LOC120565764 (LOC103367403)


Basic Information

Item Value
gene id LOC120565764
gene name LOC103367403
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 22485511 ~ 22491235 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811777.1
ttatgttattattgtgATCTTGTTCTCAGGGCCTAAGCGGTTTGGATGGGTTACTAGGGGTTGAGGGTAATGAAGGAGATCCGGGTGATATTGGTTTCAGAGGAGCTCCTGGAACACCTGGCAGGCCTGGCAAAATGGGAAACCCTGGATCCCCTGGGATCAGTGGGAACACTGGAGCACAAGGGTTCAAGGGTAAAGCTGGACCAAAAGGAAAAGGACCACCTGGACCAATGGGGCCAAAGGGTATTCCAGGACTGAGAGGAGAGAAGGGCGAGTCTGCAATTAATGGTCCAAAGGGTCTCCTTGGTGACATGGGAACACCAGGACCAATCGGACCACCTGGGCTAAAGGGGAATCCTGGTTTGCAGGGCCTGAAAGGCCAAAGAGGTCATAAGGGAAAGCAGGGGGATACTGGTCCTCCTGGGCCAAGGGGGCGAAAAGGCTTTCTTGGACTCACCGGTCAGCTTGGAAAGAAGGGAATGAAAGGTGTCCAAGGCAGGAGAGGACCAAAGGGAGTGAAGGGCAAGCATGGACATCCAGGAAAACCAGGTGCACCAGGCAAGCGCAGGCATACACAAAGGCAGGGATCAGGCCCTGAGCCAAAACCAGGTCAAGGAAATGAGCTAAGGCCAAAAACAAGACCCAGTACAAgatcaaaactgaaaaatgtgcCAAGATCAAGACAAACACCCAGCCTCCTGAAGCTAAGGGAAGGACAACAAAAATGGCCCAGGCCAGTGTCCAGGAGATGGTCTGAAGTAGATGAGGCTGAGGAATCCTTCAGCTGGCCGCAGGGAACTAAAGACGATCCTGCCACCACCTGCTACGAGCTGGGACTCTTACACCCACATCTGAATGATGGTTACTTTTACATGGACCCCAACCAAGGCTGTCCCTATGATGCTGTGAAGGTATTCTGTAACTTCACAGCAGGAGGAACAACCTGCATTGACCCTTTGCAGTCTCAGATTAAATTACGTTGGGAACCAGTAAAGAAGAAATCAAAAACGTCTGTCCAGTGGTTTAGTCAGCAGCACGGTGAAAACAAGTTTGAGTATGCTGGTGTGGATGTTGTCCAGCTGAGGTTTCTGCGGTTACACAGCCACACATCTTTCCAGAACATGACTGTCAGGTGTACAGCAAACTACTCCAGTACTGCTGGAACAACCCATTCAGCCAACAGGATTATTCACTTCCTGGGAGACTCTGGCAAAGAAATCCTTTCACACCTAACCACAGTGTACAGGAAAGGCTGTGAGGCAGAGGTGGTTGTAATGGTTCGGGGGAGCACGGAGCTGCATCGAGGCGATATGGAGTTACTTCCTGTCAGAGATCTGGGTGTAGATATGAGGTCGCTATCTCCCCTTGTCCCGGAAATCACTGTTGTTTTGGGACCCCTCTGCTTTTGTGAcctatgctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtgtgcgtgtgtgatatAATGAACTGTAaatatctcttttatataaaaagCAGGGATATACTGTGTCTAGATATTTTGTTAGGATTAATTTGCTCAGTGCtgttttgtgtatatttatTGAATTATCACAAGCTGAATGAATTGTTAGAATGTATTATATGAAGCAGTATATACATTGGTATCTAATGTTTATGTAGCACctaattttatttgttttaatgaaaTTGACTCAGAAGTAAGTGTTTATATCACAACTCAATGTATATGGTGTCTCATCATCCTCACAGGGGGAGGATGTACAgcactatcaaaataaaagtatgacTTTGAACATGTGGAATAAAATCTAGC
>XR_005640282.1
ttatgttattattgtgATCTTGTTCTCAGGGCCTAAGCGGTTTGGATGGGTTACTAGGGGTTGAGGGTAATGAAGGAGATCCGGGTGATATTGGTTTCAGAGGAGCTCCTGGAACACCTGGCAGGCCTGGCAAAATGGGAAACCCTGGATCCCCTGGGATCAGTGGGAACACTGGAGCACAAGGGTTCAAGGGTAAAGCTGGACCAAAAGGAAAAGGACCACCTGGACCAATGGGGCCAAAGGGTATTCCAGGACTGAGAGGAGAGAAGGGCGAGTCTGCAATTAATGGTCCAAAGGGTCTCCTTGGTGACATGGGAACACCAGGACCAATCGGACCACCTGGGCTAAAGGGGAATCCTGGTTTGCAGGGCCTGAAAGGCCAAAGAGGTCATAAGGGAAAGCAGGGGGATACTGGTCCTCCTGGGCCAAGGGGGCGAAAAGGCTTTCTTGGACTCACCGGTCAGCTTGGAAAGAAGGGAATGAAAGGTGTCCAAGGCAGGAGAGGACCAAAGGGAGTGAAGGGCAAGCATGGACATCCAGGAAAACCAGGTGCACCAGGCAAGCGCAGGCATACACAAAGGCAGGGATCAGGCCCTGAGCCAAAACCAGGTCAAGGAAATGAGCTAAGGCCAAAAACAAGACCCAGTACAAgatcaaaactgaaaaatgtgcCAAGATCAAGACAAACACCCAGCCTCCTGAAGCTAAGGGAAGGACAACAAAAAGTTGTGGCCCAGGCCAGTGTCCAGGAGATGGTCTGAAGTAGATGAGGCTGAGGAATCCTTCAGCTGGCCGCAGGGAACTAAAGACGATCCTGCCACCACCTGCTACGAGCTGGGACTCTTACACCCACATCTGAATGATGGTTACTTTTACATGGACCCCAACCAAGGCTGTCCCTATGATGCTGTGAAGGTATTCTGTAACTTCACAGCAGGAGGAACAACCTGCATTGACCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811777.1 True 1840 mRNA 0.47 16 22485511 22491235
XR_005640282.1 False 960 transcript 0.52 13 22485511 22488103

Neighbor

gene id symbol gene type direction distance location
si:dkey-21p1.3 NA coding upstream 351 22458461 ~ 22485160 (+)
LOC120564914 cacna1e,LOC103367400,LOC102302220,LOC102196101,LOC101487658 coding upstream 31514 22360531 ~ 22453997 (+)
acbd6 acbd6,LOC106907417,LOC103138489 coding upstream 226400 22229405 ~ 22259111 (+)
sin3b sin3b,LOC102797688 coding upstream 331178 22134681 ~ 22154333 (+)
haus5 haus5,LOC102794657 coding upstream 351174 22124524 ~ 22134337 (+)
abl2 abl2 coding downstream 10313 22501548 ~ 22529009 (+)
osbpl9 osbpl9 coding downstream 38852 22530087 ~ 22570300 (+)
tor3a tor3a coding downstream 85962 22577197 ~ 22582655 (+)
calr LOC102308154,LOC102192544,LOC101484884,LOC100701980,LOC107393148,LOC108230540 coding downstream 92971 22584206 ~ 22589319 (+)
eps15 LOC103370402 coding downstream 100408 22591643 ~ 22623535 (+)
G97338 NA non-coding upstream 162656 22322492 ~ 22322855 (+)
G97335 NA non-coding upstream 169153 22313648 ~ 22316358 (+)
G97297 NA non-coding upstream 311118 22158057 ~ 22174393 (+)
G97295 NA non-coding upstream 327553 22156111 ~ 22157958 (+)
G97263 NA non-coding upstream 392137 22091389 ~ 22093374 (+)
G97410 NA non-coding downstream 103261 22594496 ~ 22595277 (+)
LOC120565733 NA non-coding downstream 289372 22780607 ~ 22800145 (+)
G97485 elavl4,LOC107657884 non-coding downstream 374592 22865827 ~ 22870448 (+)
G97489 NA non-coding downstream 423281 22914516 ~ 22918731 (+)
G97537 NA non-coding downstream 832737 23323972 ~ 23324176 (+)
G97321 NA other upstream 198239 22283646 ~ 22287272 (+)
G97093 NA other upstream 703511 21690897 ~ 21782000 (+)
lsm7 lsm7,LOC102793261 other upstream 927780 21554894 ~ 21557731 (+)
LOC120565275 ctxn1,LOC108166259,LOC106954365,LOC103138526,LOC104947303,LOC105353898 other upstream 1043953 21411336 ~ 21441558 (+)
prkacba prkacb other upstream 1920687 20548999 ~ 20564824 (+)
soat1 soat1,LOC102796196 other downstream 1722 22492957 ~ 22501015 (+)
LOC120566218 NA other downstream 80519 22571754 ~ 22576548 (+)
LOC120566227 NA other downstream 81234 22572469 ~ 22572551 (+)
LOC120566222 NA other downstream 81488 22572723 ~ 22572804 (+)
LOC120566219 NA other downstream 81932 22573167 ~ 22573247 (+)

Expression


Co-expression Network