si:ch211-129c21.1 (LOC103369187)


Basic Information

Item Value
gene id si:ch211-129c21.1
gene name LOC103369187
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 28146653 ~ 28169655 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811750.1
GCTCCCTGCAGGAATCAGACGCGGCGTGAACGTTACAGGTGTAGGACAGAGCGCCGAGCCGGGATCCCaggcagacaaaaaaaaatacagcagcAGTCTCAACGGTTTCTCATGTAGATCCTGAAAACTCCTGATATGTCCATCAAGATGATCTCCTCCAGTATTCATCACCAGTAGCTGGGCAGCATGGCTTCTGCTCCTCCTTCAAGAGAGGACACCAGTAGCTCATTAGCACTGCGCTGGAGGCTAACGCCGACATAGATACACAACCCGCAAGACACCGACTTCAAACTGAACCGAAATCAGGCTGAGCTGCACCCTCCCCCCACAGACCTGGTTAAACATACTTATGAACTGCCTTCAGAGGATGACTTGTGCCAGAGTGGCACATGTCCAGGACAGTGACATCACCACAGTGTGACAGCGGCAACATCTGTACTGAAACCTTGGACCATGTTCTGTCTCTGATCGGGTGCTTTGGTGGCAGAGCTGGACTGTGCAGCTCTTCCGCACTTAGACAAACCTGGACTCTGAGCCATGTCTTTTCTCTCAGCCCTGAGCATCGTCTGTGGATTGATGCTTCATGTTTCATTTAGTGCACTCAACACTCACTACTGTGTCCCACGAAAGACCGTCCCCTACCAGAACGAGCTGAAGTTGTTCAAAGAAGAGGGGATCTTCAACTACTCCACCATGCTAATGAGAGACGACTTGggtgtgctgctgctgggggCCAGAGAAGCCGTATATGCTCTGGACATCGACAACGTATCGGTCAAAAAGGCTGCGGTGTATTGGCGAGTTACCGAGGAGAAGCAGAGGGAGTGCTGGTACAAAGGAAAACATGCTGAGGTGGAATGCCGCAACTACATTCGAACCCTGCACAAAGTGAATGACACCacaatgtttgtgtgtggcacAAATGCTTTTAGCCCCTCCTGTGATTATATGACATTTGTTAATGGACAGCTGAGGCTGGAGGGAAAGCAGGAGGAGGGAAAGGGGAAGTGTCCTTTTGATCCCTTCCAGAGATACTCCTCCCTCATGGTTGGAAATGACCTGTATTCTGCTACATCCATCAACTTCTTGGGCTCTGAGCCGGTGGTTCTGCGCAGCTCAGACTTGGCTCTCCGCACTGCGTTTAAGAGCTCCTGGCTCAGTGAGCCAAACTTTGTCTACATGGACTTTGTGGGTGAGAGTTTTGGTAGTCcggatggtgatgatgataagGTGTACATGTTCTTCAGCGAGAATGCCATGGAGTACGACTTCTACAGCAAAGTTGCAGTGTCCCGAGTGGCCCGTGTCTGCAAGgGGGATATGGGCGGCCAGCGGACACTGCAGAGGAAATGGACGTCGTTCCTGAAAGCTCGTCTGGATTGTTCCCTCCCTGAACCCAGCCTGCCCCCCATTGTCCAGGATGTCTTCCTGCTTAAGGACGACGACTGGAGGAAGAGCGTCTTCTACGCTGTCTTCACTCCGCAGTCGAGCTTGTCCCAAGTCTCTGCAGTATGTGCATATAGTGTGTCGGCCATTCGAGATATTTTTAATGAGGGCAAGTTTAAGACACCCGTCGCTGTGGAGACATCTCACGTCAAGTGGGTGATGTAcactggagaggtgccagtccCCAGACCAGGAGCGTGCATCAATAGTGTGGCACGTCAAATGGGTATGAATCGCTCTCTGGACCTTCCAGACAAAACCCTCCAGTTCATTAGGGACCGCCCCCTTATGGACGAGGCTGTTCGCCCGCTGACGGGAGGGCCGCTTCTGCTCAAGAGGGGAGCTTTGCTGACTCGGATTGTCGTGGACAATGTGTTGGCGctggacagacagagatacgCCGTCATGTTCATTGGCACAGAAAACGGTTACGTTCAGAAGGCTGTCAGCTACGCTGGAGAGATGTTCATCATTGAGGAAATTCAACTGTATGAAAACCCAGTTGCTATTAGCATTCTGCGCCTCTCATCCAGCAAGGGCCAACTGTATGCAGGATCAGAGTTCGGTGCTATCCAGATGCCGGTCAGTAACTGCAGCCGCTACGACACCTGTGTGGACTGCATCCTGGCCAGGGATCCTTACTGTGCCTGGGACCTTGACACCCAGCAGTGCTCCTCAGTCTACAGCTTATCACCCCCCTCAAGTAATGCAATACAGAGTCTGAAGGAGGGAAACGTCGCACAATGTCCCCAGCCAGatccaGTAGCAGCTGTGGACGTTACCCTAGTTCCAGAAAACAATATCCAGCTGCCTTGCCAGCTCCACTCCAACTTGGCGCAGGTCCTGTGGCGATTCTCTGACCAAACACTTCACTCCAACAACAAATACTATATCTACAGCGGGGGCCTCCTCATCCTGAGTGCCTCTGAATCGGACGCTGGCCTGTACACCTGTGACTCGGTAGAGCTGATCAACGGCAGAGCATACAACCGGACTGCGGCGGTTTATCAATTACAGCTCTACTCTGGGGCTGGAGCGGGGGACCACACTACTCCTGGCAATCAGGTGACAAATTCCACAAACTCTATTCACAGTCTGACTACAGCTACACCAGGGCTGGTACCTCTGCCAGACGTGGTCAGCGAGGACCCGTTGTCTCCCGAGAGCCTAAGCAACACTAGCAGGGTAACTAATTTAGAGGTGGCGGTGGCTCTGCTCTCGCTGCTTTGTATCTCCCTGATGGGGGTCTTATTTTGGGTCTGGAGTCAGGGACGATGGGGATGCTTCAAGTTTGCGCAGCGCCCCAGTGAAAGCGAGCGGAAAAGGCAGTCAGCCGAATACATGCACATCCCGAATAGAACTTCAGAGATTAAGCTCCTGGGGCCTGAGTCTGGAAGACCTTGCAGTGCCAATAATAATCACTCTGCTGTTGACTTCAAAGGGAACGGGGAGCACCACTTCACACCTATGGCCAACATTTCAAGTCTGGACGGGCTGGGATACATAAATGATGAGTCAGAGATTTGACTCTGCTGAGGTATAGAATTCAGCCAAAGGCCTACAACAGTGCACTAATTATCTTCCTATAGATGTGCTGCTGTAGAAAAGGTCTTCACATTATAAATTCTTTTGATTGGCGTCATGTTTCTCCTTGCCAATTTCCTCCACTGTCTATCATTTCTGTTCtctggatgatgatgatgagactTATCAGGATTTCTGGTGGAATTTCACTCCAGGAATTAGTtgaaaagtcattttttttatatactgtatgtattttttgtacAATCATATACACTGTGTAATATATTGTGTACAGGTAAGAGCTTTTTTTTCCAACTACTATTTATTATGAACAAAGTTTTTATTTCAGCAATCATACTACTGTAAATAAGATCTTGTAAATAGTGTCAGCAACAGTGAACAAGTAGCAAACACTTTGACCTCTAATTTACAGGCAGATTTCATTTTATGGACTGTTTTATTCAAGACAACATTCATCAGCCAGAGAGCATACTGTCCGGTCTTTGGCTGTGGGGGTAATGATtgactcttttcggccggatgtccatcaccttccactttctttgtgttggaattctaaactccggtggatttatgaggactatggttaactgctcctcagatctctgcagggtaaatccagacagct
>XM_039811751.1
CCCTGCAGGAATCAGACGCGGCGTGAACGTTACAGGTGTAGGACAGAGCGCCGAGCCGGGATCCCaggcagacaaaaaaaaatacagcagcAGTCTCAACGGTTTCTCATGTAGATCCTGAAAACTCCTGCTGTAGAGCTCAACCTACAGCCCCACCCCCGCACCACCacaaccccccaacccccacgccaccccccaccctcacaGCCTGAGGGGGGAAAGGATGCAAGACATCGGTGCTCTGACAACAGATGAGCAGTCCTGTACATGCAGCAGCTCGTCCCGCTGTGTCAAGTAACAACAAGATATGTCCATCAAGATGATCTCCTCCAGTATTCATCACCAGTAGCTGGGCAGCATGGCTTCTGCTCCTCCTTCAAGAGAGGACACCAGTAGCTCATTAGCACTGCGCTGGAGGCTAACGCCGACATAGATACACAACCCGCAAGACACCGACTTCAAACTGAACCGAAATCAGGCTGAGCTGCACCCTCCCCCCACAGACCTGGTTAAACATACTTATGAACTGCCTTCAGAGGATGACTTGTGCCAGAGTGGCACATGTCCAGGACAGTGACATCACCACAGTGTGACAGCGGCAACATCTGTACTGAAACCTTGGACCATGTTCTGTCTCTGATCGGGTGCTTTGGTGGCAGAGCTGGACTGTGCAGCTCTTCCGCACTTAGACAAACCTGGACTCTGAGCCATGTCTTTTCTCTCAGCCCTGAGCATCGTCTGTGGATTGATGCTTCATGTTTCATTTAGTGCACTCAACACTCACTACTGTGTCCCACGAAAGACCGTCCCCTACCAGAACGAGCTGAAGTTGTTCAAAGAAGAGGGGATCTTCAACTACTCCACCATGCTAATGAGAGACGACTTGggtgtgctgctgctgggggCCAGAGAAGCCGTATATGCTCTGGACATCGACAACGTATCGGTCAAAAAGGCTGCGGTGTATTGGCGAGTTACCGAGGAGAAGCAGAGGGAGTGCTGGTACAAAGGAAAACATGCTGAGGTGGAATGCCGCAACTACATTCGAACCCTGCACAAAGTGAATGACACCacaatgtttgtgtgtggcacAAATGCTTTTAGCCCCTCCTGTGATTATATGACATTTGTTAATGGACAGCTGAGGCTGGAGGGAAAGCAGGAGGAGGGAAAGGGGAAGTGTCCTTTTGATCCCTTCCAGAGATACTCCTCCCTCATGGTTGGAAATGACCTGTATTCTGCTACATCCATCAACTTCTTGGGCTCTGAGCCGGTGGTTCTGCGCAGCTCAGACTTGGCTCTCCGCACTGCGTTTAAGAGCTCCTGGCTCAGTGAGCCAAACTTTGTCTACATGGACTTTGTGGGTGAGAGTTTTGGTAGTCcggatggtgatgatgataagGTGTACATGTTCTTCAGCGAGAATGCCATGGAGTACGACTTCTACAGCAAAGTTGCAGTGTCCCGAGTGGCCCGTGTCTGCAAGgGGGATATGGGCGGCCAGCGGACACTGCAGAGGAAATGGACGTCGTTCCTGAAAGCTCGTCTGGATTGTTCCCTCCCTGAACCCAGCCTGCCCCCCATTGTCCAGGATGTCTTCCTGCTTAAGGACGACGACTGGAGGAAGAGCGTCTTCTACGCTGTCTTCACTCCGCAGTCGAGCTTGTCCCAAGTCTCTGCAGTATGTGCATATAGTGTGTCGGCCATTCGAGATATTTTTAATGAGGGCAAGTTTAAGACACCCGTCGCTGTGGAGACATCTCACGTCAAGTGGGTGATGTAcactggagaggtgccagtccCCAGACCAGGAGCGTGCATCAATAGTGTGGCACGTCAAATGGGTATGAATCGCTCTCTGGACCTTCCAGACAAAACCCTCCAGTTCATTAGGGACCGCCCCCTTATGGACGAGGCTGTTCGCCCGCTGACGGGAGGGCCGCTTCTGCTCAAGAGGGGAGCTTTGCTGACTCGGATTGTCGTGGACAATGTGTTGGCGctggacagacagagatacgCCGTCATGTTCATTGGCACAGAAAACGGTTACGTTCAGAAGGCTGTCAGCTACGCTGGAGAGATGTTCATCATTGAGGAAATTCAACTGTATGAAAACCCAGTTGCTATTAGCATTCTGCGCCTCTCATCCAGCAAGGGCCAACTGTATGCAGGATCAGAGTTCGGTGCTATCCAGATGCCGGTCAGTAACTGCAGCCGCTACGACACCTGTGTGGACTGCATCCTGGCCAGGGATCCTTACTGTGCCTGGGACCTTGACACCCAGCAGTGCTCCTCAGTCTACAGCTTATCACCCCCCTCAAGTAATGCAATACAGAGTCTGAAGGAGGGAAACGTCGCACAATGTCCCCAGCCAGatccaGTAGCAGCTGTGGACGTTACCCTAGTTCCAGAAAACAATATCCAGCTGCCTTGCCAGCTCCACTCCAACTTGGCGCAGGTCCTGTGGCGATTCTCTGACCAAACACTTCACTCCAACAACAAATACTATATCTACAGCGGGGGCCTCCTCATCCTGAGTGCCTCTGAATCGGACGCTGGCCTGTACACCTGTGACTCGGTAGAGCTGATCAACGGCAGAGCATACAACCGGACTGCGGCGGTTTATCAATTACAGCTCTACTCTGGGGCTGGAGCGGGGGACCACACTACTCCTGGCAATCAGGTGACAAATTCCACAAACTCTATTCACAGTCTGACTACAGCTACACCAGGGCTGGTACCTCTGCCAGACGTGGTCAGCGAGGACCCGTTGTCTCCCGAGAGCCTAAGCAACACTAGCAGGGTAACTAATTTAGAGGTGGCGGTGGCTCTGCTCTCGCTGCTTTGTATCTCCCTGATGGGGGTCTTATTTTGGGTCTGGAGTCAGGGACGATGGGGATGCTTCAAGTTTGCGCAGCGCCCCAGTGAAAGCGAGCGGAAAAGGCAGTCAGCCGAATACATGCACATCCCGAATAGAACTTCAGAGATTAAGCTCCTGGGGCCTGAGTCTGGAAGACCTTGCAGTGCCAATAATAATCACTCTGCTGTTGACTTCAAAGGGAACGGGGAGCACCACTTCACACCTATGGCCAACATTTCAAGTCTGGACGGGCTGGGATACATAAATGATGAGTCAGAGATTTGACTCTGCTGAGGTATAGAATTCAGCCAAAGGCCTACAACAGTGCACTAATTATCTTCCTATAGATGTGCTGCTGTAGAAAAGGTCTTCACATTATAAATTCTTTTGATTGGCGTCATGTTTCTCCTTGCCAATTTCCTCCACTGTCTATCATTTCTGTTCtctggatgatgatgatgagactTATCAGGATTTCTGGTGGAATTTCACTCCAGGAATTAGTtgaaaagtcattttttttatatactgtatgtattttttgtacAATCATATACACTGTGTAATATATTGTGTACAGGTAAGAGCTTTTTTTTCCAACTACTATTTATTATGAACAAAGTTTTTATTTCAGCAATCATACTACTGTAAATAAGATCTTGTAAATAGTGTCAGCAACAGTGAACAAGTAGCAAACACTTTGACCTCTAATTTACAGGCAGATTTCATTTTATGGACTGTTTTATTCAAGACAACATTCATCAGCCAGAGAGCATACTGTCCGGTCTTTGGCTGTGGGGGTAATGATtgactcttttcggccggatgtccatcaccttccactttctttgtgttggaattctaaactccggtggatttatgaggactatggttaactgctcctcagatctctgcagggtaaatccagacagct

Function

NR:

description
semaphorin-4E-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811750.1 False 3622 mRNA 0.50 14 28146653 28169655
XM_039811751.1 True 3794 mRNA 0.50 15 28146656 28169655

Neighbor

gene id symbol gene type direction distance location
LOC120564863 NA coding upstream 19422 28111585 ~ 28127231 (+)
march2 march2 coding upstream 47848 28090705 ~ 28098805 (+)
LOC120564862 LOC104939946,LOC103370860,LOC101073928,LOC105932471,LOC103155165 coding upstream 56069 28085890 ~ 28090584 (+)
gpx4a gpx4 coding upstream 119415 28021945 ~ 28027238 (+)
arhgap45b arhgap45 coding upstream 128965 28000091 ~ 28017688 (+)
chaf1a chaf1a coding downstream 9813 28179468 ~ 28192130 (+)
uap1 uap1 coding downstream 35837 28205492 ~ 28218081 (+)
ddr2a ddr2 coding downstream 48547 28218202 ~ 28253130 (+)
hsd17b7 hsd17b7,LOC100698819 coding downstream 83640 28253295 ~ 28257604 (+)
serbp1a LOC106917776,LOC106949688,LOC103463733,LOC104930792 coding downstream 91400 28261055 ~ 28269639 (+)
G98770 LOC104966597,LOC101073477 non-coding upstream 264342 27879317 ~ 27882311 (+)
G98766 hapln4 non-coding upstream 287530 27855676 ~ 27859123 (+)
G98763 NA non-coding upstream 297715 27848733 ~ 27848938 (+)
G98723 NA non-coding upstream 559545 27586425 ~ 27587108 (+)
G98685 NA non-coding upstream 647766 27498223 ~ 27498887 (+)
G98972 NA non-coding downstream 142939 28312594 ~ 28318888 (+)
LOC120565132 NA non-coding downstream 279888 28449543 ~ 28460210 (+)
G99007 hook1,LOC102781169,LOC106584290 non-coding downstream 399993 28569648 ~ 28570858 (+)
G99108 NA non-coding downstream 518227 28687882 ~ 28688118 (+)
G99189 NA non-coding downstream 800832 28970487 ~ 28972086 (+)
LOC120564865 NA other upstream 328 28137269 ~ 28146325 (+)
pip5k1ca pip5k1c,LOC106917759,LOC106949671,LOC107393349,LOC103370870 other upstream 62266 28027964 ~ 28084387 (+)
ncanb ncan,LOC104966594,LOC107554802 other upstream 313798 27659696 ~ 27832855 (+)
si:ch211-212d10.2 LOC103371119,LOC104950605,LOC100693321,LOC101487565,LOC102778050 other upstream 769599 27372809 ~ 27377054 (+)
micos13 LOC104918748,LOC103371279,LOC104964520,LOC106536194 other upstream 1350366 26791729 ~ 26796287 (+)
LOC120565530 LOC100702602,LOC101154857,LOC107096371,LOC105928898,LOC101076602,LOC108230771 other downstream 602707 28772362 ~ 28774553 (+)
ralgps2 ralgps2 other downstream 605720 28775375 ~ 28865487 (+)
G99297 NA other downstream 1493978 29663633 ~ 29665090 (+)
si:ch73-389b16.1 ccdc18 other downstream 2257848 30427503 ~ 30429291 (+)
G99545 NA other downstream 2640863 30810518 ~ 30811236 (+)

Expression


Co-expression Network