAGGCCTTCAGCAAGATAAGAAACGCAGATGAGGGTCCCTGGTTGGTGGTGAACTACGGGAACCTGGCGTGGCTGCACCACCACCTGGGAGACCAAGCAGAGAGTCAGGCTTACCTGTCAAAGGTCAACGCCCTGATGAATAAATACCCATCTCCATCCCAGGATGAGCTTGATCCAGAGATCTACGCTGAGAAAGGCTGGACCCTGATGAAGTTCAGCAGAGAACAAAAGAAAGAGGCTGCAGATTACTTCCAGAGAGCCATCAGGATGCAGCCGGACATGGTGGAGTGGAACACCAGCTACGTCTTAGAGTTAATGTATGATTTCAGGGAAAACAACGAGGGGCAGGAGGCTGACATTTTGGATAAAATGAGAACTGCCAAGGAACAGGATCCAGAGAACTTGTACCTCGCTGTTCTCTACCTCGAGCAATGTacaaagaaaggagaaagaatCGAAGATGAAGCACAACTTCACACCGGACGATGATGGACGTTAACCAAACTATAACCTTTGAAAACTGCTgccaaattgtttttttaactttcaacATGGATGAGCatcaaacaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811597.1 True 2488 mRNA 0.41 2 4515052 4519428
XM_039811598.1 False 859 mRNA 0.49 3 4515052 4519593

Neighbor

gene id symbol gene type direction distance location
LOC120565669 NA coding upstream 71528 4439340 ~ 4443524 (+)
prpf38a prpf38a,LOC107731643,LOC107684051 coding upstream 95271 4408643 ~ 4419781 (+)
LOC120564977 zgc:110434,LOC102204254,LOC103462478,LOC107386469,LOC101485372,LOC103381127,LOC103379246,LOC103395676 coding upstream 140298 4373826 ~ 4374754 (+)
LOC120565398 LOC108262407,LOC104935308,LOC104932967 coding upstream 148491 4366122 ~ 4366561 (+)
LOC120565392 LOC103395674,LOC105891059,LOC101167724,LOC101068541,LOC105888650,LOC105896821,LOC106527799 coding upstream 169923 4344659 ~ 4345129 (+)
LOC120565681 NA coding downstream 79879 4599472 ~ 4603153 (+)
LOC120565686 LOC104953734 coding downstream 138168 4657761 ~ 4662185 (+)
niban1a LOC104958505 coding downstream 195062 4714655 ~ 4784151 (+)
mettl11b mettl11b coding downstream 333355 4852948 ~ 4873356 (+)
gorab gorab coding downstream 415168 4934761 ~ 4946307 (+)
G93286 NA non-coding upstream 9078 4500549 ~ 4505974 (+)
G93288 NA non-coding upstream 13000 4496053 ~ 4502052 (+)
G93293 NA non-coding upstream 47741 4461129 ~ 4467311 (+)
G93294 NA non-coding upstream 49618 4460271 ~ 4465434 (+)
G93281 NA non-coding upstream 101131 4413261 ~ 4413921 (+)
G93308 NA non-coding downstream 72783 4592376 ~ 4606793 (+)
G93323 NA non-coding downstream 173130 4692723 ~ 4759060 (+)
G93327 NA non-coding downstream 191681 4711274 ~ 4785944 (+)
G93332 NA non-coding downstream 225687 4745280 ~ 4750169 (+)
G93335 kifap3 non-coding downstream 278818 4798411 ~ 4805232 (+)
LOC120565391 NA other upstream 201537 4284755 ~ 4313515 (+)
G93150 NA other upstream 297226 4174602 ~ 4217826 (+)
frem1b LOC100693369,LOC101486624,LOC102206675,LOC102294239 other upstream 691270 3714919 ~ 3823782 (+)
G92848 NA other upstream 908227 3600978 ~ 3606825 (+)
LOC120565459 NA other upstream 919664 3540034 ~ 3595388 (+)
trmt1l trmt1l other downstream 165631 4685224 ~ 4713233 (+)
G93613 NA other downstream 1515776 6035369 ~ 6051520 (+)
G93638 NA other downstream 1682492 6202085 ~ 6214017 (+)
rhpn1 rhpn1 other downstream 1835299 6354892 ~ 6381598 (+)
G93938 NA other downstream 2830217 7349810 ~ 7350587 (+)

Expression


Co-expression Network