LOC120565788 (LOC100695038,LOC103366337,LOC107380922,LOC107082714,LOC105918713,LOC105028844,LOC106604646,LOC106611650)


Basic Information

Item Value
gene id LOC120565788
gene name LOC100695038,LOC103366337,LOC107380922,LOC107082714,LOC105918713,LOC105028844,LOC106604646,LOC106611650
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 141925 ~ 159457 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039811808.1
ctctcaggaGGTGCTGTTGAAGCGAGCAGCCGACCTGGTTGAGGCTCTCTATGGGATGCCCCACAACAATCAGGAGATCATCCTGAAGCGAGCGGCCGACCTCACCGAGGCGCTCTACAGCGTCCCCCGCAGCCACAACCAGCTGCCGTCCCTCACCGGCTCTGCCGCGCACTCGGGGATGATGGGAGTCAACTCGTTCAGCAGCCAGCTCGCCGTCAACATCTCCGAGGCCTCGCAGGCCGACCAGGGTTACTCCCGTAACTCGAACAGCGTGTCTCCTCGCGGCTACGTGCCGACCTCCACGCCTCAGCAGTCCAACTACAACACCATCACGTCCACCATGAACGGATACGGAGCCGGGATGACCAACCTGGGCGTGCCCGGGTCCCCCAGCTTCCTCAACGGCTCCACCAACTCTGCTTACGCAACGATGGCCGGTCTCATCGTGCCGCCCATGTGATGACCCAATCAGACCCCCCTGTTCCCCCCTTCCTCTGGCCCCGCCCACctgaaacgccacaacaacaacaacaacaacaacaacaacaacagcagcagcagcgtaaAATCCTTCCCATCATGCCCCGGGACCGACCCATAATCCATCAAAACCACGGACTCTCCATCCATTCGTGCTCCCCTCTGaagggggtcaaaggtcaaaaggtcagcGGTGGA

Function

NR:

description
PREDICTED: transcription factor COE3 isoform X3

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0007275 multicellular organism development biological_process
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039811808.1 True 678 mRNA 0.61 4 141925 159457

Neighbor

gene id symbol gene type direction distance location
stx6 stx6 coding downstream 624742 784199 ~ 808239 (+)
LOC120565732 NA coding downstream 627245 786702 ~ 787874 (+)
wdr18 wdr18 coding downstream 672784 832241 ~ 854498 (+)
grin3bb grin3b coding downstream 726902 886359 ~ 955236 (+)
med16 med16 coding downstream 824194 983651 ~ 1009213 (+)
G91829 NA non-coding upstream 3368 92274 ~ 138557 (+)
G91843 NA non-coding downstream 37139 196596 ~ 244841 (+)
G91857 NA non-coding downstream 124941 284398 ~ 290696 (+)
G91862 NA non-coding downstream 171012 330469 ~ 331021 (+)
G91866 NA non-coding downstream 204953 364410 ~ 447169 (+)
G91877 NA non-coding downstream 248330 407787 ~ 452499 (+)
G91842 NA other downstream 98447 257904 ~ 342692 (+)
G91887 NA other downstream 296252 455709 ~ 566466 (+)
G91897 NA other downstream 382234 541691 ~ 542909 (+)
G91903 bmpr1a other downstream 421350 580807 ~ 593877 (+)
G92019 NA other downstream 562916 722373 ~ 758976 (+)

Expression


Co-expression Network