LOC120565681


Basic Information

Item Value
gene id LOC120565681
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 4599472 ~ 4603153 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811606.1
AGTATTACAAGTTTAGATGTGACTTCTGTTGCTGGGAAATGAGCATCAAGCCGTGTTGAGACAGCACTGAAGACTTTATATGCAAAAGCCACACCTCAGACTTTTCTCTTCAAAGCAGCATCAGGTGCAAATCTAACTCATATTTAGGTCGAGGAGGAAACAGCTGAATGATGAGTGCTGCTCAGAGTCAAACAACACTGGAGTCCAAACTGGAGGCCCTGCAGTGCCACTTCACCTGGGATCTGGACCCCAGCAAGTCCATGCTGTTACGTCGCGAGGAAAAGTTCGAAGACATCGGCACCGAGGAGGGGAACAGCTGGCTGGGTCACATTTACAACCTGCGGGGGTTCGTTCAGTACAAGCTGGGGTTCACCGAAGACGCCCAGAGTTTCTTCAACAAGGCTGCAGAGGCCTTCAGCAAGATAAGAAACGCAGATGAGGGTCCCTGGTTGGTGGTGAACTACGGGAACCTGGCGTGGCTGCACCACCACCTGGGAGACCAAGCAGAGAGTCAGGCTTACCTGTCAAAGGTCAACGCCCTGATGAATAAATACCCATCTCCATCCCAGGACCAGCTCCATCCAGAGATCTACGCTGAGAAAGGCTGGACCCTGATGAAGTTCAGCAGAGAGCAAAAGAAAGAGGCTGCAGATTACTTCCAGAGAGCCATCAGGATGCAGCCGGACATGGTGGAGTGGAACAGCTGCTACGTCTTTGGGTTAGTGTATACTTGTGATCACAGCGACACAGGGCAGGTGGCTGACCTTCTGGAGAAAATGAGAATCGCCAAGGAACAGGATCCAGAGAACATGTTCCTCGCTGTTCTCTACCTTGAGCAATGTGCAAAGAAAGGAGAGATAATCAAAGAAGAAGCACGTGAGTTAGCCAGGAAGGTTTTGAGAAATCCTGTCAGCAGCTACAGTGGTATTATACAATTACTATATGTTTACAGATACCATGTTTCTATTGATGAGGCCATTGATTTGGCAGAGGAGGCTCTGAGAACCCATCCAGATGAGCGTTATCTGAAGAGATGTGCTGCACTCTGCTACAAATGGAAGATCATGTATGTCAGGGACAGTCGCCCAAATCCAAGCGTGATAGACAGAGCAATCAGTCTCCATAAAGAGGTGATTGCTCTCTACCCTCATTCTTCACTTGCAAAGAAAATAGAACTCGCAAGTATATACGCAAAGTTAAATTACAGACAGGTTGAAGCTGAGCAGATGTACCAGGAACTGCTAGAAAGTGATCTGGAACCTGCAGACAAACAGATGATTTACAACATCTATGCAAAACATTTATTCTACGACCGACAGTACGACAGATCAACACGAaatcacatgaatgcagcagcgATAACGCATCAATCCTTCTATCGTGAGAACAGCATCACAACTCTGAAGAAGAACAGAGGCAGGAGCCACATGTGGAGAGAAGTAGAGGTCTTCCTGGCAAACCTGCAAGAGCCATAGTGTTTTTAACAGCACTGGTTCTAAATCCAGAAATGTATTACACATCAGGAAACCCTGTTTTCTTCTGTTGTTTGTCTGGGCAGCAACACTCCTTCAAAGGCGTCACAGGATTACTTTGCTTCCATTGGCTCTTAAGAGACAACAATGTTAATATGGAGGATAGTTTTACTcagaatttaaattaaaaagggaaaaaggcaCTGACACAATACTCAAAACATGTTTCAACTCATTGttggtttttgtcttttcttgttATTGCAAAGATGAGATGTATCCTTAAAAGGCAGGTTTTTACACTTTGCCCGAGCCAACTTTTCATGTTTGTTTCAAACAAAGTGTGTTGATTGGCTATTGACTATGTTATGTGGTCATCTGTTAAGTAACAACTAATAGACTATTAGGTTGCCTCCATAgacatttataataataatggacaaatagtccGGGCCTGAAGATTGAAGCCAATGCGGAGATGCCTTAAAGCATGGAAGACAAAGGctgtttaaaattaaaaaaattgtacATTTTTCCTGATAAACGTCAGCAGTAAAATTAATATTGAGCAGAATTGAGTTTAGGATAGTGGTCCGGCCCTCCACAACAGTCCCTGTTTCTCATGTGGCCCCTTGGGAAAATGAATTGCCCACCCCCGCTAGATATATGACAAGCTGAATCATTTAATAACACGGGTCCTTTAAATATCATCCACTGTGGACATGTCATTACATGATTAATTCAACGATTTTGATCAGATGGTTTTCTTTACCGCAGTGtaacataataacataataCTCTCTTGTTAAAATTGGCTTTGctttaagaaaaataaatggttGGTAAAATGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811606.1 True 2325 mRNA 0.43 2 4599472 4603153

Neighbor

gene id symbol gene type direction distance location
LOC120565674 NA coding upstream 79879 4515052 ~ 4519593 (+)
LOC120565669 NA coding upstream 155948 4439340 ~ 4443524 (+)
prpf38a prpf38a,LOC107731643,LOC107684051 coding upstream 179691 4408643 ~ 4419781 (+)
LOC120564977 zgc:110434,LOC102204254,LOC103462478,LOC107386469,LOC101485372,LOC103381127,LOC103379246,LOC103395676 coding upstream 224718 4373826 ~ 4374754 (+)
LOC120565398 LOC108262407,LOC104935308,LOC104932967 coding upstream 232911 4366122 ~ 4366561 (+)
LOC120565686 LOC104953734 coding downstream 54608 4657761 ~ 4662185 (+)
niban1a LOC104958505 coding downstream 111502 4714655 ~ 4784151 (+)
mettl11b mettl11b coding downstream 249795 4852948 ~ 4873356 (+)
gorab gorab coding downstream 331608 4934761 ~ 4946307 (+)
prrx1b prrx1 coding downstream 363406 4966559 ~ 5000440 (+)
G93286 NA non-coding upstream 93498 4500549 ~ 4505974 (+)
G93288 NA non-coding upstream 97420 4496053 ~ 4502052 (+)
G93293 NA non-coding upstream 132161 4461129 ~ 4467311 (+)
G93294 NA non-coding upstream 134038 4460271 ~ 4465434 (+)
G93281 NA non-coding upstream 185551 4413261 ~ 4413921 (+)
G93323 NA non-coding downstream 89570 4692723 ~ 4759060 (+)
G93327 NA non-coding downstream 108121 4711274 ~ 4785944 (+)
G93332 NA non-coding downstream 142127 4745280 ~ 4750169 (+)
G93335 kifap3 non-coding downstream 195258 4798411 ~ 4805232 (+)
G93345 NA non-coding downstream 290165 4893318 ~ 4893706 (+)
LOC120565391 NA other upstream 285957 4284755 ~ 4313515 (+)
G93150 NA other upstream 381646 4174602 ~ 4217826 (+)
frem1b LOC100693369,LOC101486624,LOC102206675,LOC102294239 other upstream 775690 3714919 ~ 3823782 (+)
G92848 NA other upstream 992647 3600978 ~ 3606825 (+)
LOC120565459 NA other upstream 1004084 3540034 ~ 3595388 (+)
trmt1l trmt1l other downstream 82071 4685224 ~ 4713233 (+)
G93613 NA other downstream 1432216 6035369 ~ 6051520 (+)
G93638 NA other downstream 1598932 6202085 ~ 6214017 (+)
rhpn1 rhpn1 other downstream 1751739 6354892 ~ 6381598 (+)
G93938 NA other downstream 2746657 7349810 ~ 7350587 (+)

Expression


Co-expression Network