LOC120565695


Basic Information

Item Value
gene id LOC120565695
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 21967192 ~ 21979558 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811631.1
GAGGGGAAAAAGCAGATAAAAGTTTTGGAGACAGaatcggagagagagagagagagagagagaaagaaggggaaAAGAGACTAAAGATAGAGTGGATTGAGTCTGTTAATGGAAAAGGTAGGAGAGGATTCAtggaaaaagaggaggaagCGCTCTGTGTCTCAGGagtcctcctgttcctcttctgcttcttcttctttctgtgAGGCTACTGGACATCATCCATCACCATGTTCTCTGACAGCAGGACTCCAGCGCCTGGGGAGCAGAAAGGCTTCAAGCCCCACGCCCCTCACTTCATCCCGTGGCTGCGCAATAGTCTTAAGCCCCACCACAGCAGTGACCTGGGGCTCAATGGACCGTACAAATCCAGCTCAGAGGCCTGCAACAACCTGACCCCGCTGGAGAGAGCCAAAGGGATCGGGTTCTTCTCTATCCAGGGAAGGGACCGGGCAAAGAAGGGGGAGGTTCGGTGTAATGGTGTAGGGATGGTGAGAATGCTGCCAGTGGTGCTGCGTGGGCACCATATCCTGCCTGGGAGTCTGGGGAAGCAGAGGGAGGACAGTCCTGCCAGGTGGAACCAGTCTCCAGAGCTGGACCCACCCACCAACACGCAGAGCAGTCCGGGGGACGGGCCGCATGGTCTGAGCAACAGCTCCACCTCTGCCCAGGACAACCACACCTTTGTTAGGAACCACGGCAGCCACCTGAGCCCCCTGAGCCCCCTTCAGTCACAGAATGACGGGACTAGCACCTCAGTCAGGAAATATGGGCCACTAGTGAGaccccctcctcttcctgtttctgGACTGCTCATTGAGGAGCCAAACTGTAAGGTGCCTGTTGTGGTGAACATTGAGGACAGGAGGGGGAAGGTGTGGGACTACGCCAGCAGTACAACCTACCGCAAGAGAGACCTCCATTCATCCAGCTGGGTGTGCTCGGACACTCAGGGACTAACAGAAAGGCAGCATGGCTTCCCCACCAGCTTCAGCtacaacaaacaacagagcaGGAACTCCCAGAGCCAGAGAGACCTGAGGGAACCACCTGTTGAGGGTTTCAACGGGCCCCTAAATGGAGTCATCTTCTCCACTGAGGTTCCTCAGAGAGGCCTGGGCTGCACCAAAACACTACGCCCCCCCAGGAAAGCTAGACCAAGCTCGGAGCTTATCGCGGCCCTGGGCCAGAATCAGACATGGGTCCAACACAGGTCGACCAATGAAGGGAAGCCACAGAGGAAGGAATCAGGCTGCAGCAGGAAGGTGGTTCGAAACCAGATTAAACGGGTGGTGGACAACCTGGAGCATGTTCTTACAGCGCTGAGGGACGTTCACCAGGAAATGAAAGAGGTGGTGCAGCAGATTGACCATCTAACCTCATCCATTGATCTGAATGTGGAGGAGCAGCAGGGGAATGAAAGAGGTGACAGCGCCAACCCTCCCAGCGACAGCAGCTCCAGTTCAGGTTCCAGCTCCAGTGAAGTGACATTAGGCAGCACCCATCAGTGGCCCTCAGAGCCTGGAGACCAGCCAGGAACCACAGACTCATTTGGCACCCTCAGGAGAGATCATCACAAGTGTCACTTTCCACCAAATATGCTGCTATGCCCGGTAACCTCTGGGTCTTCATCAGAGAGTCAAACTCTTCGGTTCACCTGCAGTCTGCTGTCTTCTCACAGACAAGGTGGGCCGCTCCAGTACAACAATAGTGTCTCTTTATCCAATCCCCCTCAAAACCTCACCTCCCATGATCTTACTTTGTCTCCCCAAAGAACCCTCCCTGTTCGGCCTCCCACTCCTGGTCTCTCCCCTCTAACAGTAAACCTCCATCACCCCAACAGCCCTGGTTCTCAGCCTCACTCCCCTGGTCCTTCCTCCTCCATCAGGGTCAGCCCTGTGTCCTCTCTGTCTGCAAAGTCTCAGCCACCCCCCACTCTTAGCCCTTCTGTCATCATAGAGAACAAGGTTGGGTCTTATCAGACCCCCCAAAGTGACCACCCATCTGCCagtttgctctctccatcatcGACCCAGCCTCCGTCTGCCAGCTGCCCACCCACCAACTCAGAAACTCAAACTGTGTCCAACACTGACAGAGAGAGGCGATCATCCTCGGCAGGACCCGTTCACagaccttcacaggtgtgctctGCCCCTGCAGCCACAGCTAAGCCACCAACAGCACCAGGCTGCAGGGGTCGCAAGCCTCCTCCGTACCCCCACCACAGACCCTCCGAACACACAAAGAAGGTGAAGGAACCCCGCAAAGCTCCTCCATACCCTGAGAAAAGAAGGCTTCTCTCGACCACAGTGTGAGACAatgcagcaggaggaggaggctgatCGAACAGAGCCACATTCACAGCACCAGCCGCAAGAGTGATTTAAGGCTCGCTAAGATGAGCTGAGACCAAGTTTCCAAGGTGACAGGATGCAAACGCAACTTGGGCATCCGGATGTGGTTACTTCCTGTTGTGACCCCAGAGGGAGGACGGTGACAAAGGGACACACTAACGTCCCCAGCTGAGCGTTTCCTCAACTCCAGAGGATCATCTCTAGACAGATGAGAGGATCCACACCCAGACCAAACAAGGCACGAATCTCAGGCACGGagccagagcaggaggaggaaacaCGTGCTCTCACTAATGACAGAGTGTCAGGACTGCCCTTGCTGGGGGAAGGAGGCGTGTCAAGGTGTGCTTCACTTCAGCGACGGCCACATCAGACACGGCAGACCTCCGCTAAGTGACTGAGCTCAGGAAGAGTCCAGAGACATTAACCTTCCATGAAACATTATGTGCAAAGACACGGCGGGTTTGACTTCCAGGagaaataaagcttttctgttACTTT

Function

GO: NA

KEGG:

id description
ko04514 Cell adhesion molecules

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811631.1 True 2858 mRNA 0.55 4 21967192 21979558

Neighbor

gene id symbol gene type direction distance location
tnfaip8l1 tnfaip8l1,LOC104918070,LOC103363933 coding upstream 4644 21946176 ~ 21962548 (+)
ncln ncln,LOC102776228 coding upstream 57994 21895470 ~ 21909198 (+)
s1pr4 s1pr4,LOC102777112,LOC100705658,LOC107100766 coding upstream 113780 21851042 ~ 21853412 (+)
enc3 LOC103373679,LOC103393865,LOC104920233,LOC107100952,LOC100702697,LOC102237431 coding upstream 375042 21577394 ~ 21592150 (+)
tmprss9 tmprss9 coding upstream 395393 21559203 ~ 21571799 (+)
LOC120565765 NA coding downstream 18361 21997919 ~ 22000097 (+)
LOC120565766 LOC107080871,LOC107654361 coding downstream 20639 22000197 ~ 22002659 (+)
zfr2 zfr2 coding downstream 73799 22053357 ~ 22079019 (+)
matk matk,LOC102798474 coding downstream 99634 22079192 ~ 22090850 (+)
rx1 LOC101073544,LOC104924617,LOC100705124,LOC102200154,LOC101467495,LOC102301254 coding downstream 124411 22103969 ~ 22112923 (+)
G97170 cope non-coding upstream 22631 21941105 ~ 21944561 (+)
G97096 NA non-coding upstream 222511 21743413 ~ 21744681 (+)
G97064 NA non-coding upstream 290843 21658550 ~ 21676349 (+)
G97009 NA non-coding upstream 510392 21368118 ~ 21456800 (+)
G97181 NA non-coding downstream 17855 21997413 ~ 21997743 (+)
LOC120565815 NA non-coding downstream 26217 22005775 ~ 22007353 (+)
G97190 NA non-coding downstream 54239 22033797 ~ 22035674 (+)
G97263 NA non-coding downstream 111831 22091389 ~ 22093374 (+)
G97295 NA non-coding downstream 176553 22156111 ~ 22157958 (+)
G97093 NA other upstream 185192 21690897 ~ 21782000 (+)
lsm7 lsm7,LOC102793261 other upstream 409461 21554894 ~ 21557731 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other upstream 525634 21411336 ~ 21441558 (+)
prkacba prkacb other upstream 1402368 20548999 ~ 20564824 (+)
G96513 NA other upstream 2435515 19530767 ~ 19531677 (+)
G97321 NA other downstream 304088 22283646 ~ 22287272 (+)
LOC120565764 LOC103367403 other downstream 505953 22485511 ~ 22491235 (+)
soat1 soat1,LOC102796196 other downstream 513399 22492957 ~ 22501015 (+)
LOC120566218 NA other downstream 592196 22571754 ~ 22576548 (+)
LOC120566227 NA other downstream 592911 22572469 ~ 22572551 (+)

Expression


Co-expression Network