LOC120565703


Basic Information

Item Value
gene id LOC120565703
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 10543708 ~ 10553852 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811647.1
ATGGGGGCTATGAAGTGGCTGGTGATTTTTGTCACGCTGGGCATGTGCTCACAGGCATCAGCTATCCAAGTATCCGTGTTCTCAGTAACATCCAAGAGCGCGATTCTCAGATGGACCAGGTACTCTGGAGCCAGCTCATACAAGATTACTGTCGCCCCCCAAAGCTCACAAAACAACCCCATTGCTTTTGCCACGTTTGGTCCAAACACAGTGCTGGGCTCTGTCAACTCTCTGACCCCGAACATCCTGTATACATTCACAGTTGAAGCCCTGGATGATTCCCAATTAAGACTGAGCTCTGCAGTTGTGGATTCATTCACAGCCCCTGAGATTATGGATCCCATCCAGACCTTGAAGCCAAAGGATAGCACTACCTTGATGGTGGGGTTCAGCTTGAATACCGGGGCGACTCATTACATCATACGAATCCAGAATGATGATGGCTTTTTCAGAGAAGACCAAGTGTCCTCCTCCCCCGCTGAGATTGAGTCCCTCTCGCCATACACTGAGTACGAGCTCAGCATCATGTCTGCGAACAGGGGAGGCCGGAGCCAGCCGTCTCTTCCTGTGACTGCAAAGACAGTTTTGCCTCCTCCTCAGCTCTCCACCTCCTCTCCCAGCAATGACAGCATCATTGTATCCTGGGCCCCTGTTGCTCACGCTGTCCAGTACAGCCTGTCTATATACGACTTTGGCTCTAACACCAACATGAAGTACAACACCTCCGACACCAATTTGACCATCTCAGGCCTGGCTGCTGGCTCACTCTATGCCATCAAGGGTTTCGCCTGGGACCTCGAGGGCCGAGAGGGAGAGGGCAGTCTGGTCATCAACCAAACAACAAGACCACCTACGCCATCTTTTGTCAATGTCTCTATTGTGACGATTAACGGTGTGGCCGGACTCTCTGTATCCTGGAAACTTGATCAGGATGTCTATGGATCAGTCCAGTACCACGTACTGAGTGACCAGAACCGCACATGTAACTCCACATCCAGCTCCTGCATACTGTCGGCCGTGGGCTGTGGAGAGGTACACACTATCCAGGTCATCGCCTTGAACACAACTGGACCCAGCTTCCCATCCAGCCCTGTGGTGTTCATCACCTTCCCCTGCCCACCAGAGTCTTTGGCTCTTGTGGAGTCAACAGAAGGAAACTGCACGCTAACGTGGGGCACGGTGCCTCATGCCGACAGCTACGTGGCCTTCTTCAAGAGAGGTGACGGCACCGAGGAGACCTGCAACACCACCAGCAACAACTGCAAATACCACTGCCTGTGTGGCTACACATACCTGCTGTCTGTGTATGCGTACAATGAGGCTGGCAGCAGTCCTCAAGGACAGATTCTCAACTATACCACCTTGCCCTGTTGTCCAGAGGGTGTATCGGTCTCTGTGGTGAGCACTGACACTCTGGAGATTGTGTGGATGGCCTCGCGGGGGGCAGAGCTGTACCAGACTCGGGCTGCAGACAGTTCAGAGGTCATCCTGTGTAACGACACAGCACCCGTGTGCGCTCTCTCTGACCTCAGCTGCGACAGTCCCTACAGCGTGGTGGTGACACCCTGCAATGAAATCAGCGGATGCAACCATGCATGCAAAGCTCACACCAAAGACACAGCTGCTTGCATGCCGATGAATCTGATGCTGAATCCGAAGAACTCCTCCTGCGTCAGTGTCAGCTGGACAGCAAACAACAGGGCTGCTAATTACACTGTGAGCGCGTCGGGAGATGACGGCCAACACACCTGCACCACCAGCGGAAACAGCTGTGACATCACAGACCTTCCATGTGGCTCCACTTACGAAGTCAGCGTCATAGCAACCAGCGCAGCCGGCCAGAGTTTACCCAGCTACTCTGACTATCTGGAAACAGAACCCTGTTGCCCGATGAATCTAACAGTGGAACAGGTGACACAGGCAGTGAGCAACATCTCGTGGTCTCACGCCAAGGGGGCGCATTCATTCATCACTTCCCTGACATCAACGCGTGGCCACGCCCGCTGCCACACCCAGGACTCCCACTGCCTCGTGGGATGCATCACCTGTGGGACCAACTACACTGTCACCATGGAGGCGTTCAGCAAAAGCGGGAGCATGTCCAACTGCACCTATGAGGGCTTCTCGTCCAGTGCCTGCTGTCCGTCAGGTGTCAGGCTCTACAGTATAGCTGGGAACTCTCTGCGAGTGTACTGGCGCAGCGCTGGCAGCAGCCACAGCTACGTCACAGAGATGGTGGGCAGCAGCAACAACTACACCTGCACTGCCTCTCCCGGAGCAAGcagctgtgattttggcaacaTCCAGTGTGGGGACGTCTATCATGTAATGGTGGCTCCGCTTACACCAGAGGGCAGCAAAGTCCTGTTCTGCCCCCAGAGACTGTACTCTGTCACTTGCTCAGGGAGCAACGTTGGCACAGTGATTTACAGAGGGAAGAGAAGTGTGAATTAACATACGATGCAACAAACTCCTCCatcttcttcatcttcctcttcctcctgctctACTGGAATAAAGCCATATTCATAGCTAAACAGAAAAACAGCTGTTAACCTGTGGCATACATGGGTGATAACATGAtggataataataaatacatgtttggGATATGATTAGGTGTTTTAAACTTGCCTTTTAAATAATGTTCATGTATATCACGGCCAAACTAAACCATCACTGTGCCCTCAACAATTAAGATCATCACTTACCTGACAAAAACAAGCCAACCAAAAGagtgcattttgtgtgtgctgcTTAAAATATATATCATGAGACAAAAGCATGGATTTTGTAAATGTAAGAGTTTCTCATGATAAAACTTACAAACAACTATAACTAAAttcactacatatatatatatatatatatatatgagtatcAGTAACAGTGCCCCTCCCaatatttttaaacaatttCACCTCTTTTGTTTTAAGACTTATGAATTACAAAATGTaccaaatttaaataaaaaagaattgtAGGTGCAGCCCCAAGTACAAAGCCTCCTGATGATAAGTGGCAGATACTGATCTATGTCACCTCATCCTGCTTCACACTGTAGCGTATAATTTCTGCAGTGTGCTGTTGCTTGTTCTCAGGATGTATTTCTGTGTTGAATATGTGTCACTGTGGTTGTGAAAACCCGATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811647.1 True 3152 mRNA 0.50 13 10543708 10553852

Neighbor

gene id symbol gene type direction distance location
zmat3 zmat3 coding upstream 40642 10493529 ~ 10503066 (+)
kng1 NA coding upstream 92726 10440558 ~ 10450982 (+)
sox2 sox2 coding upstream 428386 10112982 ~ 10115322 (+)
fxr1 fxr1,LOC106531534 coding upstream 563966 9967354 ~ 9979742 (+)
LOC120565621 NA coding upstream 678253 9851125 ~ 9865455 (+)
LOC120565623 NA coding downstream 38985 10592837 ~ 10609226 (+)
henmt1 NA coding downstream 63523 10617375 ~ 10627039 (+)
slc25a24 slc25a24,LOC104951356,LOC104935995 coding downstream 99787 10653639 ~ 10668886 (+)
LOC120565966 LOC101466472,LOC102777579,LOC108238401,LOC101066382,LOC106527066 coding downstream 127687 10681539 ~ 10691086 (+)
tm4sf18 LOC100702951,LOC102305373,LOC101466751,LOC102228636,LOC103155263,LOC104936000,LOC103374892,LOC105936905 coding downstream 142171 10696023 ~ 10714882 (+)
G94515 NA non-coding upstream 12327 10530696 ~ 10531381 (+)
G94450 NA non-coding upstream 34170 10507652 ~ 10509538 (+)
G94426 NA non-coding upstream 138475 10339236 ~ 10405233 (+)
G94427 NA non-coding upstream 184920 10346197 ~ 10358788 (+)
LOC120565491 NA non-coding upstream 246450 10204140 ~ 10297258 (+)
G94587 NA non-coding downstream 157351 10711203 ~ 10711496 (+)
G94604 NA non-coding downstream 394651 10948503 ~ 10948822 (+)
G94609 NA non-coding downstream 409696 10963548 ~ 10977065 (+)
G94613 NA non-coding downstream 442625 10996477 ~ 10997201 (+)
G94674 NA non-coding downstream 547476 11101328 ~ 11101569 (+)
atp11b atp11b other upstream 128882 10363462 ~ 10414826 (+)
LOC120565490 NA other upstream 383827 9985719 ~ 10159881 (+)
ttc14 ttc14 other upstream 595471 9933613 ~ 9948237 (+)
G94376 NA other upstream 640519 9902285 ~ 9903189 (+)
LOC120565620 NA other upstream 697433 9844271 ~ 9846275 (+)
G94598 NA other downstream 363073 10916925 ~ 10941244 (+)
si:ch211-162e15.3 LOC103376230,LOC100712485,LOC108238459,LOC102795316,LOC102207055 other downstream 393080 10946932 ~ 10948316 (+)
LOC120565923 LOC103370579,LOC100695501,LOC102794561,LOC101470646,LOC102226407,LOC102291616 other downstream 805838 11359690 ~ 11458146 (+)
znhit6 znhit6,LOC102790327 other downstream 1235283 11789135 ~ 11821882 (+)
lrp8 LOC103355569 other downstream 1607786 12161638 ~ 12443080 (+)

Expression


Co-expression Network