LOC120565686 (LOC104953734)


Basic Information

Item Value
gene id LOC120565686
gene name LOC104953734
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 4657761 ~ 4662185 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811612.1
ccttttatatatgtcaatggtgtgCACACAGCTCCCCGCCAAGTTGTATATGGTTAATGTCGCCTGTTACTTTAGATTGAATAAGTTCCACATTGGTTTTCTGGAAGTTTATCAATAACCGCTTGGATTCATAAAGTAGGCCTCAGGACTCCTCATATATTTCAACATGGTGTCAGAAGAGGGATGAATTCATCGCCTCCAAGTTCCACGTGACTTTTTGTTTTCGTCTCGAGCGGACACACAACTCAGTAGAAATAATGGCGGATGGATTCCGCAGACCAGACCCCGTCGTTTTTGACGGGAACGTGGCCGAGAATTGGCGGATTTTTGAACAGGATTATGATATCTTCATAGCAGCGGCGCACTCGGACAAGCCTGCCAAAACAAAAGCGTACATCCTGCTTAATCTCGCGGGACCGGAGGCCATCGAACGGGAGCGCTCGTTTGTTTACGCGGCGGAGGTGAGGGCGCCCGGTGGAGACGGAGCCGTCGTGGTTCCAGCTGAATCCAGAGAAAACCCGGAGTGTTTGAAACGGAAATTTCGTGAAGTGTGTAACcctcaacaacacaacaacaaaaccatgGAGAGACACAAGTTCCATTCACGAAATCAAAAGCAAGGTGAGACTATTGAGTCCTACGTCAGTGACTTGAGGATCAAAGCTGAAAGTTGTCACTTTGGAGACCTGACGGAGGAACTGATTTGTGACAGAATAGTGTGTGGCATCAGGAATGACAACATAAGAAAGGCGTTGCTACGTGACAGTGAATTAACCCTAACGAAAGCCATTGCTATCTGCCGCATGTATGAAATGACTGAGGAGAATAATAAGGCTCGAGCCCAGCCCCAGACGGCCGAGGCGGGTACGGCTGCAGCCCGCAGCGTCCCATGTCACGCAGTCCCGTCTCATGCCGAGGCGTGTCCAACGGTACACATcagtgtctttaaaaaaaataacacacccCCGGTGACACGATGCACGGTGTGCTGTACCGACCATCATTGCCCCCTTTGCCCCACTTCCATATACAAGCCCCGGTGTAGGGCAAAGGTTTTGCAGCACATGGAGGTGCATGTAAAGAATGCCATTCAACATGAAGATTTCTTCATAACAAAATGCCACCAGGCCTGCAGGAGTGGAAGCAGTGGTCACTTCCACTGCCCTTTCTGCCTCAAGACCACAATAAAGAGGCAGGCCATACTGAGGCATTTGCAGATCTGTAGGCCACCTCTCCATGACGCCCAGCTGGACGCTgatgcagactgcagagagatGGGCGTCAATTCCCAGACAGAGGAGTGCAAAGCAGGATCTGTGAGCCTACCTCATATCAGCTCTGACAAACTGCCTGAACCGgTACATGATGGTGAAATACAAGGACAAAGAGACCCAGCAGAGAGACCCCAAGACCCAAGGATAAGGAGGAGGCAAAGAGGCCCAGGACAATCCCTCCTCAACAGTCGGAACCTGTTGACCTGACTATGGAGGGGATTCACACACACCcggtccgagacccggtgctaatacggcaccggtgccttaacgaccgttatctaccggaccgaatagcaacgcagattccGGTGCCttatttcggtgccacttaaatgcctgcg
>XM_039811614.1
ccttttatatatgtcaatggtgtgCACACAGCTCCCCGCCAAGTTGTATATGGTTAATGTCGCCTGTTACTTTAGATTGAATAAGTTCCACATTGGTTTTCTGGAAGTTTATCAATAACCGCTTGGATTCATAAAGTAGGCCTCAGGACTCCTCATATATTTCAACATGGTGTCAGAAGAGGGATGAATTCATCGCCTCCAAGTTCCACGTGACTTTTTGTTTTCGTCTCGAGCGGACACACAACTCAGTAGAAATAATGGCGGATGGATTCCGCAGACCAGACCCCGTCGTTTTTGACGGGAACGTGGCCGAGAATTGGCGGATTTTTGAACAGGATTATGATATCTTCATAGCAGCGGCGCACTCGGACAAGCCTGCCAAAACAAAAGCGTACATCCTGCTTAATCTCGCGGGACCGGAGGCCATCGAACGGGAGCGCTCGTTTGTTTACGCGGCGGAGGTGAGGGCGCCCGGTGGAGACGGAGCCGTCGTGGTTCCAGCTGAATCCAGAGAAAACCCGGAGTGTTTGAAACGGAAATTTCGTGAAGTGTGTAACcctcaacaacacaacaacaaaaccatgGAGAGACACAAGTTCCATTCACGAAATCAAAAGCAAGGTGAGACTATTGAGTCCTACGTCAGTGACTTGAGGATCAAAGCTGAAAGTTGTCACTTTGGAGACCTGACGGAGGAACTGATTTGTGACAGAATAGTGTGTGGCATCAGGAATGACAACATAAGAAAGGCGTTGCTACGTGACAGTGAATTAACCCTAACGAAAGCCATTGCTATCTGCCGCATGTATGAAATGACTGAGGAGAATAATAAGGCTCGAGCCCAGCCCCAGACGGCCGAGGCGGGTACGGCTGCAGCCCGCAGCGTCCCATGTCACGCAGTCCCGTCTCATGCCGAGGCGTGTCCAACGGTACACATcagtgtctttaaaaaaaataacacacccCCGGTGACACGATGCACGGTGTGCTGTACCGACCATCATTGCCCCCTTTGCCCCACTTCCATATACAAGCCCCGGTGTAGGGCAAAGGTTTTGCAGCACATGGAGGTGCATGTAAAGAATGCCATTCAACATGAAGATTTCTTCATAACAAAATGCCACCAGGCCTGCAGGAGTGGAAGCAGTGGTCACTTCCACTGCCCTTTCTGCCTCAAGACCACAATAAAGAGGCAGGCCATACTGAGGCATTTGCAGATCTGTAGGCCACCTCTCCATGACGCCCAGCTGGACGCTgatgcagactgcagagagatGGGCGTCAATTCCCAGACAGAGGAGTGCAAAGGATCTGTGAGCCTACCTCATATCAGCTCTGACAAACTGCCTGAACCGgTACATGATGGTGAAATACAAGGACAAAGAGACCCAGCAGAGAGACCCCAAGACCCAAGGATAAGGAGGAGGCAAAGAGGCCCAGGACAATCCCTCCTCAACAGTCGGAACCTGTTGACCTGACTATGGAGGGGATTCACACACACCcggtccgagacccggtgctaatacggcaccggtgccttaacgaccgttatctaccggaccgaatagcaacgcagattccGGTGCCttatttcggtgccacttaaatgcctgcg
>XM_039811615.1
ccttttatatatgtcaatggtgtgCACACAGCTCCCCGCCAAGTTGTATATGGTTAATGTCGCCTGTTACTTTAGATTGAATAAGTTCCACATTGGTTTTCTGGAAGTTTATCAATAACCGCTTGGATTCATAAAGTAGGCCTCAGGACTCCTCATATATTTCAACATGGTGTCAGAAGAGGGATGAATTCATCGCCTCCAAGTTCCACGTGACTTTTTGTTTTCGTCTCGAGCGGACACACAACTCAGTAGAAATAATGGCGGATGGATTCCGCAGACCAGACCCCGTCGTTTTTGACGGGAACGTGGCCGAGAATTGGCGGATTTTTGAACAGGATTATGATATCTTCATAGCAGCGGCGCACTCGGACAAGCCTGCCAAAACAAAAGCGTACATCCTGCTTAATCTCGCGGGACCGGAGGCCATCGAACGGGAGCGCTCGTTTGTTTACGCGGCGGAGGTGAGGGCGCCCGGTGGAGACGGAGCCGTCGTGGTTCCAGCTGAATCCAGAGAAAACCCGGAGTGTTTGAAACGGAAATTTCGTGAAGTGTGTAACcctcaacaacacaacaacaaaaccatgGAGAGACACAAGTTCCATTCACGAAATCAAAAGCAAGGTGAGACTATTGAGTCCTACGTCAGTGACTTGAGGATCAAAGCTGAAAGTTGTCACTTTGGAGACCTGACGGAGGAACTGATTTGTGACAGAATAGTGTGTGGCATCAGGAATGACAACATAAGAAAGGCGTTGCTACGTGACAGTGAATTAACCCTAACGAAAGCCATTGCTATCTGCCGCATGTATGAAATGACTGAGGAGAATAATAAGGCTCGAGCCCAGCCCCAGACGGCCGAGGCGGGTACGGCTGCAGCCCGCAGCGTCCCATGTCACGCAGTCCCGTCTCATGCCGAGGCGTGTCCAACGGTACACATcagtgtctttaaaaaaaataacacacccCCGGTGACACGATGCACGGTGTGCTGTACCGACCATCATTGCCCCCTTTGCCCCACTTCCATATACAAGCCCCGGTGTAGGGCAAAGGTTTTGCAGCACATGGAGGTGCATGTAAAGAATGCCATTCAACATGAAGATTTCTTCATAACAAAATGCCACCAGGCCTGCAGGAGTGGAAGCAGTGGTCACTTCCACTGCCCTTTCTGCCTCAAGACCACAATAAAGAGGCAGGCCATACTGAGGCATTTGCAGATCTGTAGGCCACCTCTCCATGACGCCCAGCTGGACGCTgatgcagactgcagagagatGGGCGTCAATTCCCAGACAGAGGAGTGCAAAGCAGGATCTGTGAGCCTACCTCATATCAGCTCTGACAAACTGCCTGAACCGgTACATGATGGTGAAATACAAGGACAAAGAGACCCAGCAGAGAGACCCCAAGACCCAAGGATAAGGAGGAGGCAAAGAGGCCCAGGACAATCCCTCCTCAACAGTCGGTGAGGTTGGACGAGGAAGGCGGAGTGAGCTGCGATAGCTGGGACAAGTTCTGGGGACCCCCCCACCCTGGATTCTGATACGGCAGGATTTCCTGAGGAGGGATAACAAGGATCTGCACACACaagaatacaaataataaacatGTTACACTCTTC

Function

NR:

description
PREDICTED: uncharacterized protein LOC104953734, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811612.1 False 1618 mRNA 0.51 6 4657761 4661437
XM_039811614.1 False 1615 mRNA 0.51 6 4657761 4661437
XM_039811615.1 True 1621 mRNA 0.50 6 4657761 4662185

Neighbor

gene id symbol gene type direction distance location
LOC120565681 NA coding upstream 54608 4599472 ~ 4603153 (+)
LOC120565674 NA coding upstream 138168 4515052 ~ 4519593 (+)
LOC120565669 NA coding upstream 214237 4439340 ~ 4443524 (+)
prpf38a prpf38a,LOC107731643,LOC107684051 coding upstream 237980 4408643 ~ 4419781 (+)
LOC120564977 zgc:110434,LOC102204254,LOC103462478,LOC107386469,LOC101485372,LOC103381127,LOC103379246,LOC103395676 coding upstream 283007 4373826 ~ 4374754 (+)
niban1a LOC104958505 coding downstream 52470 4714655 ~ 4784151 (+)
mettl11b mettl11b coding downstream 190763 4852948 ~ 4873356 (+)
gorab gorab coding downstream 272576 4934761 ~ 4946307 (+)
prrx1b prrx1 coding downstream 304374 4966559 ~ 5000440 (+)
LOC120566192 NA coding downstream 362325 5024510 ~ 5201875 (+)
G93308 NA non-coding upstream 50968 4592376 ~ 4606793 (+)
G93286 NA non-coding upstream 151787 4500549 ~ 4505974 (+)
G93288 NA non-coding upstream 155709 4496053 ~ 4502052 (+)
G93293 NA non-coding upstream 190450 4461129 ~ 4467311 (+)
G93294 NA non-coding upstream 192327 4460271 ~ 4465434 (+)
G93323 NA non-coding downstream 30538 4692723 ~ 4759060 (+)
G93327 NA non-coding downstream 49089 4711274 ~ 4785944 (+)
G93332 NA non-coding downstream 83095 4745280 ~ 4750169 (+)
G93335 kifap3 non-coding downstream 136226 4798411 ~ 4805232 (+)
G93345 NA non-coding downstream 231133 4893318 ~ 4893706 (+)
LOC120565391 NA other upstream 344246 4284755 ~ 4313515 (+)
G93150 NA other upstream 439935 4174602 ~ 4217826 (+)
frem1b LOC100693369,LOC101486624,LOC102206675,LOC102294239 other upstream 833979 3714919 ~ 3823782 (+)
G92848 NA other upstream 1050936 3600978 ~ 3606825 (+)
LOC120565459 NA other upstream 1062373 3540034 ~ 3595388 (+)
trmt1l trmt1l other downstream 23039 4685224 ~ 4713233 (+)
G93613 NA other downstream 1373184 6035369 ~ 6051520 (+)
G93638 NA other downstream 1539900 6202085 ~ 6214017 (+)
rhpn1 rhpn1 other downstream 1692707 6354892 ~ 6381598 (+)
G93938 NA other downstream 2687625 7349810 ~ 7350587 (+)

Expression


Co-expression Network