zgc:77486 (LOC104918432,LOC103358789,LOC101467589,LOC102787348,LOC100705167)


Basic Information

Item Value
gene id zgc:77486
gene name LOC104918432,LOC103358789,LOC101467589,LOC102787348,LOC100705167
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 25457253 ~ 25467003 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811666.1
GGCTGAATCGATGCTGAGGATGACGTCATGGTCGTTGTTTCGAATGTCGGGAGGTAGCGCTGGGTAGGAGGCCGCGAGCTCTGCTGGGGACACAACTTATACAAATCTGAAGCCCAAGGTCGTCGACATCCCCCGGTACCTTGTATTTCAGGAATATCCTCCCCCATCCCCCCTTGCCCCCTCTGTCAGAGCATGGCTCAGGAGACCAATCAGACGCAGGTGCCAATGCTTTGCACTATGGGATGCGGTTTCTATGGTAACCCCCGCACCAACGGCATGTGCTCGGTCTGCTACAAGGAACACCTGCAGAGACAACAGGGAGGGGGGCGATCCAGCCCGCCAGGAGAGAAAGCTGCTACATCACCGGCAGGATCGGCGGGCTCAGCTGGTGTGACTGTGGAGAGTACAACCTCAGAGCCCAGTACAGAGGTGGCAGGAACCCCACCTGAGGAACAAACGAGCAGTCCCAGCTCTCCCAGCCCAGTAACTCAACAGATGACAGCTATGAGCATCTCCCAGGATTCGGGAGCTGTGGACTCTGATCGAGCGGAGGCtgaggagggagaagaggagggTACTAGCAGCAGCTCAGAGCCAGTAGGGGAAGCAGCACAAGCTTTGTCTGATAATGACCAAACTCCagataaaaacaagaaaaagaaccGCTGCTTTTCTTGCCGGAAGAAAGTAGGCCTCACTGGTTTTGACTGTCGCTGCGGGAACCTCTTCTGTGCCATTCACCGTTACTCTGACAAACACGACTGTCCCTATGATTACCGGAGTGCAGCTGCTGCCCGCATACGCAAGGAGAACCCCATCGTGGTGGCTGAGAAAATTCAGAAGTTATGA
>XM_039811667.1
ATGGCTCAGGAGACCAATCAGACGCAGGTGCCAATGCTTTGCACTATGGGATGCGGTTTCTATGGTAACCCCCGCACCAACGGCATGTGCTCGGTCTGCTACAAGGAACACCTGCAGAGACAACAGGGAGGGGGGCGATCCAGCCCGCCAGGAGAGAAAGCTGCTACATCACCGGCAGGATCGGCGGGCTCAGCTGGTGTGACTGTGGAGAGTACAACCTCAGAGCCCAGTACAGAGGTGGCAGGAACCCCACCTGAGGAACAAACGAGCAGTCCCAGCTCTCCCAGCCCAGTAACTCAACAGATGACAGCTATGAGCATCTCCCAGGATTCGGGAGCTGTGGACTCTGATCGAGCGGAGGCtgaggagggagaagaggagggTACTAGCAGCAGCTCAGAGCCAGTAGGGGAAGCAGCACAAGCTTTGTCTGATAATGACCAAACTCCagataaaaacaagaaaaagaaccGCTGCTTTTCTTGCCGGAAGAAAGTAGGCCTCACTGGTTTTGACTGTCGCTGCGGGAACCTCTTCTGTGCCATTCACCGTTACTCTGACAAACACGACTGTCCCTATGATTACCGGAGTGCAGCTGCTGCCCGCATACGCAAGGAGAACCCCATCGTGGTGGCTGAGAAAATTCAGAAGTTATGAGGACTgagtgcaaaaacaaaaacaagtctCTGACTTTGTGAATTTGAACAATGGCAACTTGGATGAAAACACCTGATATCATGGCTTCATTTGTTCATGGTAGACTAAGACGGGCGGGGTGGGGTGGTGAGGTTGCAGCCACTGTCCAGACGCTTCCCTTACTagcatctccctctctctccgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcacgcgcgcctgtgtgcgtttgtgtgtgtctgtctgtctgtctgtctttctcttgcTTGAGGGTCAGGGAGAGAGCCATAGGGGCCTGGTTGACATTAGTGTGGCTGTGGGAAGggaagacattttattttacccCTTTTTGTTTGGGGgagcgtgttttttttttttttttttttttaatacaatccCTGTAAGGCCGTTTGAAATGAGACAGGTAAGCTGTTGAGGAATGTGTCGCAGCCTGGTTAATGACACAGAGGTCAATTAAGAAGGTCtaacaagtttaaaaaaaaaaaaaaaaagaaaaaaaacctaacTGGGAGATTTCATGTATCAGCAAGACCTTTTTAAGGGCTTTtggaatataattttttttttttttttttccccgacTGAAAATGATGTCAACTTCTTGTCAAATTggcagattttttatttttttcccccttcccaCCTCCTCTTACCTTTTCTCTATTGGTCACCATATGTTGAACTCCCAAGTCTCAGCATTTTCCAGAAATGTTTCTCTTTGATATATTGACTTATCATACTGATATTGGGTGCATGAACAGTTATTGGACGGGAAAGGTAGGGGAGGGCAAGGGTAGGGGAAACTGAGAACCTTGACTTAACCGAGtgattgaattgtttttttctttttattttctttttttttctgttttaatgaGCGTATGACATCAGAAGATCTATATTAATATATTGTAGTTAGCTTGAATTGTGTGATTgcattctatttattttttatcgtTTGGTTGGTCTGTGCTGGAGGATTGGCAGCATGTGTCAGCAAATCATTAAGGTTTGCACTTAACCTTTTCAATTATATTTAGGTAATTCCATCTTGATTATATAACCATTGAATAAAAGATACACAAGCTCTGACATGATAGAGTAGGGTCCAGTTAAGCCGCAGTTACAGTTAAAATCGTGCAGCGAAATGTCCATAGTTTTGGATTTTGGAAACAAAGCACAACAAAGTGTGTCAACTGCAGAGCACAAAAATAATGTGCCACACCTACTCCGTTTTGTTCAGCATCTGGGTCATTTGCAGTTTATATTTGATCTGTATAGCAGGCTCGCTGAACAAATTGCCTGATTGATGAGACGTTCTGTGTTAGTAAGGCGCTGTGTTCTCCTTTTAATGCCCTTTTCTGTTCTATGGAGTCAGAGTGAAGCTCCCTGTTTCTCTAACCACCAGCAGACCACTGACACATGCTGAATGAAAACTGACCTGGGTCGCAGTGACACCTTCTGCTCTGCTAAAGTAAGGGTTGGCGCAATGCTACGGAGTTGCGTGCTGTGCTTTTTACAATGTGGTCAGATTCAGACGAGTCCTTGCTACGAAGATCGCCTCTAGCTAGCTTCTTCTAGGAAGATCAAGCTTACCTGCATGTGTGCAGTCAAACAAATGAGTTACTGTTTGGTAACCGACTGCATAGTTTGAAATGAAGCTGGAATGTTCCAAAAAAGCCACACAGCAGTAGCACAATGCATGGCTAGAACCCTAAGGTTCAAGTTAACAGgactctactttttttttttcttcttcttccaaatGTAAATACCATATGGCTCCTATTCATATAGTATAATCTTAATGTAGATTTTTGCCAAGTAATAAAGGTGGGGGACTAAGGCGAAGAATAGTACTATGTGTATAAAAGTGCTTTTCATAATTATCCCAAAAAATTACTGTGCCACAAATGGCactattttttcccccccatctTTTTATTTACAGGTTATTAACCACATCATCTGCCCACATAATGTCCAAAGTATGTTTAGTAGTTTGCTGTACCATGAGTATCTAAAGGCCATGTGGCTTCTATTCTACCATACTAGTCAGATTGTTAACAAGGCCCTTAAGCTTTACTTACATTGCGGAGTTACACAGTATCCTAGTCCATGTTTATATCCCGTTACTGAAGCCTTTTCATAGCTTAGCGAAAGTTAAAAAGGCCTCTTGTGAGGAGCAGGGGGGCATTTGAGGTTTCATCTTTTGATTATCAAAAGCTTTCCTTGTAAATGTTGCTTGATCTTGATCATATAATATTTATGAAAGAGCTGTAGAAAAGTTGCAAGGAATTTGTggggtgtgtgtttttaaaataagCCAATGCAGAATGTATTGGACATGAATGACTTTTTCCTTGCATACGCAGAATATCACGTTGGACCTGGTTGTGTTTAGTTCTGGCTCCTTTTATTGGAAAATTGGCCTTCATCGTAATTCCTGTTAAACTCCTAGTGTGGGTGATGGACGTGTAAATAGCTTTGTGACCAGGCGTGCCAACACCGAGAGTATTTACCCAGGATAAGTTGGGCATCTCAAGCCCCTGACTGTGATTTTAATTACCACTGGTGGAAACTTGAAATTCAGAAGGAGTTTAAATATTGTTGTATTCAGGTGGTTGGAGCAGCTCTGCAAGTTCGATGTTCCCTAAGGTGTATCTTATATATTCAGAGTATTCAAGCTTGCCTGCTGGGTTGACCGTTAACAAAATATTGTCACCTacaaaatgctttgtttttccTTTACAGATTGAAAGTCCTTTCAGAGTAAAAGTCCTTAACTGGGGATGATTGTTCAGGTGTGTAAACCGTGAGGATTTAACGGTCtacacacatttgttttctaTTGACTGCTCATATCAAACCCCCAACCCCCTATTTTCATAATAAACATGGGCAGTTTGAATGTAAACCACCATAATTCACATAATCAGCTGCAATGTCATTTATCAAACTACATGGCCCTGATATTGACTTTGTTTTTGGGCGAAAGCCCAATTTCCTTCCATGTGGTTTGGGACATTTGGATCACTTATTGTTTTGACTGTTTGTGATGAAGAACTTGGCACCAGCAATTAGGGCAACCAAACCGAAATAATCTAGATATTATCAGTAcatatactttattttttttcttccttctgtTGTGTTGCTTCTGTAGAGTTTTGATGTCTTCAATCCCATATTCAGCACAACCTTTCATAATCAATGTCTTCATCATGCGAGGGTTTTGATTGATAATGATGAACCTGTCAGTTGTGATGAGTCTGGTTTGAAATTCAGTTTTACTGCAGAAGTACAGACAAATGACGATGACTTGATTCATTCTGTCTTTTCGAGATGAGCTTGAGGGACAGCAAATGAAATCTACAATGTTGACAGAGCTGTTAGTTCTTGTTCCTTGGCACTCCAGTCCCCCAGAAACACCACcagatatctttttttttattttgtttttcgtTAAAGATTTAGGATTGTATGATGTGTAAGAGTAagtataaaacaataaattcacaaagtttattttaaatta

Function

NR:

description
AN1-type zinc finger protein 5-like

GO:

id name namespace
GO:0003677 DNA binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K24687 ZFAND5_6; AN1-type zinc finger protein 5/6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811666.1 False 849 mRNA 0.55 6 25457253 25463443
XM_039811667.1 True 4217 mRNA 0.41 5 25458582 25467003

Neighbor

gene id symbol gene type direction distance location
plin3 plin4 coding upstream 94 25444399 ~ 25457159 (+)
mpnd mpnd coding upstream 228972 25219482 ~ 25228281 (+)
LOC120565286 LOC103358799 coding upstream 278500 25096838 ~ 25178753 (+)
ssbp3b ssbp3,LOC100703237 coding upstream 373331 25069211 ~ 25083922 (+)
erich3 erich3,LOC107081397 coding upstream 428037 25009864 ~ 25029216 (+)
abhd17ab abhd17a,LOC102787648,LOC100697085,LOC102288803,LOC101468085 coding downstream 1396 25468399 ~ 25476235 (+)
npl npl coding downstream 134878 25601881 ~ 25613413 (+)
sec22bb LOC104918424,LOC104948961,LOC100705437,LOC106584381,LOC103354218,LOC106613829 coding downstream 186859 25653862 ~ 25663704 (+)
notch2 LOC104948964,LOC103354216 coding downstream 211533 25678536 ~ 25729476 (+)
rex1bd clg23h19orf60,LOC104918420,LOC103354213,LOC102791516,LOC102205217 coding downstream 281872 25748875 ~ 25755656 (+)
G98163 NA non-coding upstream 198767 25253473 ~ 25258486 (+)
G98123 NA non-coding upstream 224853 25229382 ~ 25232400 (+)
G98128 NA non-coding upstream 265415 25191064 ~ 25191838 (+)
G98033 LOC104965512 non-coding upstream 566877 24885420 ~ 24890376 (+)
G98021 NA non-coding upstream 581587 24837613 ~ 24875666 (+)
G98177 NA non-coding downstream 12345 25479348 ~ 25479604 (+)
G98186 NA non-coding downstream 44853 25511856 ~ 25512252 (+)
G98188 NA non-coding downstream 48047 25515050 ~ 25515742 (+)
LOC120565050 NA non-coding downstream 53869 25520872 ~ 25521287 (+)
G98196 NA non-coding downstream 91110 25558113 ~ 25608391 (+)
elovl1b LOC106963699,LOC101078639 other upstream 583337 24852287 ~ 24873916 (+)
G98012 dmbx1,LOC103373966,LOC108230579 other upstream 673372 24781918 ~ 24783881 (+)
LOC120565649 LOC103373964,LOC107081966 other upstream 692028 24749017 ~ 24765225 (+)
cks2 LOC104918474,LOC108230759,LOC102216377,LOC104949087,LOC105011584 other upstream 1249112 24204341 ~ 24208141 (+)
cdc34a cdc34,LOC103368917,LOC104923648,LOC103397164,LOC107393183,LOC103156874 other upstream 1806740 23631119 ~ 23650513 (+)
G98194 NA other downstream 65822 25532825 ~ 25547089 (+)
slc35a3a slc35a3,LOC101471768,LOC102790943,LOC100705874,LOC108230529,LOC103354215,LOC106515047 other downstream 263222 25730225 ~ 25738789 (+)
dot1l dot1l,LOC102793654 other downstream 524503 25991506 ~ 26019371 (+)
oaz1a oaz1,LOC104950707 other downstream 567748 26034751 ~ 26039866 (+)
zbtb7a zbtb7a other downstream 816049 26283052 ~ 26295382 (+)

Expression


Co-expression Network