bcl6aa (bcl6)


Basic Information

Item Value
gene id bcl6aa
gene name bcl6
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 41086373 ~ 41105748 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811640.1
GGCACTGCTGTAGTCGATGGTTTGTGCTCCTATGGTTTAATGAGATTTTAGATTCTCCGTTCAAATGAATTATAGATAGGAAAACTGGGATTATTTTACAGGCTGTTtaatctcttcctcttttttttgccCCACGGTTTCAGCATTCGTGGAAACGTGGAGCGAATGAGTGCTACAATCAATGAACGCTAGAGTGCAGGCGGCCTATCAGCTCAGAGAGCAAGAGATGCCCTGTGGACCGGTTCACTAACATGAAGCGTGCTCAGTCGACTTGACTCACTTCAGCCCCGCTGCCGCGCCCGCCTTTCCAAAAGCGTTCCCATCCTGCTGAACACTGACAGACATGAGGCTTCACCAGAGCTGCTCCGCCACCGCCTGACTCAGACTCAGTGCCCTCTTGCACTGAAGACAGCTTCATCCCTCCAGCTTAGGGAGGGGGCGGTGGGGGGGACCAGTCAGACTCTGCATCCTGGAACATATTACTTGCCAGAAAAATACAACTCTGGTGAACACAGTTTGGGTGGGTTGTGTTTTTGCTGTGCTGGACCTTACCATAGTCAGGTAGAAAAGTTGATTGATCTCAGTGAAAAGACTTTTTTTGGAACTGCAGAAGAGGCCCCCCTTCGCTTGCTGAACCTCGGCTCACAGCTTTGAATTCAAGGCGCAGGCACTTCCTCCTTGATTTCCACTACAGATCCCATCATGCCTCACTCCTTCCAGCAGAAAAAAGCTCAGCAGATGCTCCTGCTGTGCCAAGGGGTGAACGGGATGAGAAAAGACGGCGAATCCGTGGTTTGGAATCACCACAAGCAAAGTTTCCACGAACTTGACAAAATGGCTTGCGCAGCAGACAGCTGCATACAATTCACACGCCATGCAAGTGATGTCCTGCTCAACCTGAATCGGCTGCGTAGCAGAGACATTCTCACAGATGTCACTATCTTGGTTAACAGACAGCAGTTTCGTGCACACAAGACCGTTCTCATGGCTTGCAGTGGGCTGTTTTACACCATCTTTACTGACTCCCACAAGTGCAACCTTAATGCGATCAGTCTGGATCCAAAGGTGGACCCAGAGGGCTTTGCCATCCTGCTGGAGTTCATGTACACCTCCCGTCTCACACTAAAGGAGAGCCTGATTATGGCGATCATGAACACCGCCATCTACCTGCAGATGGACCATGTTGTGGACACCTGCCACAGATTCATCAAGTCCAGTGATCCGGCTGCCAAGCTGCCCAGAGATGAGTTTTTGATCAGTCCCTTGGTTCTACCTCAGGATGTCCATGCTTACCGGCCCCACGATGTGGTCGACAGTTTGCACAGCCGCGTGGCTCCGTTCAGGGATGGGAGGCCCTACGGCTCAAACATTTTCAACGGGGTCAGCACCCCCAGCAACTACCCATTCTACGGGCAGTTTCCCATGCCAGGATTCCCTTTCCCTCTCTGCAAGCTGACTGATGCCAAAAACACTTTTGCTGACCTCTCTAAGAGTGGGATCCACCACAAGCATTGTTCTCCGCATGACAGCGCCAACCTCATCAGGGCAGAATACAGCAGGGCGGTTGGCACTAGCTCCTCCAGCATTATTCACTCCACCACCTACGCTTCCAGGGAGGTAGCAAGAGACGACGAGATGCGGAAGGAAAGCCACGAGGGGGTCAGCCAGTCTATCGCTCTCGGCACAAGAAAGCGTGCGTTTCCTGTGCTGACCCTGGAGCACCAGAGAGACTCTGGAAAAGATCACGCTCCTCAGGCAGAGGAAGACCTGATCCATCAGCACTACCCCCTGGGGATCTCCTCCGCTGGACGCAAGAGCCTCATGAGCAGCCCACAGAGCCCCCTCAAATCAGACTGCCAGCCCAACTCCCCAACAGAGTCCAGCAGTAGCAAGAACGCCGGCCTGTCCCAAGCTGCCGGAGTACAAGCTCCGCAAGGTACACAGGACCCCAAATCTCGCAACTGGAAAAAGTACAAGTTCATCGTGCTGAATCAGAGTGCTAAGGAAGACGAGGGGGGGCTGCGGGATCCTGGGCTTCGTTCCCCTCAGCGCCTCGGCCTGCCGCCCTACCTCCACCCCAGCGACTCAGAGAACCTCGACCCACAAACCACAAGCAAGAGCAGTGATCCCAGCGAGGACCTGCCCGTGCCCCAGGCTAGTCGTCTcaacaacatcatcaacagTGCACTGGAGGGGTCACTGAGGAACGGAGACAGCCACCCTCCACACTACTTGAGCCGCCTGAACTGCTCGACCTGCGGCACGCCGTCCCCAAAGCACTCCGAAGTGTGTCCAAACACCTCCAGGACCCGTCTGGCAGAGGACATGGCCGAGCTGCACTCAGAATACTCCGACTCCAGTTGTGAAAACGGTACATTCTTCTGTAATGAATGCGACTCCAAGTTTGCCGAAGACGAAGCGCTGAAACAACACATGCTCCAAGTGCACAGCGACAAGCCATACAAGTGTGACCGCTGCCAGGCTGCTTTCCGCTACAAGGGCAACCTTGCAAGCCACAAGACTGTCCACACAGGAGAGAAGCCGTATCGCTGTAATATCTGTGGTGCTCAGTTTAACAGACCAGCTAACCTCAAGACTCACACTCGTATCCACTCAGGAGAGAAGCCATACAAATGTGAGACGTGTGGAGCTCGTTTTGTACAGGTTGCTCATCTCCGCGCCCATGTGTTGATCCACACGGGTGAGAAGCCATATCCCTGTGAGATCTGTGGCACGCGCTTCCGTCACCTGCAGACGCTGAAGAGCCACCTGCGTATACACACAGGAGAAAAGCCCTACCATTGTGAGAAATGCAACTTGCACTTCCGCCACAAGAGTCAGCTACGGCTGCATCTTCGACAGAAGCACGGCGCCATCACCAACACAAAGATCCAGTACCGCATGTCGACGGCAGACGGGCCCACTGACTTGACAAAGGCATGCTGAGCTGGGGGAAGGGAACAGTTTTAATGGAGGCAATCTTGACCTTGGCATTTAAAGACCCCAACTTGTACAATCATCCAAAATTGTAGTGCCACACTGTGTTCATTAGACAAATAAATTGGCTGTGTACGCCATTCTAAACGGGTTTCCACTACATGTGAACGTAGAGCCACTTATGGCATCTTAGTCACTTTATTGTTTCTATATAgatatggatatatatatatatatatgtatatgtcgGGAGTGTTTCTAAGCTTTGAAGGTACATATATATAAAGCTTTATTTTGTTGAGAAGGATGGAATGTAAACTAATCTGTTTTTTgaaaatacagtattttatatcAGAGAACTTACTTTTCTGAAAGTATTGAAAATTTTGATTGACGGGTGGTACATATATTTTAAGATTCTGAGATTTGCGGCTGTATAGGGTTGTCTATACATTTTTATGTAGATGTACGTACATGTTGCACCATATCAAGTTGCCATATTCATgtgacgaaaaaaaaaaaaaaaagtcctaatgTAATTGGATTTAGTAAAAAACATATCAGATGACTGCTGCTGTCTGATGAGGTTATGCATGAGGTACTCTATTACCGTTGCCAGTTGTCAGCGCACATGAAGTGGACAACTGCATAAATATTGTGAGATATTGTGTAATTATATCTGTGGGATTGCTCTCTGCTGGCAGAGCCAATCTAAGTGTTGAAAATGCATTTCAAGGTACTGCTTTGTTCTGACCAAGAAAATATTTTGCTTTAAGTGTATTTGTATAGAtgtgacttttgtttttgtttattggtTTTCCATAAGTGAAGTTTACAGTTTTGTCCTTGTTCTAGATCCTACAGTAAAGTTGTGCAAGTGTCGATATTTTTGGTTTGTACATACACTGTGTATTCAATGTGCCTTTCTCTCTATGGTGTCTGAATTCCTCGTTATTCAGCCCAGCTCTATTAAGGTACAACTCAAGGACATCACTTGTCCTAtaccccgtgtgtgtgtgtgtgtgtgtgattgtgtgtgtgtgtatatatatttttaaatgcttttcaCCAACCTTAAAACATGCAAATTCATCATTGTACATCTTCAGGACTTGTTTTGGGATTGGGCTTTTTTAACTGCATTAAAATTATTGTACAATGGTATAGATGtatgaatgtaaaataaaggTATTGGATTTCTATGTATTAACAA
>XM_039811641.1
CGTCTGATTCTTAGAACTGGGGTTCTTAGAAGTGGTGATGCAAGAAGTTTCTAGGAAAGCGCTACCagAACTTGACAAAATGGCTTGCGCAGCAGACAGCTGCATACAATTCACACGCCATGCAAGTGATGTCCTGCTCAACCTGAATCGGCTGCGTAGCAGAGACATTCTCACAGATGTCACTATCTTGGTTAACAGACAGCAGTTTCGTGCACACAAGACCGTTCTCATGGCTTGCAGTGGGCTGTTTTACACCATCTTTACTGACTCCCACAAGTGCAACCTTAATGCGATCAGTCTGGATCCAAAGGTGGACCCAGAGGGCTTTGCCATCCTGCTGGAGTTCATGTACACCTCCCGTCTCACACTAAAGGAGAGCCTGATTATGGCGATCATGAACACCGCCATCTACCTGCAGATGGACCATGTTGTGGACACCTGCCACAGATTCATCAAGTCCAGTGATCCGGCTGCCAAGCTGCCCAGAGATGAGTTTTTGATCAGTCCCTTGGTTCTACCTCAGGATGTCCATGCTTACCGGCCCCACGATGTGGTCGACAGTTTGCACAGCCGCGTGGCTCCGTTCAGGGATGGGAGGCCCTACGGCTCAAACATTTTCAACGGGGTCAGCACCCCCAGCAACTACCCATTCTACGGGCAGTTTCCCATGCCAGGATTCCCTTTCCCTCTCTGCAAGCTGACTGATGCCAAAAACACTTTTGCTGACCTCTCTAAGAGTGGGATCCACCACAAGCATTGTTCTCCGCATGACAGCGCCAACCTCATCAGGGCAGAATACAGCAGGGCGGTTGGCACTAGCTCCTCCAGCATTATTCACTCCACCACCTACGCTTCCAGGGAGGTAGCAAGAGACGACGAGATGCGGAAGGAAAGCCACGAGGGGGTCAGCCAGTCTATCGCTCTCGGCACAAGAAAGCGTGCGTTTCCTGTGCTGACCCTGGAGCACCAGAGAGACTCTGGAAAAGATCACGCTCCTCAGGCAGAGGAAGACCTGATCCATCAGCACTACCCCCTGGGGATCTCCTCCGCTGGACGCAAGAGCCTCATGAGCAGCCCACAGAGCCCCCTCAAATCAGACTGCCAGCCCAACTCCCCAACAGAGTCCAGCAGTAGCAAGAACGCCGGCCTGTCCCAAGCTGCCGGAGTACAAGCTCCGCAAGGTACACAGGACCCCAAATCTCGCAACTGGAAAAAGTACAAGTTCATCGTGCTGAATCAGAGTGCTAAGGAAGACGAGGGGGGGCTGCGGGATCCTGGGCTTCGTTCCCCTCAGCGCCTCGGCCTGCCGCCCTACCTCCACCCCAGCGACTCAGAGAACCTCGACCCACAAACCACAAGCAAGAGCAGTGATCCCAGCGAGGACCTGCCCGTGCCCCAGGCTAGTCGTCTcaacaacatcatcaacagTGCACTGGAGGGGTCACTGAGGAACGGAGACAGCCACCCTCCACACTACTTGAGCCGCCTGAACTGCTCGACCTGCGGCACGCCGTCCCCAAAGCACTCCGAAGTGTGTCCAAACACCTCCAGGACCCGTCTGGCAGAGGACATGGCCGAGCTGCACTCAGAATACTCCGACTCCAGTTGTGAAAACGGTACATTCTTCTGTAATGAATGCGACTCCAAGTTTGCCGAAGACGAAGCGCTGAAACAACACATGCTCCAAGTGCACAGCGACAAGCCATACAAGTGTGACCGCTGCCAGGCTGCTTTCCGCTACAAGGGCAACCTTGCAAGCCACAAGACTGTCCACACAGGAGAGAAGCCGTATCGCTGTAATATCTGTGGTGCTCAGTTTAACAGACCAGCTAACCTCAAGACTCACACTCGTATCCACTCAGGAGAGAAGCCATACAAATGTGAGACGTGTGGAGCTCGTTTTGTACAGGTTGCTCATCTCCGCGCCCATGTGTTGATCCACACGGGTGAGAAGCCATATCCCTGTGAGATCTGTGGCACGCGCTTCCGTCACCTGCAGACGCTGAAGAGCCACCTGCGTATACACACAGGAGAAAAGCCCTACCATTGTGAGAAATGCAACTTGCACTTCCGCCACAAGAGTCAGCTACGGCTGCATCTTCGACAGAAGCACGGCGCCATCACCAACACAAAGATCCAGTACCGCATGTCGACGGCAGACGGGCCCACTGACTTGACAAAGGCATGCTGAGCTGGGGGAAGGGAACAGTTTTAATGGAGGCAATCTTGACCTTGGCATTTAAAGACCCCAACTTGTACAATCATCCAAAATTGTAGTGCCACACTGTGTTCATTAGACAAATAAATTGGCTGTGTACGCCATTCTAAACGGGTTTCCACTACATGTGAACGTAGAGCCACTTATGGCATCTTAGTCACTTTATTGTTTCTATATAgatatggatatatatatatatatatgtatatgtcgGGAGTGTTTCTAAGCTTTGAAGGTACATATATATAAAGCTTTATTTTGTTGAGAAGGATGGAATGTAAACTAATCTGTTTTTTgaaaatacagtattttatatcAGAGAACTTACTTTTCTGAAAGTATTGAAAATTTTGATTGACGGGTGGTACATATATTTTAAGATTCTGAGATTTGCGGCTGTATAGGGTTGTCTATACATTTTTATGTAGATGTACGTACATGTTGCACCATATCAAGTTGCCATATTCATgtgacgaaaaaaaaaaaaaaaagtcctaatgTAATTGGATTTAGTAAAAAACATATCAGATGACTGCTGCTGTCTGATGAGGTTATGCATGAGGTACTCTATTACCGTTGCCAGTTGTCAGCGCACATGAAGTGGACAACTGCATAAATATTGTGAGATATTGTGTAATTATATCTGTGGGATTGCTCTCTGCTGGCAGAGCCAATCTAAGTGTTGAAAATGCATTTCAAGGTACTGCTTTGTTCTGACCAAGAAAATATTTTGCTTTAAGTGTATTTGTATAGAtgtgacttttgtttttgtttattggtTTTCCATAAGTGAAGTTTACAGTTTTGTCCTTGTTCTAGATCCTACAGTAAAGTTGTGCAAGTGTCGATATTTTTGGTTTGTACATACACTGTGTATTCAATGTGCCTTTCTCTCTATGGTGTCTGAATTCCTCGTTATTCAGCCCAGCTCTATTAAGGTACAACTCAAGGACATCACTTGTCCTAtaccccgtgtgtgtgtgtgtgtgtgtgattgtgtgtgtgtgtatatatatttttaaatgcttttcaCCAACCTTAAAACATGCAAATTCATCATTGTACATCTTCAGGACTTGTTTTGGGATTGGGCTTTTTTAACTGCATTAAAATTATTGTACAATGGTATAGATGtatgaatgtaaaataaaggTATTGGATTTCTATGTATTAACAA

Function

symbol description
bcl6 Enables several functions, including DNA-binding transcription factor activity; chromatin binding activity; and identical protein binding activity. Involved in several processes, including negative regulation of cell growth; negative regulation of transcription, DNA-templated; and positive regulation of regulatory T cell differentiation. Acts upstream of or within negative regulation of transcription by RNA polymerase II. Located in Golgi apparatus; nucleolus; and nucleoplasm. Colocalizes with replication fork. Implicated in B-cell lymphoma and diffuse large B-cell lymphoma. Biomarker of diffuse large B-cell lymphoma.

NR:

description
unnamed protein product

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K15618 BCL6; B-cell lymphoma 6 protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811640.1 True 4150 mRNA 0.48 10 41086373 41105748
XM_039811641.1 False 3395 mRNA 0.48 9 41098958 41105748

Neighbor

gene id symbol gene type direction distance location
zbtb11 zbtb11 coding upstream 338996 40737734 ~ 40747377 (+)
dpt dpt coding upstream 363538 40715933 ~ 40722835 (+)
nme7 nme7 coding upstream 403131 40657846 ~ 40683242 (+)
LOC120564870 bivm coding upstream 435543 40643959 ~ 40650830 (+)
tmem131 NA coding upstream 448689 40603534 ~ 40637684 (+)
trnap-cgg_3 NA coding downstream 119343 41225091 ~ 41225162 (+)
trnap-ugg_3 NA coding downstream 119886 41225634 ~ 41225705 (+)
im:7152348 NA coding downstream 120862 41226610 ~ 41227656 (+)
zgc:103559 LOC104941656,LOC108241179 coding downstream 421653 41527401 ~ 41533655 (+)
G101990 NA non-coding upstream 146056 40860037 ~ 40940317 (+)
G101832 NA non-coding upstream 577006 40508891 ~ 40509367 (+)
G101831 NA non-coding upstream 578614 40507500 ~ 40507759 (+)
G101823 NA non-coding upstream 599352 40486791 ~ 40487021 (+)
G101796 NA non-coding upstream 825764 40260363 ~ 40260609 (+)
G102006 NA non-coding downstream 5825 41111573 ~ 41114235 (+)
G102021 NA non-coding downstream 49174 41154922 ~ 41156467 (+)
G102022 LOC106527457,LOC108240210,LOC103354232,LOC107088662 non-coding downstream 50804 41156552 ~ 41157040 (+)
G102074 NA non-coding downstream 103912 41209660 ~ 41268656 (+)
G102081 NA non-coding downstream 125919 41231667 ~ 41234402 (+)
atp10a atp10a other upstream 526478 40515093 ~ 40559895 (+)
LOC120565298 cdkl5,LOC103356958 other upstream 1346096 39693912 ~ 39740277 (+)
reps2 reps2,LOC102792668 other upstream 1493611 39561061 ~ 39592762 (+)
LOC120565708 LOC103369944,LOC100698021,LOC101482931,LOC102791229,LOC102291415,LOC102212992 other upstream 1621923 39454120 ~ 39464450 (+)
prdm5 prdm5 other upstream 1724640 39323584 ~ 39361733 (+)
G102165 NA other downstream 346926 41452674 ~ 41453306 (+)

Expression


Co-expression Network