LOC120565732


Basic Information

Item Value
gene id LOC120565732
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 786702 ~ 787874 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811714.1
TTCCCCTGAACGCACCGTCAAGGTACATTTCTCCTGAACGCACCGTCAAAGTACGTTTCCCCTAACTTCCCTTAAACGCACCATCTAGGTACACTTCCCATAAACGCACCGTCAACGTATGCTTCCCCTTAAACCTACCTGTCTGTTTAACTCACCTGTCCAtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgaggaGTTGATGTCTGtaaaggtgtgttcaggtgaggaGTTGGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgatgaGTTGATGTCTTTAAAGGTGTGCTCAGGTGAGGAGTTGGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgaggaGTTGGTGTCTGTAAAGGTGTGTACAGGTGAGGAGTTGGTGTCTGtaaaggtgtgttcaggtgaggaGTTGGTGTCTGtaaaggtgtgttcaggtgaggaGTTGGTATGCGtaaaggtgtgttcaggtgaggaGTTGGTATGTGtaaaggtgtgttcaggtgatgaGTTGTTGTCTGtaaaggtgtgttcaggtgatgaGTTGGTGTCTGtaaaggtgtgttcaggtgatgaGTTGTTGTCTGTAAAGGTGTGTTCGGGTGAGGAGTTGGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCCGtaaaggtgtgttcaggtgaggaGTTGGTGTCTGtaaaggtgtgttcaggtgaagaGGTAGTGTCCGTAAAGgtgtgttcaggttAGTGCAGGTCTGTACATCTCacataaaacagaaagaaagcgaTTCAGACAGCAGCTCTGATTTGTCGACAGCAGACATCCACAGTGTCTTCAGTCAACATTAAACAGCTTCGCTTCACTTGTGGTTACTCTATGTGCTGATCTGCTATTGGCAGATTTGGTTTAAAacgatctgattggctgctgactgtttctgtttcta
>XM_039811715.1
TTCCCCTGAACGCACCGTCAAGGTACATTTCTCCTGAACGCACCGTCAAAGTACGTTTCCCCTAACTTCCCTTAAACGCACCATCTAGGTACACTTCCCATAAACGCACCGTCAACGTATGCTTCCCCTTAAACCTACCTGTCTGTTTAACTCACCTGTCCAtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgaggaGTTGATGTCTGtaaaggtgtgttcaggtgaggaGTTGGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgatgaGTTGATGTCTTTAAAGGTGTGCTCAGGTGAGGAGTTGGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgaggaGTTGGTGTCTGTAAAGGTGTGTACAGGTGAGGAGTTGGTGTCTGtaaaggtgtgttcaggtgaggaGTTGGTGTCTGtaaaggtgtgttcaggtgaggaGTTGGTATGCGtaaaggtgtgttcaggtgaggaGTTGGTATGTGtaaaggtgtgttcaggtgatgaGTTGTTGTCTGtaaaggtgtgttcaggtgatgaGTTGGTGTCTGtaaaggtgtgttcaggtgatgaGTTGTTGTCTGTAAAGGTGTGTTCGGGTGAGGAGTTGGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCCGtaaaggtgtgttcaggttAGTGCAGGTCTGTACATCTCacataaaacagaaagaaagcgaTTCAGACAGCAGCTCTGATTTGTCGACAGCAGACATCCACAGTGTCTTCAGTCAACATTAAACAGCTTCGCTTCACTTGTGGTTACTCTATGTGCTGATCTGCTATTGGCAGATTTGGTTTAAAacgatctgattggctgctgactgtttctgtttcta
>XM_039811716.1
TTCCCCTGAACGCACCGTCAAGGTACATTTCTCCTGAACGCACCGTCAAAGTACGTTTCCCCTAACTTCCCTTAAACGCACCATCTAGGTACACTTCCCATAAACGCACCGTCAACGTATGCTTCCCCTTAAACCTACCTGTCTGTTTAACTCACCTGTCCAtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgaggaGTTGATGTCTGtaaaggtgtgttcaggtgaggaGTTGGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgatgaGTTGATGTCTTTAAAGGTGTGCTCAGGTGAGGAGTTGGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCTGtaaaggtgtgttcaggtgaggaGTTGGTGTCTGTAAAGGTGTGTACAGGTGAGGAGTTGGTGTCTGtaaaggtgtgttcaggtgaggaGTTGGTGTCTGtaaaggtgtgttcaggtgaggaGTTGGTATGCGtaaaggtgtgttcaggtgaggaGTTGGTATGTGtaaaggtgtgttcaggtgatgaGTTGTTGTCTGtaaaggtgtgttcaggtgatgaGTTGGTGTCTGtaaaggtgtgttcaggtgatgaGTTGTTGTCTGTAAAGGTGTGTTCGGGTGAGGAGTTGGTGTCTGtaaaggtgtgttcaggtgaggaGGTAGTGTCCGtaaaggtgtgttcaggttAGTGCAGGTCTGTACATCTCacataaaacagaaagaaagcgaTTCAGACAGCAGCTCTGATTTGTCGACAGCAGACATCCACAGTGTCTTCAGTCAACATTAAACAGCTTCGCTTCACTTGTGGTTACTCTATGTGCTGATCTGCTATTGGCAGATTTGGTTTAAAacgatctgattggctgctgactgtttctgtttcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811714.1 True 1107 mRNA 0.47 2 786702 787874
XM_039811715.1 False 1041 mRNA 0.46 2 786702 787874
XM_039811716.1 False 1041 mRNA 0.46 2 786702 787874

Neighbor

gene id symbol gene type direction distance location
LOC120565788 LOC100695038,LOC103366337,LOC107380922,LOC107082714,LOC105918713,LOC105028844,LOC106604646,LOC106611650 coding upstream 627245 141925 ~ 159457 (+)
wdr18 wdr18 coding downstream 44367 832241 ~ 854498 (+)
grin3bb grin3b coding downstream 98485 886359 ~ 955236 (+)
med16 med16 coding downstream 195777 983651 ~ 1009213 (+)
plppr3b NA coding downstream 222873 1010747 ~ 1025143 (+)
LOC120566171 LOC108248660 coding downstream 534531 1322405 ~ 1380914 (+)
G92018 LOC103369104,LOC104936604,LOC101078280 non-coding upstream 12745 722115 ~ 773957 (+)
G92022 LOC104936604,LOC103369104 non-coding upstream 18028 765454 ~ 768674 (+)
G92015 NA non-coding upstream 91952 694433 ~ 694750 (+)
G92013 NA non-coding upstream 101650 684735 ~ 685052 (+)
G91901 NA non-coding upstream 227889 557869 ~ 558813 (+)
G92027 NA non-coding downstream 28708 816582 ~ 818325 (+)
G92029 NA non-coding downstream 36700 824574 ~ 826046 (+)
G92062 NA non-coding downstream 72599 860473 ~ 860703 (+)
G92066 NA non-coding downstream 112347 900221 ~ 984045 (+)
G92093 NA non-coding downstream 176894 964768 ~ 965650 (+)
G92019 NA other upstream 27726 722373 ~ 758976 (+)
G91903 bmpr1a other upstream 192825 580807 ~ 593877 (+)
G91887 NA other upstream 220236 455709 ~ 566466 (+)
G91897 NA other upstream 243793 541691 ~ 542909 (+)
G91842 NA other upstream 444010 257904 ~ 342692 (+)
G92146 NA other downstream 380947 1168821 ~ 1170046 (+)
G92157 NA other downstream 415013 1202887 ~ 1204046 (+)
trmt13 NA other downstream 432936 1220810 ~ 1228679 (+)
G92169 dbt,LOC102778223 other downstream 453513 1241387 ~ 1256194 (+)
LOC120565410 camk4,LOC102194929,LOC102785978 other downstream 675845 1463719 ~ 1535856 (+)

Expression


Co-expression Network